Gene annotation
Transcriptome id Sobic.002G016400.2
Synonym sks17
Functional annotation monocopper oxidase, putative, expressed
UniProt A0A1W0W1V5
Pfam PF07731 PF00394 PF07732
Panther DB PTHR11709 PTHR11709:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity GO:0005507copper ion binding


Orthologs (automatic annotation)
TAIR AT5G66920 : SKU5 similar 17
RAP-DB (Rice) LOC_Os07g02810.1 : L-ascorbate oxidase homolog precursor, putative, expressed
MaizeGDB (Corn) Zm00025a044919
Brachypodium KQK10313 , KQK05703 , KQJ84043 , KQK21118
Barley HORVU3Hr1G080360.1 , HORVU2Hr1G062590.3 , HORVU3Hr1G080360.2 , HORVU2Hr1G096250.5 , HORVU3Hr1G080360.4 , HORVU2Hr1G062590.1 , HORVU2Hr1G062590.6 , HORVU2Hr1G062590.7 , HORVU2Hr1G062590.4 , HORVU2Hr1G062590.5 , HORVU2Hr1G062590.8 , HORVU1Hr1G069130.1 , HORVU2Hr1G096250.4 , HORVU2Hr1G096250.2 , HORVU2Hr1G096250.3 , HORVU2Hr1G096250.1 , HORVU1Hr1G069130.2
Wheat TraesCS3B02G371800 , TraesCS3B02G101200 , TraesCS2D02G259100 , TraesCS3D02G333700 , TraesCS2A02G406200 , TraesCS2A02G406200 , TraesCS2A02G406200 , TraesCS2D02G403100 , TraesCS1B02G314600 , TraesCS2B02G423900 , TraesCS2B02G277200 , TraesCS3A02G340200 , TraesCS2A02G264900 , TraesCS1A02G304100 , TraesCS1D02G303600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G098400 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@OsIAA27 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
2 Sobic.003G418300 protein kinase, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
3 Sobic.007G050500 MYB family transcription factor, putative, expressed -
4 Sobic.001G305300 ATROPGEF7/ROPGEF7, putative, expressed -
5 Sobic.001G345200 OsFBX94 - F-box domain containing protein, expressed -
6 Sobic.007G208100 heavy metal-associated domain containing protein, expressed -
7 Sobic.006G149300 possible lysine decarboxylase domain containing protein, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
8 Sobic.001G382700 inactive receptor kinase At2g26730 precursor, putative, expressed -
9 Sobic.008G170400 expressed protein -
10 Sobic.007G120301 - -
11 Sobic.009G061400 leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed -
12 Sobic.010G104400 cysteine-rich repeat secretory protein precursor, putative, expressed -
13 Sobic.008G114000 expressed protein -
14 Sobic.010G216600 expressed protein -
15 Sobic.005G010300 expressed protein -
16 Sobic.007G111700 glutathione S-transferase, C-terminal domain containing protein, expressed -
17 Sobic.007G225400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
18 Sobic.002G278200 thaumatin, putative, expressed -
19 Sobic.005G231300 thaumatin, putative, expressed -
20 Sobic.006G054600 OsGrx_C8 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3


Gene co-expression network
sample Sobic002G016400 Sobic002G016400 Sobic005G098400 Sobic005G098400 Sobic002G016400--Sobic005G098400 Sobic003G418300 Sobic003G418300 Sobic002G016400--Sobic003G418300 Sobic007G050500 Sobic007G050500 Sobic002G016400--Sobic007G050500 Sobic001G305300 Sobic001G305300 Sobic002G016400--Sobic001G305300 Sobic001G345200 Sobic001G345200 Sobic002G016400--Sobic001G345200 Sobic007G208100 Sobic007G208100 Sobic002G016400--Sobic007G208100 Sobic006G149300 Sobic006G149300 Sobic002G016400--Sobic006G149300 Sobic001G382700 Sobic001G382700 Sobic002G016400--Sobic001G382700 Sobic008G170400 Sobic008G170400 Sobic002G016400--Sobic008G170400 Sobic005G098400--Sobic002G016400 Sobic005G098400--Sobic001G305300 Sobic005G098400--Sobic001G345200 Sobic005G098400--Sobic003G418300 Sobic005G098400--Sobic007G050500 Sobic007G225400 Sobic007G225400 Sobic005G098400--Sobic007G225400 Sobic005G091000 Sobic005G091000 Sobic005G098400--Sobic005G091000 Sobic005G121700 Sobic005G121700 Sobic005G098400--Sobic005G121700 Sobic005G098400--Sobic008G170400 Sobic003G418300--Sobic002G016400 Sobic003G418300--Sobic005G098400 Sobic003G418300--Sobic001G345200 Sobic003G338200 Sobic003G338200 Sobic003G418300--Sobic003G338200 Sobic003G418300--Sobic008G170400 Sobic007G094200 Sobic007G094200 Sobic003G418300--Sobic007G094200 Sobic005G231400 Sobic005G231400 Sobic003G418300--Sobic005G231400 Sobic010G216600 Sobic010G216600 Sobic003G418300--Sobic010G216600 Sobic008G187400 Sobic008G187400 Sobic003G418300--Sobic008G187400 Sobic007G050500--Sobic002G016400 Sobic007G050500--Sobic005G098400 Sobic001G267100 Sobic001G267100 Sobic007G050500--Sobic001G267100 Sobic002G278200 Sobic002G278200 Sobic007G050500--Sobic002G278200 Sobic007G050500--Sobic001G305300 Sobic007G120301 Sobic007G120301 Sobic007G050500--Sobic007G120301 Sobic005G025900 Sobic005G025900 Sobic007G050500--Sobic005G025900 Sobic007G050500--Sobic001G345200 Sobic007G111700 Sobic007G111700 Sobic007G050500--Sobic007G111700 Sobic001G305300--Sobic005G098400 Sobic001G305300--Sobic002G016400 Sobic001G305300--Sobic007G120301 Sobic001G305300--Sobic001G345200 Sobic001G305300--Sobic005G121700 Sobic001G305300--Sobic007G050500 Sobic005G010300 Sobic005G010300 Sobic001G305300--Sobic005G010300 Sobic001G305300--Sobic007G225400 Sobic001G310200 Sobic001G310200 Sobic001G305300--Sobic001G310200 Sobic001G345200--Sobic005G098400 Sobic001G345200--Sobic003G338200 Sobic001G345200--Sobic002G016400 Sobic001G345200--Sobic001G267100 Sobic003G116100 Sobic003G116100 Sobic001G345200--Sobic003G116100 Sobic001G345200--Sobic005G091000 Sobic001G345200--Sobic001G305300 Sobic001G345200--Sobic008G187400 Sobic003G277200 Sobic003G277200 Sobic001G345200--Sobic003G277200 Sobic005G231300 Sobic005G231300 Sobic007G208100--Sobic005G231300 Sobic007G208100--Sobic002G016400 Sobic003G296500 Sobic003G296500 Sobic007G208100--Sobic003G296500 Sobic007G208100--Sobic006G149300 Sobic002G034301 Sobic002G034301 Sobic007G208100--Sobic002G034301 Sobic003G420100 Sobic003G420100 Sobic007G208100--Sobic003G420100 Sobic010G104400 Sobic010G104400 Sobic007G208100--Sobic010G104400 Sobic003G247600 Sobic003G247600 Sobic007G208100--Sobic003G247600 Sobic001G514300 Sobic001G514300 Sobic007G208100--Sobic001G514300 Sobic006G149300--Sobic002G016400 Sobic006G149300--Sobic007G208100 Sobic006G149300--Sobic010G104400 Sobic006G149300--Sobic005G231300 Sobic006G149300--Sobic005G098400 Sobic002G226500 Sobic002G226500 Sobic006G149300--Sobic002G226500 Sobic006G149300--Sobic002G278200 Sobic006G149300--Sobic007G120301 Sobic007G018100 Sobic007G018100 Sobic006G149300--Sobic007G018100 Sobic001G382700--Sobic002G016400 Sobic001G382700--Sobic010G216600 Sobic003G314900 Sobic003G314900 Sobic001G382700--Sobic003G314900 Sobic001G382700--Sobic003G418300 Sobic009G242501 Sobic009G242501 Sobic001G382700--Sobic009G242501 Sobic001G382700--Sobic007G208100 Sobic003G294500 Sobic003G294500 Sobic001G382700--Sobic003G294500 Sobic001G382700--Sobic005G098400 Sobic001G382700--Sobic006G149300 Sobic008G170400--Sobic007G111700 Sobic008G170400--Sobic002G016400 Sobic008G170400--Sobic005G098400 Sobic008G170400--Sobic005G231400 Sobic008G170400--Sobic003G418300 Sobic010G007000 Sobic010G007000 Sobic008G170400--Sobic010G007000 Sobic005G110600 Sobic005G110600 Sobic008G170400--Sobic005G110600 Sobic002G064600 Sobic002G064600 Sobic008G170400--Sobic002G064600 Sobic006G062300 Sobic006G062300 Sobic008G170400--Sobic006G062300
Octagon: transcription factors


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