Gene annotation
Transcriptome id Sobic.001G160000.5,Sobic.001G160000.1,Sobic.001G160000.6,Sobic.001G160000.2,Sobic.001G160000.4,Sobic.001G160000.3
Synonym ATNEK3, Sb01g013950, NEK3
Functional annotation LSTK-1-like kinase, putative, expressed
UniProt A0A1B6QJ95 , A0A1Z5S5W5
Pfam PF14531
Panther DB PTHR24362 PTHR24362:SF218 PTHR24362 PTHR24362:SF255
NCBI CDD KOG0589; Serine/threonine protein kinase
KEGG Orthology K08857; NIMA (never in mitosis gene a)-related kinase 1/4/5
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G04810 : NIMA-related kinase 2
RAP-DB (Rice) LOC_Os12g41180.1 : LSTK-1-like kinase, putative, expressed
MaizeGDB (Corn) Zm00025a025305 , Zm00025a017279 , Zm00025a004607
Brachypodium KQK14053 , KQK14052 , KQK14051 , KQK14055 , KQK14054 , PNT74400 , PNT74399 , PNT74398 , PNT74397 , PNT62368 , KQJ85917 , KQJ85916 , KQJ85918
Barley HORVU5Hr1G013260.19 , HORVU5Hr1G013260.18 , HORVU5Hr1G013260.13 , HORVU5Hr1G013260.12 , HORVU5Hr1G013260.11 , HORVU5Hr1G013260.10 , HORVU5Hr1G013260.17 , HORVU5Hr1G013260.16 , HORVU5Hr1G013260.15 , HORVU5Hr1G013260.14 , HORVU5Hr1G013260.22 , HORVU5Hr1G013260.23 , HORVU5Hr1G013260.20 , HORVU5Hr1G013260.21 , HORVU5Hr1G013260.26 , HORVU5Hr1G013260.24 , HORVU5Hr1G013260.25 , HORVU6Hr1G011790.2 , HORVU6Hr1G011790.5 , HORVU5Hr1G013260.3 , HORVU5Hr1G013260.2 , HORVU5Hr1G013260.1 , HORVU5Hr1G013260.4 , HORVU6Hr1G011790.3 , HORVU6Hr1G011790.16 , HORVU5Hr1G013260.9 , HORVU5Hr1G013260.8 , HORVU5Hr1G013260.7 , HORVU6Hr1G011790.18 , HORVU6Hr1G011790.12 , HORVU6Hr1G011790.13 , HORVU6Hr1G011790.14 , HORVU6Hr1G011790.15 , HORVU6Hr1G011790.17 , HORVU6Hr1G011790.24 , HORVU6Hr1G011790.21 , HORVU6Hr1G011790.20 , HORVU6Hr1G011790.23 , HORVU6Hr1G011790.22 , HORVU5Hr1G013260.6 , HORVU5Hr1G013260.5
Wheat TraesCS5B02G061800 , TraesCS6B02G084500 , TraesCS6B02G084500 , TraesCS6B02G084500 , TraesCS6B02G084500 , TraesCS5A02G054700 , TraesCS5D02G065900 , TraesCS6A02G063300 , TraesCS6A02G063300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G187000 leucine-rich repeat family protein, putative, expressed -
2 Sobic.008G190000 leucine-rich repeat family protein, putative, expressed -
3 Sobic.003G366000 DUF623 domain containing protein, expressed -
4 Sobic.001G381100 receptor-like protein kinase precursor, putative, expressed -
5 Sobic.005G092700 expressed protein -
6 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
7 Sobic.001G075700 AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
8 Sobic.001G267100 "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
9 Sobic.005G091000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
10 Sobic.009G137500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
11 Sobic.001G046400 expressed protein -
12 Sobic.006G074900 heat shock protein-related, putative, expressed -
13 Sobic.004G302700 YABBY domain containing protein, putative, expressed -
14 Sobic.009G060800 carboxyl-terminal proteinase, putative, expressed -
15 Sobic.006G105600 "domain confirmed by Pfam database, expression is supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
16 Sobic.003G089300 heavy-metal-associated domain-containing protein, putative, expressed -
17 Sobic.010G241100 thaumatin family domain containing protein, expressed -
18 Sobic.007G211200 inactive receptor kinase At2g26730 precursor, putative, expressed -
19 Sobic.001G390400 expressed protein -
20 Sobic.003G283900 leucine-rich repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic001G160000 Sobic001G160000 Sobic006G187000 Sobic006G187000 Sobic001G160000--Sobic006G187000 Sobic008G190000 Sobic008G190000 Sobic001G160000--Sobic008G190000 Sobic003G366000 Sobic003G366000 Sobic001G160000--Sobic003G366000 Sobic001G381100 Sobic001G381100 Sobic001G160000--Sobic001G381100 Sobic005G092700 Sobic005G092700 Sobic001G160000--Sobic005G092700 Sobic010G192500 Sobic010G192500 Sobic001G160000--Sobic010G192500 Sobic001G075700 Sobic001G075700 Sobic001G160000--Sobic001G075700 Sobic001G267100 Sobic001G267100 Sobic001G160000--Sobic001G267100 Sobic005G091000 Sobic005G091000 Sobic001G160000--Sobic005G091000 Sobic008G150500 Sobic008G150500 Sobic006G187000--Sobic008G150500 Sobic009G137500 Sobic009G137500 Sobic006G187000--Sobic009G137500 Sobic001G046400 Sobic001G046400 Sobic006G187000--Sobic001G046400 Sobic006G187000--Sobic003G366000 Sobic004G302700 Sobic004G302700 Sobic006G187000--Sobic004G302700 Sobic006G187000--Sobic001G160000 Sobic003G016200 Sobic003G016200 Sobic006G187000--Sobic003G016200 Sobic003G283900 Sobic003G283900 Sobic006G187000--Sobic003G283900 Sobic006G187000--Sobic001G267100 Sobic008G190000--Sobic001G381100 Sobic008G190000--Sobic005G092700 Sobic008G190000--Sobic001G160000 Sobic010G024500 Sobic010G024500 Sobic008G190000--Sobic010G024500 Sobic008G190000--Sobic003G366000 Sobic008G042200 Sobic008G042200 Sobic008G190000--Sobic008G042200 Sobic002G286700 Sobic002G286700 Sobic008G190000--Sobic002G286700 Sobic009G200000 Sobic009G200000 Sobic008G190000--Sobic009G200000 Sobic004G115700 Sobic004G115700 Sobic008G190000--Sobic004G115700 Sobic006G110850 Sobic006G110850 Sobic003G366000--Sobic006G110850 Sobic003G366000--Sobic006G187000 Sobic009G060800 Sobic009G060800 Sobic003G366000--Sobic009G060800 Sobic003G366000--Sobic004G302700 Sobic003G366000--Sobic010G192500 Sobic001G390400 Sobic001G390400 Sobic003G366000--Sobic001G390400 Sobic003G366000--Sobic001G160000 Sobic003G366000--Sobic001G046400 Sobic003G366000--Sobic008G190000 Sobic001G381100--Sobic008G190000 Sobic001G381100--Sobic001G160000 Sobic001G074100 Sobic001G074100 Sobic001G381100--Sobic001G074100 Sobic006G074900 Sobic006G074900 Sobic001G381100--Sobic006G074900 Sobic001G381100--Sobic005G092700 Sobic004G168600 Sobic004G168600 Sobic001G381100--Sobic004G168600 Sobic001G381100--Sobic010G024500 Sobic006G241800 Sobic006G241800 Sobic001G381100--Sobic006G241800 Sobic001G381100--Sobic003G366000 Sobic005G092700--Sobic008G190000 Sobic005G092700--Sobic008G042200 Sobic005G092700--Sobic009G200000 Sobic005G092700--Sobic004G115700 Sobic005G092700--Sobic003G366000 Sobic005G092700--Sobic001G381100 Sobic005G092700--Sobic001G160000 Sobic005G092700--Sobic001G390400 Sobic005G092700--Sobic001G075700 Sobic010G192500--Sobic009G060800 Sobic003G089300 Sobic003G089300 Sobic010G192500--Sobic003G089300 Sobic002G337600 Sobic002G337600 Sobic010G192500--Sobic002G337600 Sobic010G192500--Sobic003G366000 Sobic010G241100 Sobic010G241100 Sobic010G192500--Sobic010G241100 Sobic001G155700 Sobic001G155700 Sobic010G192500--Sobic001G155700 Sobic001G493900 Sobic001G493900 Sobic010G192500--Sobic001G493900 Sobic002G319300 Sobic002G319300 Sobic010G192500--Sobic002G319300 Sobic009G208300 Sobic009G208300 Sobic010G192500--Sobic009G208300 Sobic001G075700--Sobic001G160000 Sobic001G075700--Sobic005G092700 Sobic001G075700--Sobic008G042200 Sobic001G075700--Sobic008G190000 Sobic005G125300 Sobic005G125300 Sobic001G075700--Sobic005G125300 Sobic001G075700--Sobic004G302700 Sobic001G075700--Sobic009G200000 Sobic001G075700--Sobic006G187000 Sobic001G075700--Sobic003G366000 Sobic001G267100--Sobic006G187000 Sobic001G267100--Sobic005G091000 Sobic001G145200 Sobic001G145200 Sobic001G267100--Sobic001G145200 Sobic006G105600 Sobic006G105600 Sobic001G267100--Sobic006G105600 Sobic001G267100--Sobic009G137500 Sobic001G267100--Sobic001G381100 Sobic001G345200 Sobic001G345200 Sobic001G267100--Sobic001G345200 Sobic001G267100--Sobic004G168600 Sobic001G267100--Sobic006G074900 Sobic002G032500 Sobic002G032500 Sobic005G091000--Sobic002G032500 Sobic005G091000--Sobic006G105600 Sobic005G091000--Sobic001G267100 Sobic003G309400 Sobic003G309400 Sobic005G091000--Sobic003G309400 Sobic005G091000--Sobic003G089300 Sobic003G338200 Sobic003G338200 Sobic005G091000--Sobic003G338200 Sobic005G091000--Sobic001G381100 Sobic002G224200 Sobic002G224200 Sobic005G091000--Sobic002G224200 Sobic005G091000--Sobic006G074900
Octagon: transcription factors


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