Gene annotation
| Transcriptome id | Sobic.001G145200.1 |
|---|---|
| Synonym | CVL1, Sb01g012670 |
| Functional annotation | endonuclease/exonuclease/phosphatase family domain containing protein, expressed |
| UniProt | A0A1B6QIZ2 |
| Pfam | PF03372 |
| Panther DB | PTHR11200 PTHR11200:SF151 |
| NCBI CDD | KOG0565; Inositol polyphosphate 5-phosphatase and related proteins |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
JBrowse
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
 |
| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G267100 | "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed | K13946: AUX1, auxin influx carrier (AUX1 LAX family) |
| 2 | Sobic.001G381100 | receptor-like protein kinase precursor, putative, expressed | - |
| 3 | Sobic.006G074900 | heat shock protein-related, putative, expressed | - |
| 4 | Sobic.004G168600 | heat shock protein-related, putative, expressed | - |
| 5 | Sobic.008G190000 | leucine-rich repeat family protein, putative, expressed | - |
| 6 | Sobic.006G255300 | "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@auxin response factor, putative, expressed | K14486: K14486, auxin response factor |
| 7 | Sobic.001G345200 | OsFBX94 - F-box domain containing protein, expressed | - |
| 8 | Sobic.001G160000 | LSTK-1-like kinase, putative, expressed | K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5 |
| 9 | Sobic.005G092700 | expressed protein | - |
| 10 | Sobic.002G286700 | lysM domain-containing GPI-anchored protein precursor, putative, expressed | - |
| 11 | Sobic.006G014500 | expressed protein | - |
| 12 | Sobic.001G074100 | kinesin motor domain containing protein, putative, expressed | K10401: kinesin family member 18/19 |
| 13 | Sobic.006G105600 | "domain confirmed by Pfam database, expression is supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed | K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1 |
| 14 | Sobic.001G276800 | peptide transporter PTR2, putative, expressed | K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4 |
| 15 | Sobic.005G091000 | receptor protein kinase CLAVATA1 precursor, putative, expressed | - |
| 16 | Sobic.006G187000 | leucine-rich repeat family protein, putative, expressed | - |
| 17 | Sobic.002G224200 | HSF-type DNA-binding domain containing protein, expressed | K09419: heat shock transcription factor, other eukaryote |
| 18 | Sobic.004G115700 | extra-large G-protein-related, putative, expressed | - |
| 19 | Sobic.007G111700 | glutathione S-transferase, C-terminal domain containing protein, expressed | - |
| 20 | Sobic.010G180800 | PINHEAD, putative, expressed | K11593: ELF2C, eukaryotic translation initiation factor 2C |
Gene co-expression network
Octagon: transcription factors
© 2015- RIKEN, All rights reserved.
