Gene annotation
Transcriptome id Sobic.003G018700.3,Sobic.003G018700.1,Sobic.003G018700.2
Synonym Sb03g001940, TCP4, MEE35, TCP-like gene;TCP-like gene;SbTCP7;SbTCP7
Functional annotation CIN-like (ClassII) Subclade 17 TCP (PubMedID : 21444336)
SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)." (PubMedID : 27917941)
"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)" (PubMedID : 28383054)
TCP family transcription factor, putative, expressed
UniProt A0A1W0VVH8 , A0A1B6Q0V9
Pfam PF03634
Panther DB PTHR31072 PTHR31072:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G15030 : TCP family transcription factor 4
RAP-DB (Rice) LOC_Os01g11550.1 : TCP family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a022913 , Zm00025a040029 , Zm00025a027530
Brachypodium KQK03293 , KQK03292
Barley HORVU3Hr1G028240.5 , HORVU3Hr1G028240.4 , HORVU3Hr1G028240.6 , HORVU3Hr1G028240.1 , HORVU3Hr1G028240.3 , HORVU3Hr1G028240.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
2 Sobic.006G241800 receptor kinase, putative, expressed -
3 Sobic.004G248100 endoglucanase, putative, expressed -
4 Sobic.002G164700 ZOS9-04 - C2H2 zinc finger protein, expressed -
5 Sobic.001G381100 receptor-like protein kinase precursor, putative, expressed -
6 Sobic.004G317200 "Upregulated to a greater extent than that of SbER1 in stem in response to drouht stress, not expredded in roots. SbER2 fusion protein localized on the cell membrane and chloroplast. Net photosynthetic rate and WUE, phenylpropanoid biosynthetic genes expression, and lignin content increased in overexpressing maize."(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
7 Sobic.006G032800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
8 Sobic.006G044200 glycosyl hydrolase, putative, expressed K01183: chitinase
9 Sobic.001G074100 kinesin motor domain containing protein, putative, expressed K10401: kinesin family member 18/19
10 Sobic.010G078700 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
11 Sobic.009G235700 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
12 Sobic.007G189400 BEE 1, putative, expressed -
13 Sobic.006G058000 OsSCP24 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
14 Sobic.009G154100 expressed protein -
15 Sobic.004G164700 expressed protein -
16 Sobic.001G221900 3-ketoacyl-CoA synthase precursor, putative, expressed K15397: 3-ketoacyl-CoA synthase
17 Sobic.001G470200 membrane associated DUF588 domain containing protein, putative, expressed -
18 Sobic.008G190000 leucine-rich repeat family protein, putative, expressed -
19 Sobic.002G045200 protein kinase, putative, expressed -
20 Sobic.008G023401 - -


Gene co-expression network
sample Sobic003G018700 Sobic003G018700 Sobic010G020600 Sobic010G020600 Sobic003G018700--Sobic010G020600 Sobic006G241800 Sobic006G241800 Sobic003G018700--Sobic006G241800 Sobic004G248100 Sobic004G248100 Sobic003G018700--Sobic004G248100 Sobic002G164700 Sobic002G164700 Sobic003G018700--Sobic002G164700 Sobic001G381100 Sobic001G381100 Sobic003G018700--Sobic001G381100 Sobic004G317200 Sobic004G317200 Sobic003G018700--Sobic004G317200 Sobic006G032800 Sobic006G032800 Sobic003G018700--Sobic006G032800 Sobic006G044200 Sobic006G044200 Sobic003G018700--Sobic006G044200 Sobic001G074100 Sobic001G074100 Sobic003G018700--Sobic001G074100 Sobic010G020600--Sobic004G317200 Sobic010G020600--Sobic004G248100 Sobic003G339600 Sobic003G339600 Sobic010G020600--Sobic003G339600 Sobic003G070600 Sobic003G070600 Sobic010G020600--Sobic003G070600 Sobic009G235700 Sobic009G235700 Sobic010G020600--Sobic009G235700 Sobic007G160300 Sobic007G160300 Sobic010G020600--Sobic007G160300 Sobic010G020600--Sobic003G018700 Sobic008G097700 Sobic008G097700 Sobic010G020600--Sobic008G097700 Sobic001G221900 Sobic001G221900 Sobic010G020600--Sobic001G221900 Sobic003G291000 Sobic003G291000 Sobic006G241800--Sobic003G291000 Sobic006G241800--Sobic003G018700 Sobic006G241800--Sobic004G317200 Sobic004G164700 Sobic004G164700 Sobic006G241800--Sobic004G164700 Sobic010G024500 Sobic010G024500 Sobic006G241800--Sobic010G024500 Sobic002G311000 Sobic002G311000 Sobic006G241800--Sobic002G311000 Sobic006G241800--Sobic010G020600 Sobic006G241800--Sobic001G381100 Sobic006G241800--Sobic001G074100 Sobic002G032500 Sobic002G032500 Sobic004G248100--Sobic002G032500 Sobic003G113500 Sobic003G113500 Sobic004G248100--Sobic003G113500 Sobic004G248100--Sobic010G020600 Sobic004G357000 Sobic004G357000 Sobic004G248100--Sobic004G357000 Sobic003G309400 Sobic003G309400 Sobic004G248100--Sobic003G309400 Sobic003G338200 Sobic003G338200 Sobic004G248100--Sobic003G338200 Sobic004G248100--Sobic003G339600 Sobic004G248100--Sobic006G044200 Sobic007G094200 Sobic007G094200 Sobic004G248100--Sobic007G094200 Sobic002G164700--Sobic006G241800 Sobic002G164700--Sobic003G018700 Sobic002G164700--Sobic006G032800 Sobic002G164700--Sobic003G291000 Sobic010G107200 Sobic010G107200 Sobic002G164700--Sobic010G107200 Sobic010G165100 Sobic010G165100 Sobic002G164700--Sobic010G165100 Sobic009G154100 Sobic009G154100 Sobic002G164700--Sobic009G154100 Sobic001G389600 Sobic001G389600 Sobic002G164700--Sobic001G389600 Sobic006G233600 Sobic006G233600 Sobic002G164700--Sobic006G233600 Sobic008G190000 Sobic008G190000 Sobic001G381100--Sobic008G190000 Sobic001G160000 Sobic001G160000 Sobic001G381100--Sobic001G160000 Sobic001G381100--Sobic001G074100 Sobic006G074900 Sobic006G074900 Sobic001G381100--Sobic006G074900 Sobic005G092700 Sobic005G092700 Sobic001G381100--Sobic005G092700 Sobic004G168600 Sobic004G168600 Sobic001G381100--Sobic004G168600 Sobic001G381100--Sobic010G024500 Sobic001G381100--Sobic006G241800 Sobic003G366000 Sobic003G366000 Sobic001G381100--Sobic003G366000 Sobic004G317200--Sobic010G020600 Sobic004G317200--Sobic004G357000 Sobic001G470200 Sobic001G470200 Sobic004G317200--Sobic001G470200 Sobic003G089300 Sobic003G089300 Sobic004G317200--Sobic003G089300 Sobic001G390400 Sobic001G390400 Sobic004G317200--Sobic001G390400 Sobic004G317200--Sobic006G241800 Sobic007G211200 Sobic007G211200 Sobic004G317200--Sobic007G211200 Sobic004G317200--Sobic007G160300 Sobic006G058000 Sobic006G058000 Sobic004G317200--Sobic006G058000 Sobic006G032800--Sobic006G044200 Sobic006G032800--Sobic010G107200 Sobic005G188500 Sobic005G188500 Sobic006G032800--Sobic005G188500 Sobic006G032800--Sobic006G233600 Sobic006G032800--Sobic003G018700 Sobic006G032800--Sobic009G154100 Sobic006G032800--Sobic001G389600 Sobic001G478100 Sobic001G478100 Sobic006G032800--Sobic001G478100 Sobic007G012800 Sobic007G012800 Sobic006G032800--Sobic007G012800 Sobic008G035400 Sobic008G035400 Sobic006G044200--Sobic008G035400 Sobic001G488400 Sobic001G488400 Sobic006G044200--Sobic001G488400 Sobic006G044200--Sobic005G188500 Sobic006G044200--Sobic004G248100 Sobic006G044200--Sobic006G032800 Sobic003G116100 Sobic003G116100 Sobic006G044200--Sobic003G116100 Sobic007G189400 Sobic007G189400 Sobic006G044200--Sobic007G189400 Sobic002G382500 Sobic002G382500 Sobic006G044200--Sobic002G382500 Sobic002G068400 Sobic002G068400 Sobic006G044200--Sobic002G068400 Sobic001G074100--Sobic001G381100 Sobic003G031700 Sobic003G031700 Sobic001G074100--Sobic003G031700 Sobic002G362700 Sobic002G362700 Sobic001G074100--Sobic002G362700 Sobic001G074100--Sobic006G241800 Sobic010G211800 Sobic010G211800 Sobic001G074100--Sobic010G211800 Sobic002G045200 Sobic002G045200 Sobic001G074100--Sobic002G045200 Sobic001G074100--Sobic003G291000 Sobic009G124800 Sobic009G124800 Sobic001G074100--Sobic009G124800 Sobic010G211700 Sobic010G211700 Sobic001G074100--Sobic010G211700
Octagon: transcription factors


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