Gene annotation
Transcriptome id Sobic.001G267100.1
Synonym influx carriers auxin resistant 1/like aux1, SbLAX1, Sb01g026240, LAX2
Functional annotation "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by BR and ABA treatments" (PubMedID : 20528920)
transmembrane amino acid transporter protein, putative, expressed
UniProt C5WP27
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF317
NCBI CDD KOG1303; Amino acid transporters
KEGG Orthology K13946; AUX1, auxin influx carrier (AUX1 LAX family)
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G21050 : like AUXIN RESISTANT 2
RAP-DB (Rice) LOC_Os10g05690.1 : transmembrane amino acid transporter protein, putative, expressed
MaizeGDB (Corn) Zm00025a043787 , Zm00025a003791 , Zm00025a026807 , Zm00025a033966 , Zm00025a001545
Brachypodium KQK10644 , KQK10645 , KQJ96114 , KQK22608
Barley HORVU4Hr1G063650.2 , HORVU1Hr1G073490.6 , HORVU1Hr1G073490.7 , HORVU1Hr1G073490.4 , HORVU1Hr1G073490.5 , HORVU1Hr1G073490.2 , HORVU1Hr1G073490.1 , HORVU1Hr1G073490.8 , HORVU1Hr1G073490.9 , HORVU4Hr1G019930.1 , HORVU4Hr1G019930.2 , HORVU4Hr1G019930.3 , HORVU4Hr1G019930.4 , HORVU4Hr1G019930.5 , HORVU3Hr1G084750.1 , HORVU3Hr1G084750.3 , HORVU3Hr1G084750.5 , HORVU3Hr1G084750.4 , HORVU3Hr1G084750.7 , HORVU3Hr1G084750.6 , HORVU6Hr1G031510.1 , HORVU1Hr1G016700.3 , HORVU1Hr1G016700.2 , HORVU1Hr1G016700.1 , HORVU4Hr1G063650.4 , HORVU4Hr1G063650.5 , HORVU4Hr1G063650.6 , HORVU4Hr1G063650.7 , HORVU4Hr1G063650.1 , HORVU4Hr1G063650.3 , HORVU4Hr1G063650.8 , HORVU3Hr1G084750.2
Wheat TraesCS3A02G369200 , TraesCS1D02G277600 , TraesCS4D02G227200 , TraesCS3B02G401000 , TraesCS3D02G362100 , TraesCS4D02G108800 , TraesCS4B02G226500 , TraesCS1B02G095900 , TraesCS4A02G207600 , TraesCS1A02G278400 , TraesCS1A02G077800 , TraesCS4B02G111100 , TraesCS1D02G079900 , TraesCS4A02G070500 , TraesCS1B02G287300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G187000 leucine-rich repeat family protein, putative, expressed -
2 Sobic.005G091000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
3 Sobic.001G145200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
4 Sobic.006G105600 "domain confirmed by Pfam database, expression is supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
5 Sobic.009G137500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.001G381100 receptor-like protein kinase precursor, putative, expressed -
7 Sobic.001G345200 OsFBX94 - F-box domain containing protein, expressed -
8 Sobic.004G168600 heat shock protein-related, putative, expressed -
9 Sobic.006G074900 heat shock protein-related, putative, expressed -
10 Sobic.007G050500 MYB family transcription factor, putative, expressed -
11 Sobic.001G160000 LSTK-1-like kinase, putative, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
12 Sobic.006G255300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@auxin response factor, putative, expressed K14486: K14486, auxin response factor
13 Sobic.008G190000 leucine-rich repeat family protein, putative, expressed -
14 Sobic.002G224200 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
15 Sobic.001G276800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
16 Sobic.003G366000 DUF623 domain containing protein, expressed -
17 Sobic.003G309400 OsSub4 - Putative Subtilisin homologue, expressed -
18 Sobic.005G187000 cyclin-dependent kinase inhibitor, putative, expressed -
19 Sobic.005G098400 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@OsIAA27 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
20 Sobic.003G338200 receptor-like protein kinase precursor, putative, expressed -


Gene co-expression network
sample Sobic001G267100 Sobic001G267100 Sobic006G187000 Sobic006G187000 Sobic001G267100--Sobic006G187000 Sobic005G091000 Sobic005G091000 Sobic001G267100--Sobic005G091000 Sobic001G145200 Sobic001G145200 Sobic001G267100--Sobic001G145200 Sobic006G105600 Sobic006G105600 Sobic001G267100--Sobic006G105600 Sobic009G137500 Sobic009G137500 Sobic001G267100--Sobic009G137500 Sobic001G381100 Sobic001G381100 Sobic001G267100--Sobic001G381100 Sobic001G345200 Sobic001G345200 Sobic001G267100--Sobic001G345200 Sobic004G168600 Sobic004G168600 Sobic001G267100--Sobic004G168600 Sobic006G074900 Sobic006G074900 Sobic001G267100--Sobic006G074900 Sobic008G150500 Sobic008G150500 Sobic006G187000--Sobic008G150500 Sobic006G187000--Sobic009G137500 Sobic001G046400 Sobic001G046400 Sobic006G187000--Sobic001G046400 Sobic003G366000 Sobic003G366000 Sobic006G187000--Sobic003G366000 Sobic004G302700 Sobic004G302700 Sobic006G187000--Sobic004G302700 Sobic001G160000 Sobic001G160000 Sobic006G187000--Sobic001G160000 Sobic003G016200 Sobic003G016200 Sobic006G187000--Sobic003G016200 Sobic003G283900 Sobic003G283900 Sobic006G187000--Sobic003G283900 Sobic006G187000--Sobic001G267100 Sobic002G032500 Sobic002G032500 Sobic005G091000--Sobic002G032500 Sobic005G091000--Sobic006G105600 Sobic005G091000--Sobic001G267100 Sobic003G309400 Sobic003G309400 Sobic005G091000--Sobic003G309400 Sobic003G089300 Sobic003G089300 Sobic005G091000--Sobic003G089300 Sobic003G338200 Sobic003G338200 Sobic005G091000--Sobic003G338200 Sobic005G091000--Sobic001G381100 Sobic002G224200 Sobic002G224200 Sobic005G091000--Sobic002G224200 Sobic005G091000--Sobic006G074900 Sobic001G145200--Sobic001G267100 Sobic001G145200--Sobic001G381100 Sobic001G145200--Sobic006G074900 Sobic001G145200--Sobic004G168600 Sobic008G190000 Sobic008G190000 Sobic001G145200--Sobic008G190000 Sobic006G255300 Sobic006G255300 Sobic001G145200--Sobic006G255300 Sobic001G145200--Sobic001G345200 Sobic001G145200--Sobic001G160000 Sobic005G092700 Sobic005G092700 Sobic001G145200--Sobic005G092700 Sobic006G105600--Sobic005G091000 Sobic006G105600--Sobic001G267100 Sobic006G124400 Sobic006G124400 Sobic006G105600--Sobic006G124400 Sobic002G296000 Sobic002G296000 Sobic006G105600--Sobic002G296000 Sobic006G105600--Sobic009G137500 Sobic002G394500 Sobic002G394500 Sobic006G105600--Sobic002G394500 Sobic004G233700 Sobic004G233700 Sobic006G105600--Sobic004G233700 Sobic008G083500 Sobic008G083500 Sobic006G105600--Sobic008G083500 Sobic001G304800 Sobic001G304800 Sobic006G105600--Sobic001G304800 Sobic009G137500--Sobic006G187000 Sobic009G137500--Sobic001G267100 Sobic009G137500--Sobic006G105600 Sobic009G137500--Sobic006G255300 Sobic009G137500--Sobic003G366000 Sobic009G137500--Sobic003G016200 Sobic001G276800 Sobic001G276800 Sobic009G137500--Sobic001G276800 Sobic009G137500--Sobic008G150500 Sobic009G137500--Sobic001G046400 Sobic001G381100--Sobic008G190000 Sobic001G381100--Sobic001G160000 Sobic001G074100 Sobic001G074100 Sobic001G381100--Sobic001G074100 Sobic001G381100--Sobic006G074900 Sobic001G381100--Sobic005G092700 Sobic001G381100--Sobic004G168600 Sobic010G024500 Sobic010G024500 Sobic001G381100--Sobic010G024500 Sobic006G241800 Sobic006G241800 Sobic001G381100--Sobic006G241800 Sobic001G381100--Sobic003G366000 Sobic005G098400 Sobic005G098400 Sobic001G345200--Sobic005G098400 Sobic001G345200--Sobic003G338200 Sobic002G016400 Sobic002G016400 Sobic001G345200--Sobic002G016400 Sobic001G345200--Sobic001G267100 Sobic003G116100 Sobic003G116100 Sobic001G345200--Sobic003G116100 Sobic001G345200--Sobic005G091000 Sobic001G305300 Sobic001G305300 Sobic001G345200--Sobic001G305300 Sobic008G187400 Sobic008G187400 Sobic001G345200--Sobic008G187400 Sobic003G277200 Sobic003G277200 Sobic001G345200--Sobic003G277200 Sobic004G168600--Sobic001G381100 Sobic004G168600--Sobic003G309400 Sobic004G168600--Sobic001G267100 Sobic004G168600--Sobic005G091000 Sobic004G168600--Sobic001G145200 Sobic003G300400 Sobic003G300400 Sobic004G168600--Sobic003G300400 Sobic004G168600--Sobic008G190000 Sobic004G168600--Sobic002G224200 Sobic004G168600--Sobic001G345200 Sobic006G074900--Sobic001G381100 Sobic006G074900--Sobic005G091000 Sobic006G074900--Sobic001G267100 Sobic006G074900--Sobic001G160000 Sobic006G074900--Sobic001G145200 Sobic006G074900--Sobic008G190000 Sobic006G074900--Sobic004G168600 Sobic010G180800 Sobic010G180800 Sobic006G074900--Sobic010G180800 Sobic006G074900--Sobic002G224200
Octagon: transcription factors


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