Gene annotation
Transcriptome id Sobic.001G042600.1
Synonym
Functional annotation expressed protein
UniProt A0A1Z5S4A5
Pfam PF04195
Panther DB PTHR31099
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G15420 : myosin heavy chain-related
RAP-DB (Rice) LOC_Os06g06950.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G260200 helix-loop-helix DNA-binding protein, putative, expressed -
2 Sobic.007G189400 BEE 1, putative, expressed -
3 Sobic.001G119200 plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.001G075700 AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
5 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
6 Sobic.003G018700 CIN-like (ClassII) Subclade 17 TCP(PubMedID : 21444336)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
7 Sobic.007G142900 receptor-like kinase, putative, expressed -
8 Sobic.005G188500 expressed protein -
9 Sobic.009G254500 protein kinase, putative, expressed -
10 Sobic.006G044200 glycosyl hydrolase, putative, expressed K01183: chitinase
11 Sobic.004G168600 heat shock protein-related, putative, expressed -
12 Sobic.003G100400 TOO MANY MOUTHS precursor, putative, expressed -
13 Sobic.010G180800 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
14 Sobic.004G248100 endoglucanase, putative, expressed -
15 Sobic.001G381100 receptor-like protein kinase precursor, putative, expressed -
16 Sobic.006G201600 transcription factor FL, putative, expressed -
17 Sobic.006G032800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
18 Sobic.009G141300 GDSL-like lipase/acylhydrolase, putative, expressed -
19 Sobic.002G011000 expressed protein -
20 Sobic.002G072700 carboxyl-terminal peptidase, putative, expressed -


Gene co-expression network
sample Sobic001G042600 Sobic001G042600 Sobic009G260200 Sobic009G260200 Sobic001G042600--Sobic009G260200 Sobic007G189400 Sobic007G189400 Sobic001G042600--Sobic007G189400 Sobic001G119200 Sobic001G119200 Sobic001G042600--Sobic001G119200 Sobic001G075700 Sobic001G075700 Sobic001G042600--Sobic001G075700 Sobic010G020600 Sobic010G020600 Sobic001G042600--Sobic010G020600 Sobic003G018700 Sobic003G018700 Sobic001G042600--Sobic003G018700 Sobic007G142900 Sobic007G142900 Sobic001G042600--Sobic007G142900 Sobic005G188500 Sobic005G188500 Sobic001G042600--Sobic005G188500 Sobic009G254500 Sobic009G254500 Sobic001G042600--Sobic009G254500 Sobic009G260200--Sobic001G042600 Sobic006G201600 Sobic006G201600 Sobic009G260200--Sobic006G201600 Sobic009G260200--Sobic007G189400 Sobic009G260200--Sobic005G188500 Sobic005G123900 Sobic005G123900 Sobic009G260200--Sobic005G123900 Sobic009G260200--Sobic001G119200 Sobic006G032800 Sobic006G032800 Sobic009G260200--Sobic006G032800 Sobic009G260200--Sobic007G142900 Sobic006G189400 Sobic006G189400 Sobic009G260200--Sobic006G189400 Sobic002G072700 Sobic002G072700 Sobic007G189400--Sobic002G072700 Sobic007G189400--Sobic005G188500 Sobic007G189400--Sobic009G254500 Sobic003G339600 Sobic003G339600 Sobic007G189400--Sobic003G339600 Sobic001G488400 Sobic001G488400 Sobic007G189400--Sobic001G488400 Sobic007G189400--Sobic010G020600 Sobic006G044200 Sobic006G044200 Sobic007G189400--Sobic006G044200 Sobic007G189400--Sobic001G119200 Sobic002G139800 Sobic002G139800 Sobic007G189400--Sobic002G139800 Sobic002G011000 Sobic002G011000 Sobic001G119200--Sobic002G011000 Sobic001G119200--Sobic009G254500 Sobic010G077700 Sobic010G077700 Sobic001G119200--Sobic010G077700 Sobic006G160800 Sobic006G160800 Sobic001G119200--Sobic006G160800 Sobic004G302700 Sobic004G302700 Sobic001G119200--Sobic004G302700 Sobic009G141300 Sobic009G141300 Sobic001G119200--Sobic009G141300 Sobic001G046400 Sobic001G046400 Sobic001G119200--Sobic001G046400 Sobic004G342000 Sobic004G342000 Sobic001G119200--Sobic004G342000 Sobic001G438500 Sobic001G438500 Sobic001G119200--Sobic001G438500 Sobic001G160000 Sobic001G160000 Sobic001G075700--Sobic001G160000 Sobic005G092700 Sobic005G092700 Sobic001G075700--Sobic005G092700 Sobic008G042200 Sobic008G042200 Sobic001G075700--Sobic008G042200 Sobic008G190000 Sobic008G190000 Sobic001G075700--Sobic008G190000 Sobic005G125300 Sobic005G125300 Sobic001G075700--Sobic005G125300 Sobic001G075700--Sobic004G302700 Sobic009G200000 Sobic009G200000 Sobic001G075700--Sobic009G200000 Sobic006G187000 Sobic006G187000 Sobic001G075700--Sobic006G187000 Sobic003G366000 Sobic003G366000 Sobic001G075700--Sobic003G366000 Sobic004G317200 Sobic004G317200 Sobic010G020600--Sobic004G317200 Sobic004G248100 Sobic004G248100 Sobic010G020600--Sobic004G248100 Sobic010G020600--Sobic003G339600 Sobic003G070600 Sobic003G070600 Sobic010G020600--Sobic003G070600 Sobic009G235700 Sobic009G235700 Sobic010G020600--Sobic009G235700 Sobic007G160300 Sobic007G160300 Sobic010G020600--Sobic007G160300 Sobic010G020600--Sobic003G018700 Sobic008G097700 Sobic008G097700 Sobic010G020600--Sobic008G097700 Sobic001G221900 Sobic001G221900 Sobic010G020600--Sobic001G221900 Sobic003G018700--Sobic010G020600 Sobic006G241800 Sobic006G241800 Sobic003G018700--Sobic006G241800 Sobic003G018700--Sobic004G248100 Sobic002G164700 Sobic002G164700 Sobic003G018700--Sobic002G164700 Sobic001G381100 Sobic001G381100 Sobic003G018700--Sobic001G381100 Sobic003G018700--Sobic004G317200 Sobic003G018700--Sobic006G032800 Sobic003G018700--Sobic006G044200 Sobic001G074100 Sobic001G074100 Sobic003G018700--Sobic001G074100 Sobic007G142900--Sobic002G072700 Sobic005G204100 Sobic005G204100 Sobic007G142900--Sobic005G204100 Sobic009G259500 Sobic009G259500 Sobic007G142900--Sobic009G259500 Sobic007G142900--Sobic007G189400 Sobic002G216600 Sobic002G216600 Sobic007G142900--Sobic002G216600 Sobic004G168600 Sobic004G168600 Sobic007G142900--Sobic004G168600 Sobic008G136100 Sobic008G136100 Sobic007G142900--Sobic008G136100 Sobic010G180800 Sobic010G180800 Sobic007G142900--Sobic010G180800 Sobic007G142900--Sobic006G201600 Sobic005G188500--Sobic001G488400 Sobic005G188500--Sobic006G044200 Sobic005G188500--Sobic007G189400 Sobic005G188500--Sobic006G032800 Sobic007G012800 Sobic007G012800 Sobic005G188500--Sobic007G012800 Sobic008G035400 Sobic008G035400 Sobic005G188500--Sobic008G035400 Sobic010G065700 Sobic010G065700 Sobic005G188500--Sobic010G065700 Sobic005G209900 Sobic005G209900 Sobic005G188500--Sobic005G209900 Sobic010G107200 Sobic010G107200 Sobic005G188500--Sobic010G107200 Sobic009G254500--Sobic002G011000 Sobic008G012600 Sobic008G012600 Sobic009G254500--Sobic008G012600 Sobic009G254500--Sobic009G141300 Sobic009G254500--Sobic001G119200 Sobic009G254500--Sobic001G438500 Sobic009G254500--Sobic006G160800 Sobic009G254500--Sobic010G077700 Sobic004G062100 Sobic004G062100 Sobic009G254500--Sobic004G062100 Sobic003G300400 Sobic003G300400 Sobic009G254500--Sobic003G300400
Octagon: transcription factors


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