Gene annotation
Transcriptome id Sobic.010G180800.1,Sobic.010G180800.2
Synonym PNH, ZLL, AGO10, Sb10g023230
Functional annotation PINHEAD, putative, expressed
UniProt A0A194YL11
Pfam PF16487 PF16488 PF08699 PF16486 PF02170 PF02171
Panther DB PTHR22891 PTHR22891:SF25
NCBI CDD -
KEGG Orthology K11593; ELF2C, eukaryotic translation initiation factor 2C
Gene Ontology GO:0005515; protein binding GO:0003676nucleic acid binding


Orthologs (automatic annotation)
TAIR AT5G43810 : Stabilizer of iron transporter SufD / Polynucleotidyl transferase
RAP-DB (Rice) LOC_Os06g39640.1 : PINHEAD, putative, expressed
MaizeGDB (Corn) Zm00025a042256 , Zm00025a051228
Brachypodium KQK17816 , KQK17815
Barley -
Wheat TraesCS6B02G206700 , TraesCS7D02G351700 , TraesCS7D02G351700 , TraesCS7B02G256500 , TraesCS7A02G371200 , TraesCS7A02G371200 , TraesCS7A02G371200 , TraesCS6D02G166300 , TraesCS6A02G178100 , TraesCS6A02G178100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G381100 receptor-like protein kinase precursor, putative, expressed -
2 Sobic.006G074900 heat shock protein-related, putative, expressed -
3 Sobic.007G142900 receptor-like kinase, putative, expressed -
4 Sobic.004G168600 heat shock protein-related, putative, expressed -
5 Sobic.008G190000 leucine-rich repeat family protein, putative, expressed -
6 Sobic.007G189400 BEE 1, putative, expressed -
7 Sobic.004G302700 YABBY domain containing protein, putative, expressed -
8 Sobic.002G419200 inactive receptor kinase At2g26730 precursor, putative, expressed -
9 Sobic.005G092700 expressed protein -
10 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
11 Sobic.009G254500 protein kinase, putative, expressed -
12 Sobic.002G293700 ATXR, putative, expressed -
13 Sobic.001G145200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
14 Sobic.001G042600 expressed protein -
15 Sobic.001G160000 LSTK-1-like kinase, putative, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
16 Sobic.001G119200 plastocyanin-like domain containing protein, putative, expressed -
17 Sobic.005G091000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
18 Sobic.008G042200 DUF623 domain containing protein, expressed -
19 Sobic.003G089300 heavy-metal-associated domain-containing protein, putative, expressed -
20 Sobic.001G267100 "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)


Gene co-expression network
sample Sobic010G180800 Sobic010G180800 Sobic001G381100 Sobic001G381100 Sobic010G180800--Sobic001G381100 Sobic006G074900 Sobic006G074900 Sobic010G180800--Sobic006G074900 Sobic007G142900 Sobic007G142900 Sobic010G180800--Sobic007G142900 Sobic004G168600 Sobic004G168600 Sobic010G180800--Sobic004G168600 Sobic008G190000 Sobic008G190000 Sobic010G180800--Sobic008G190000 Sobic007G189400 Sobic007G189400 Sobic010G180800--Sobic007G189400 Sobic004G302700 Sobic004G302700 Sobic010G180800--Sobic004G302700 Sobic002G419200 Sobic002G419200 Sobic010G180800--Sobic002G419200 Sobic005G092700 Sobic005G092700 Sobic010G180800--Sobic005G092700 Sobic001G381100--Sobic008G190000 Sobic001G160000 Sobic001G160000 Sobic001G381100--Sobic001G160000 Sobic001G074100 Sobic001G074100 Sobic001G381100--Sobic001G074100 Sobic001G381100--Sobic006G074900 Sobic001G381100--Sobic005G092700 Sobic001G381100--Sobic004G168600 Sobic010G024500 Sobic010G024500 Sobic001G381100--Sobic010G024500 Sobic006G241800 Sobic006G241800 Sobic001G381100--Sobic006G241800 Sobic003G366000 Sobic003G366000 Sobic001G381100--Sobic003G366000 Sobic006G074900--Sobic001G381100 Sobic005G091000 Sobic005G091000 Sobic006G074900--Sobic005G091000 Sobic001G267100 Sobic001G267100 Sobic006G074900--Sobic001G267100 Sobic006G074900--Sobic001G160000 Sobic001G145200 Sobic001G145200 Sobic006G074900--Sobic001G145200 Sobic006G074900--Sobic008G190000 Sobic006G074900--Sobic004G168600 Sobic006G074900--Sobic010G180800 Sobic002G224200 Sobic002G224200 Sobic006G074900--Sobic002G224200 Sobic002G072700 Sobic002G072700 Sobic007G142900--Sobic002G072700 Sobic005G204100 Sobic005G204100 Sobic007G142900--Sobic005G204100 Sobic009G259500 Sobic009G259500 Sobic007G142900--Sobic009G259500 Sobic007G142900--Sobic007G189400 Sobic002G216600 Sobic002G216600 Sobic007G142900--Sobic002G216600 Sobic007G142900--Sobic004G168600 Sobic008G136100 Sobic008G136100 Sobic007G142900--Sobic008G136100 Sobic007G142900--Sobic010G180800 Sobic006G201600 Sobic006G201600 Sobic007G142900--Sobic006G201600 Sobic004G168600--Sobic001G381100 Sobic003G309400 Sobic003G309400 Sobic004G168600--Sobic003G309400 Sobic004G168600--Sobic001G267100 Sobic004G168600--Sobic005G091000 Sobic004G168600--Sobic001G145200 Sobic003G300400 Sobic003G300400 Sobic004G168600--Sobic003G300400 Sobic004G168600--Sobic008G190000 Sobic004G168600--Sobic002G224200 Sobic001G345200 Sobic001G345200 Sobic004G168600--Sobic001G345200 Sobic008G190000--Sobic001G381100 Sobic008G190000--Sobic005G092700 Sobic008G190000--Sobic001G160000 Sobic008G190000--Sobic010G024500 Sobic008G190000--Sobic003G366000 Sobic008G042200 Sobic008G042200 Sobic008G190000--Sobic008G042200 Sobic002G286700 Sobic002G286700 Sobic008G190000--Sobic002G286700 Sobic009G200000 Sobic009G200000 Sobic008G190000--Sobic009G200000 Sobic004G115700 Sobic004G115700 Sobic008G190000--Sobic004G115700 Sobic007G189400--Sobic002G072700 Sobic005G188500 Sobic005G188500 Sobic007G189400--Sobic005G188500 Sobic009G254500 Sobic009G254500 Sobic007G189400--Sobic009G254500 Sobic003G339600 Sobic003G339600 Sobic007G189400--Sobic003G339600 Sobic001G488400 Sobic001G488400 Sobic007G189400--Sobic001G488400 Sobic010G020600 Sobic010G020600 Sobic007G189400--Sobic010G020600 Sobic006G044200 Sobic006G044200 Sobic007G189400--Sobic006G044200 Sobic001G119200 Sobic001G119200 Sobic007G189400--Sobic001G119200 Sobic002G139800 Sobic002G139800 Sobic007G189400--Sobic002G139800 Sobic001G046400 Sobic001G046400 Sobic004G302700--Sobic001G046400 Sobic004G302700--Sobic003G366000 Sobic001G135600 Sobic001G135600 Sobic004G302700--Sobic001G135600 Sobic006G187000 Sobic006G187000 Sobic004G302700--Sobic006G187000 Sobic009G141300 Sobic009G141300 Sobic004G302700--Sobic009G141300 Sobic008G150500 Sobic008G150500 Sobic004G302700--Sobic008G150500 Sobic003G283900 Sobic003G283900 Sobic004G302700--Sobic003G283900 Sobic002G011000 Sobic002G011000 Sobic004G302700--Sobic002G011000 Sobic007G115400 Sobic007G115400 Sobic004G302700--Sobic007G115400 Sobic002G419200--Sobic003G300400 Sobic003G338200 Sobic003G338200 Sobic002G419200--Sobic003G338200 Sobic003G116100 Sobic003G116100 Sobic002G419200--Sobic003G116100 Sobic002G419200--Sobic003G309400 Sobic003G277200 Sobic003G277200 Sobic002G419200--Sobic003G277200 Sobic001G285200 Sobic001G285200 Sobic002G419200--Sobic001G285200 Sobic002G032500 Sobic002G032500 Sobic002G419200--Sobic002G032500 Sobic004G248100 Sobic004G248100 Sobic002G419200--Sobic004G248100 Sobic002G419200--Sobic003G339600 Sobic005G092700--Sobic008G190000 Sobic005G092700--Sobic008G042200 Sobic005G092700--Sobic009G200000 Sobic005G092700--Sobic004G115700 Sobic005G092700--Sobic003G366000 Sobic005G092700--Sobic001G381100 Sobic005G092700--Sobic001G160000 Sobic001G390400 Sobic001G390400 Sobic005G092700--Sobic001G390400 Sobic001G075700 Sobic001G075700 Sobic005G092700--Sobic001G075700
Octagon: transcription factors


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