Gene annotation
Transcriptome id Sobic.005G098400.1
Synonym IAA12, BDL, SbIAA15, auxin/indole-3-acetic acid (Aux/IAA), Sb05g008512
Functional annotation "domain confirmed by Pfam database, expressed in leaf and root" (PubMedID : 20499123)
OsIAA27 - Auxin-responsive Aux/IAA gene family member, expressed
UniProt A0A1B6PRC8
Pfam PF02309
Panther DB PTHR31734 PTHR31734:SF35
NCBI CDD -
KEGG Orthology K14484; auxin-responsive protein IAA
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT1G04550 : AUX/IAA transcriptional regulator family protein
RAP-DB (Rice) LOC_Os11g11410.1 : OsIAA27 - Auxin-responsive Aux/IAA gene family member, expressed
MaizeGDB (Corn) Zm00025a029685 , Zm00025a012725
Brachypodium KQJ88916 , KQJ88917 , KQJ88918 , KQJ88919
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G016400 monocopper oxidase, putative, expressed -
2 Sobic.001G305300 ATROPGEF7/ROPGEF7, putative, expressed -
3 Sobic.001G345200 OsFBX94 - F-box domain containing protein, expressed -
4 Sobic.003G418300 protein kinase, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
5 Sobic.007G050500 MYB family transcription factor, putative, expressed -
6 Sobic.007G225400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
7 Sobic.005G091000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
8 Sobic.005G121700 expressed protein -
9 Sobic.008G170400 expressed protein -
10 Sobic.007G120301 - -
11 Sobic.003G338200 receptor-like protein kinase precursor, putative, expressed -
12 Sobic.007G111700 glutathione S-transferase, C-terminal domain containing protein, expressed -
13 Sobic.005G231400 cyclin, putative, expressed K18813: cyclin D7, plant
14 Sobic.001G310200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.006G149300 possible lysine decarboxylase domain containing protein, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
16 Sobic.005G010300 expressed protein -
17 Sobic.008G187400 - -
18 Sobic.010G216600 expressed protein -
19 Sobic.003G116100 pectinesterase, putative, expressed K01051: pectinesterase
20 Sobic.002G032500 leucine-rich repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic005G098400 Sobic005G098400 Sobic002G016400 Sobic002G016400 Sobic005G098400--Sobic002G016400 Sobic001G305300 Sobic001G305300 Sobic005G098400--Sobic001G305300 Sobic001G345200 Sobic001G345200 Sobic005G098400--Sobic001G345200 Sobic003G418300 Sobic003G418300 Sobic005G098400--Sobic003G418300 Sobic007G050500 Sobic007G050500 Sobic005G098400--Sobic007G050500 Sobic007G225400 Sobic007G225400 Sobic005G098400--Sobic007G225400 Sobic005G091000 Sobic005G091000 Sobic005G098400--Sobic005G091000 Sobic005G121700 Sobic005G121700 Sobic005G098400--Sobic005G121700 Sobic008G170400 Sobic008G170400 Sobic005G098400--Sobic008G170400 Sobic002G016400--Sobic005G098400 Sobic002G016400--Sobic003G418300 Sobic002G016400--Sobic007G050500 Sobic002G016400--Sobic001G305300 Sobic002G016400--Sobic001G345200 Sobic007G208100 Sobic007G208100 Sobic002G016400--Sobic007G208100 Sobic006G149300 Sobic006G149300 Sobic002G016400--Sobic006G149300 Sobic001G382700 Sobic001G382700 Sobic002G016400--Sobic001G382700 Sobic002G016400--Sobic008G170400 Sobic001G305300--Sobic005G098400 Sobic001G305300--Sobic002G016400 Sobic007G120301 Sobic007G120301 Sobic001G305300--Sobic007G120301 Sobic001G305300--Sobic001G345200 Sobic001G305300--Sobic005G121700 Sobic001G305300--Sobic007G050500 Sobic005G010300 Sobic005G010300 Sobic001G305300--Sobic005G010300 Sobic001G305300--Sobic007G225400 Sobic001G310200 Sobic001G310200 Sobic001G305300--Sobic001G310200 Sobic001G345200--Sobic005G098400 Sobic003G338200 Sobic003G338200 Sobic001G345200--Sobic003G338200 Sobic001G345200--Sobic002G016400 Sobic001G267100 Sobic001G267100 Sobic001G345200--Sobic001G267100 Sobic003G116100 Sobic003G116100 Sobic001G345200--Sobic003G116100 Sobic001G345200--Sobic005G091000 Sobic001G345200--Sobic001G305300 Sobic008G187400 Sobic008G187400 Sobic001G345200--Sobic008G187400 Sobic003G277200 Sobic003G277200 Sobic001G345200--Sobic003G277200 Sobic003G418300--Sobic002G016400 Sobic003G418300--Sobic005G098400 Sobic003G418300--Sobic001G345200 Sobic003G418300--Sobic003G338200 Sobic003G418300--Sobic008G170400 Sobic007G094200 Sobic007G094200 Sobic003G418300--Sobic007G094200 Sobic005G231400 Sobic005G231400 Sobic003G418300--Sobic005G231400 Sobic010G216600 Sobic010G216600 Sobic003G418300--Sobic010G216600 Sobic003G418300--Sobic008G187400 Sobic007G050500--Sobic002G016400 Sobic007G050500--Sobic005G098400 Sobic007G050500--Sobic001G267100 Sobic002G278200 Sobic002G278200 Sobic007G050500--Sobic002G278200 Sobic007G050500--Sobic001G305300 Sobic007G050500--Sobic007G120301 Sobic005G025900 Sobic005G025900 Sobic007G050500--Sobic005G025900 Sobic007G050500--Sobic001G345200 Sobic007G111700 Sobic007G111700 Sobic007G050500--Sobic007G111700 Sobic004G170900 Sobic004G170900 Sobic007G225400--Sobic004G170900 Sobic007G225400--Sobic005G098400 Sobic007G225400--Sobic010G216600 Sobic005G047100 Sobic005G047100 Sobic007G225400--Sobic005G047100 Sobic002G226500 Sobic002G226500 Sobic007G225400--Sobic002G226500 Sobic007G225400--Sobic005G121700 Sobic007G225400--Sobic002G016400 Sobic007G225400--Sobic001G305300 Sobic001G264400 Sobic001G264400 Sobic007G225400--Sobic001G264400 Sobic002G032500 Sobic002G032500 Sobic005G091000--Sobic002G032500 Sobic006G105600 Sobic006G105600 Sobic005G091000--Sobic006G105600 Sobic005G091000--Sobic001G267100 Sobic003G309400 Sobic003G309400 Sobic005G091000--Sobic003G309400 Sobic003G089300 Sobic003G089300 Sobic005G091000--Sobic003G089300 Sobic005G091000--Sobic003G338200 Sobic001G381100 Sobic001G381100 Sobic005G091000--Sobic001G381100 Sobic002G224200 Sobic002G224200 Sobic005G091000--Sobic002G224200 Sobic006G074900 Sobic006G074900 Sobic005G091000--Sobic006G074900 Sobic001G514400 Sobic001G514400 Sobic005G121700--Sobic001G514400 Sobic005G121700--Sobic005G098400 Sobic008G077300 Sobic008G077300 Sobic005G121700--Sobic008G077300 Sobic009G021700 Sobic009G021700 Sobic005G121700--Sobic009G021700 Sobic005G121700--Sobic001G305300 Sobic005G121700--Sobic007G225400 Sobic002G034301 Sobic002G034301 Sobic005G121700--Sobic002G034301 Sobic005G121700--Sobic007G208100 Sobic005G121700--Sobic002G016400 Sobic008G170400--Sobic007G111700 Sobic008G170400--Sobic002G016400 Sobic008G170400--Sobic005G098400 Sobic008G170400--Sobic005G231400 Sobic008G170400--Sobic003G418300 Sobic010G007000 Sobic010G007000 Sobic008G170400--Sobic010G007000 Sobic005G110600 Sobic005G110600 Sobic008G170400--Sobic005G110600 Sobic002G064600 Sobic002G064600 Sobic008G170400--Sobic002G064600 Sobic006G062300 Sobic006G062300 Sobic008G170400--Sobic006G062300
Octagon: transcription factors


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