Gene annotation
Transcriptome id Sobic.006G074900.1
Synonym Sb06g016210
Functional annotation heat shock protein-related, putative, expressed
UniProt C5YGA4
Pfam PF02861
Panther DB PTHR11638 PTHR11638:SF69
NCBI CDD KOG1051; Chaperone HSP104 and related ATP-dependent Clp proteases
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G52490 : Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os04g33980.1 : transposon protein, putative, Mutator sub-class, expressed
MaizeGDB (Corn) Zm00025a011475 , Zm00025a020294 , Zm00025a029038 , Zm00025a056015 , Zm00025a011930 , Zm00025a033537 , Zm00025a020580
Brachypodium KQJ99403 , KQJ82557 , KQJ99771
Barley HORVU4Hr1G021370.9 , HORVU4Hr1G021370.1 , HORVU2Hr1G073780.1 , HORVU2Hr1G073780.3 , HORVU2Hr1G073780.2 , HORVU2Hr1G073780.5 , HORVU2Hr1G073780.4 , HORVU2Hr1G073780.6
Wheat TraesCS2B02G313800 , TraesCS4D02G114100 , TraesCS2D02G295600 , TraesCS4B02G357400 , TraesCS3D02G418100 , TraesCS4A02G199000 , TraesCS2A02G297600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G381100 receptor-like protein kinase precursor, putative, expressed -
2 Sobic.005G091000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
3 Sobic.001G267100 "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
4 Sobic.001G160000 LSTK-1-like kinase, putative, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
5 Sobic.001G145200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
6 Sobic.008G190000 leucine-rich repeat family protein, putative, expressed -
7 Sobic.004G168600 heat shock protein-related, putative, expressed -
8 Sobic.010G180800 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
9 Sobic.002G224200 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
10 Sobic.002G419200 inactive receptor kinase At2g26730 precursor, putative, expressed -
11 Sobic.001G345200 OsFBX94 - F-box domain containing protein, expressed -
12 Sobic.003G338200 receptor-like protein kinase precursor, putative, expressed -
13 Sobic.006G105600 "domain confirmed by Pfam database, expression is supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
14 Sobic.002G032500 leucine-rich repeat family protein, putative, expressed -
15 Sobic.003G309400 OsSub4 - Putative Subtilisin homologue, expressed -
16 Sobic.006G187000 leucine-rich repeat family protein, putative, expressed -
17 Sobic.003G089300 heavy-metal-associated domain-containing protein, putative, expressed -
18 Sobic.003G300400 expressed protein -
19 Sobic.004G248100 endoglucanase, putative, expressed -
20 Sobic.009G060800 carboxyl-terminal proteinase, putative, expressed -


Gene co-expression network
sample Sobic006G074900 Sobic006G074900 Sobic001G381100 Sobic001G381100 Sobic006G074900--Sobic001G381100 Sobic005G091000 Sobic005G091000 Sobic006G074900--Sobic005G091000 Sobic001G267100 Sobic001G267100 Sobic006G074900--Sobic001G267100 Sobic001G160000 Sobic001G160000 Sobic006G074900--Sobic001G160000 Sobic001G145200 Sobic001G145200 Sobic006G074900--Sobic001G145200 Sobic008G190000 Sobic008G190000 Sobic006G074900--Sobic008G190000 Sobic004G168600 Sobic004G168600 Sobic006G074900--Sobic004G168600 Sobic010G180800 Sobic010G180800 Sobic006G074900--Sobic010G180800 Sobic002G224200 Sobic002G224200 Sobic006G074900--Sobic002G224200 Sobic001G381100--Sobic008G190000 Sobic001G381100--Sobic001G160000 Sobic001G074100 Sobic001G074100 Sobic001G381100--Sobic001G074100 Sobic001G381100--Sobic006G074900 Sobic005G092700 Sobic005G092700 Sobic001G381100--Sobic005G092700 Sobic001G381100--Sobic004G168600 Sobic010G024500 Sobic010G024500 Sobic001G381100--Sobic010G024500 Sobic006G241800 Sobic006G241800 Sobic001G381100--Sobic006G241800 Sobic003G366000 Sobic003G366000 Sobic001G381100--Sobic003G366000 Sobic002G032500 Sobic002G032500 Sobic005G091000--Sobic002G032500 Sobic006G105600 Sobic006G105600 Sobic005G091000--Sobic006G105600 Sobic005G091000--Sobic001G267100 Sobic003G309400 Sobic003G309400 Sobic005G091000--Sobic003G309400 Sobic003G089300 Sobic003G089300 Sobic005G091000--Sobic003G089300 Sobic003G338200 Sobic003G338200 Sobic005G091000--Sobic003G338200 Sobic005G091000--Sobic001G381100 Sobic005G091000--Sobic002G224200 Sobic005G091000--Sobic006G074900 Sobic006G187000 Sobic006G187000 Sobic001G267100--Sobic006G187000 Sobic001G267100--Sobic005G091000 Sobic001G267100--Sobic001G145200 Sobic001G267100--Sobic006G105600 Sobic009G137500 Sobic009G137500 Sobic001G267100--Sobic009G137500 Sobic001G267100--Sobic001G381100 Sobic001G345200 Sobic001G345200 Sobic001G267100--Sobic001G345200 Sobic001G267100--Sobic004G168600 Sobic001G267100--Sobic006G074900 Sobic001G160000--Sobic006G187000 Sobic001G160000--Sobic008G190000 Sobic001G160000--Sobic003G366000 Sobic001G160000--Sobic001G381100 Sobic001G160000--Sobic005G092700 Sobic010G192500 Sobic010G192500 Sobic001G160000--Sobic010G192500 Sobic001G075700 Sobic001G075700 Sobic001G160000--Sobic001G075700 Sobic001G160000--Sobic001G267100 Sobic001G160000--Sobic005G091000 Sobic001G145200--Sobic001G267100 Sobic001G145200--Sobic001G381100 Sobic001G145200--Sobic006G074900 Sobic001G145200--Sobic004G168600 Sobic001G145200--Sobic008G190000 Sobic006G255300 Sobic006G255300 Sobic001G145200--Sobic006G255300 Sobic001G145200--Sobic001G345200 Sobic001G145200--Sobic001G160000 Sobic001G145200--Sobic005G092700 Sobic008G190000--Sobic001G381100 Sobic008G190000--Sobic005G092700 Sobic008G190000--Sobic001G160000 Sobic008G190000--Sobic010G024500 Sobic008G190000--Sobic003G366000 Sobic008G042200 Sobic008G042200 Sobic008G190000--Sobic008G042200 Sobic002G286700 Sobic002G286700 Sobic008G190000--Sobic002G286700 Sobic009G200000 Sobic009G200000 Sobic008G190000--Sobic009G200000 Sobic004G115700 Sobic004G115700 Sobic008G190000--Sobic004G115700 Sobic004G168600--Sobic001G381100 Sobic004G168600--Sobic003G309400 Sobic004G168600--Sobic001G267100 Sobic004G168600--Sobic005G091000 Sobic004G168600--Sobic001G145200 Sobic003G300400 Sobic003G300400 Sobic004G168600--Sobic003G300400 Sobic004G168600--Sobic008G190000 Sobic004G168600--Sobic002G224200 Sobic004G168600--Sobic001G345200 Sobic010G180800--Sobic001G381100 Sobic010G180800--Sobic006G074900 Sobic007G142900 Sobic007G142900 Sobic010G180800--Sobic007G142900 Sobic010G180800--Sobic004G168600 Sobic010G180800--Sobic008G190000 Sobic007G189400 Sobic007G189400 Sobic010G180800--Sobic007G189400 Sobic004G302700 Sobic004G302700 Sobic010G180800--Sobic004G302700 Sobic002G419200 Sobic002G419200 Sobic010G180800--Sobic002G419200 Sobic010G180800--Sobic005G092700 Sobic002G224200--Sobic005G091000 Sobic002G224200--Sobic001G381100 Sobic002G224200--Sobic006G105600 Sobic002G224200--Sobic004G168600 Sobic002G224200--Sobic001G267100 Sobic002G224200--Sobic006G074900 Sobic002G394500 Sobic002G394500 Sobic002G224200--Sobic002G394500 Sobic002G224200--Sobic008G190000 Sobic002G224200--Sobic001G160000
Octagon: transcription factors


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