Gene annotation
Transcriptome id Sobic.002G278200.1
Synonym Sb02g031120
Functional annotation thaumatin, putative, expressed
UniProt C5X6U5
Pfam PF00314
Panther DB PTHR31048 PTHR31048:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G36010 : Pathogenesis-related thaumatin superfamily protein
RAP-DB (Rice) LOC_Os09g36560.1 : thaumatin, putative, expressed
MaizeGDB (Corn) Zm00025a045375 , Zm00025a051051 , Zm00025a005688 , Zm00025a043524 , Zm00025a012308 , Zm00025a001537 , Zm00025a052900 , Zm00025a049345 , Zm00025a049347 , Zm00025a052993 , Zm00025a034213 , Zm00025a003787 , Zm00025a001541
Brachypodium KQJ87038 , KQK22773 , KQK22772 , PNT64873 , PNT65024 , KQJ91229
Barley HORVU4Hr1G066130.3 , HORVU4Hr1G066130.4 , HORVU5Hr1G112160.8 , HORVU5Hr1G074940.3 , HORVU5Hr1G074940.2 , HORVU5Hr1G112160.4 , HORVU5Hr1G112160.5 , HORVU5Hr1G112160.6 , HORVU5Hr1G112160.7 , HORVU5Hr1G112160.1 , HORVU5Hr1G112160.2 , HORVU4Hr1G063690.5 , HORVU4Hr1G063690.6 , HORVU5Hr1G112160.3 , HORVU5Hr1G084650.2 , HORVU5Hr1G084650.1 , HORVU4Hr1G063690.8 , HORVU4Hr1G063690.9 , HORVU4Hr1G063690.2 , HORVU4Hr1G063690.3 , HORVU4Hr1G063690.7 , HORVU4Hr1G027300.2 , HORVU5Hr1G083260.2 , HORVU5Hr1G083260.3 , HORVU5Hr1G083260.1 , HORVU5Hr1G083260.4 , HORVU5Hr1G083240.4 , HORVU5Hr1G083240.1 , HORVU5Hr1G083240.2 , HORVU5Hr1G083240.3 , HORVU4Hr1G027300.4 , HORVU4Hr1G027300.5 , HORVU4Hr1G027300.3 , HORVU4Hr1G027300.1
Wheat TraesCS5B02G328400 , TraesCS4A02G070800 , TraesCS4A02G070800 , TraesCS7D02G517200 , TraesCS7D02G272100 , TraesCS5D02G334300 , TraesCS7A02G529500 , TraesCS7B02G170200 , TraesCS5D02G283400 , TraesCS5D02G485500 , TraesCS7A02G271800 , TraesCS4A02G177300 , TraesCS5A02G328400 , TraesCS4D02G227500 , TraesCS4B02G140500 , TraesCS4B02G236700 , TraesCS5A02G472800 , TraesCS4D02G135200 , TraesCS5B02G328500 , TraesCS7B02G446200 , TraesCS4A02G070700 , TraesCS7B02G446200 , TraesCS5B02G485700 , TraesCS5A02G328500 , TraesCS5D02G283400 , TraesCS5D02G334400 , TraesCS7D02G517300 , TraesCS5B02G275400
Populus -


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cDNA sequences
Sobic.002G278200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G105600 "domain confirmed by Pfam database, expression is supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
2 Sobic.007G050500 MYB family transcription factor, putative, expressed -
3 Sobic.002G142200 expressed protein -
4 Sobic.002G016400 monocopper oxidase, putative, expressed -
5 Sobic.004G287700 expressed protein -
6 Sobic.009G208900 expressed protein -
7 Sobic.002G226500 "SG1(Ortholog in rice:Nakagawa et al., 2012)"(PubMedID : 31659856)@expressed protein -
8 Sobic.004G233700 glycosyl hydrolase family 3 protein, putative, expressed -
9 Sobic.005G091000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
10 Sobic.006G149300 possible lysine decarboxylase domain containing protein, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
11 Sobic.001G267100 "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
12 Sobic.009G137500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.006G191900 ZR1 protein, putative, expressed -
14 Sobic.005G098400 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@OsIAA27 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
15 Sobic.001G140600 expressed protein -
16 Sobic.001G382700 inactive receptor kinase At2g26730 precursor, putative, expressed -
17 Sobic.006G124400 ATP binding protein, putative, expressed -
18 Sobic.003G418300 protein kinase, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
19 Sobic.007G225400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
20 Sobic.002G224200 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote


Gene co-expression network
sample Sobic002G278200 Sobic002G278200 Sobic006G105600 Sobic006G105600 Sobic002G278200--Sobic006G105600 Sobic007G050500 Sobic007G050500 Sobic002G278200--Sobic007G050500 Sobic002G142200 Sobic002G142200 Sobic002G278200--Sobic002G142200 Sobic002G016400 Sobic002G016400 Sobic002G278200--Sobic002G016400 Sobic004G287700 Sobic004G287700 Sobic002G278200--Sobic004G287700 Sobic009G208900 Sobic009G208900 Sobic002G278200--Sobic009G208900 Sobic002G226500 Sobic002G226500 Sobic002G278200--Sobic002G226500 Sobic004G233700 Sobic004G233700 Sobic002G278200--Sobic004G233700 Sobic005G091000 Sobic005G091000 Sobic002G278200--Sobic005G091000 Sobic006G105600--Sobic005G091000 Sobic001G267100 Sobic001G267100 Sobic006G105600--Sobic001G267100 Sobic006G124400 Sobic006G124400 Sobic006G105600--Sobic006G124400 Sobic002G296000 Sobic002G296000 Sobic006G105600--Sobic002G296000 Sobic009G137500 Sobic009G137500 Sobic006G105600--Sobic009G137500 Sobic002G394500 Sobic002G394500 Sobic006G105600--Sobic002G394500 Sobic006G105600--Sobic004G233700 Sobic008G083500 Sobic008G083500 Sobic006G105600--Sobic008G083500 Sobic001G304800 Sobic001G304800 Sobic006G105600--Sobic001G304800 Sobic007G050500--Sobic002G016400 Sobic005G098400 Sobic005G098400 Sobic007G050500--Sobic005G098400 Sobic007G050500--Sobic001G267100 Sobic007G050500--Sobic002G278200 Sobic001G305300 Sobic001G305300 Sobic007G050500--Sobic001G305300 Sobic007G120301 Sobic007G120301 Sobic007G050500--Sobic007G120301 Sobic005G025900 Sobic005G025900 Sobic007G050500--Sobic005G025900 Sobic001G345200 Sobic001G345200 Sobic007G050500--Sobic001G345200 Sobic007G111700 Sobic007G111700 Sobic007G050500--Sobic007G111700 Sobic007G168900 Sobic007G168900 Sobic002G142200--Sobic007G168900 Sobic010G017400 Sobic010G017400 Sobic002G142200--Sobic010G017400 Sobic001G177900 Sobic001G177900 Sobic002G142200--Sobic001G177900 Sobic001G029800 Sobic001G029800 Sobic002G142200--Sobic001G029800 Sobic005G144600 Sobic005G144600 Sobic002G142200--Sobic005G144600 Sobic002G142200--Sobic004G287700 Sobic003G294500 Sobic003G294500 Sobic002G142200--Sobic003G294500 Sobic003G314900 Sobic003G314900 Sobic002G142200--Sobic003G314900 Sobic002G142200--Sobic009G208900 Sobic002G016400--Sobic005G098400 Sobic003G418300 Sobic003G418300 Sobic002G016400--Sobic003G418300 Sobic002G016400--Sobic007G050500 Sobic002G016400--Sobic001G305300 Sobic002G016400--Sobic001G345200 Sobic007G208100 Sobic007G208100 Sobic002G016400--Sobic007G208100 Sobic006G149300 Sobic006G149300 Sobic002G016400--Sobic006G149300 Sobic001G382700 Sobic001G382700 Sobic002G016400--Sobic001G382700 Sobic008G170400 Sobic008G170400 Sobic002G016400--Sobic008G170400 Sobic004G287700--Sobic010G017400 Sobic001G477400 Sobic001G477400 Sobic004G287700--Sobic001G477400 Sobic004G287700--Sobic002G142200 Sobic004G287700--Sobic001G177900 Sobic004G339500 Sobic004G339500 Sobic004G287700--Sobic004G339500 Sobic010G008900 Sobic010G008900 Sobic004G287700--Sobic010G008900 Sobic002G255500 Sobic002G255500 Sobic004G287700--Sobic002G255500 Sobic001G170800 Sobic001G170800 Sobic004G287700--Sobic001G170800 Sobic004G287700--Sobic003G314900 Sobic009G208900--Sobic004G233700 Sobic009G208900--Sobic005G144600 Sobic009G208900--Sobic002G142200 Sobic003G179500 Sobic003G179500 Sobic009G208900--Sobic003G179500 Sobic010G274000 Sobic010G274000 Sobic009G208900--Sobic010G274000 Sobic003G410600 Sobic003G410600 Sobic009G208900--Sobic003G410600 Sobic009G208900--Sobic007G168900 Sobic004G047100 Sobic004G047100 Sobic009G208900--Sobic004G047100 Sobic009G208900--Sobic001G177900 Sobic006G030200 Sobic006G030200 Sobic002G226500--Sobic006G030200 Sobic008G113900 Sobic008G113900 Sobic002G226500--Sobic008G113900 Sobic007G225400 Sobic007G225400 Sobic002G226500--Sobic007G225400 Sobic010G022500 Sobic010G022500 Sobic002G226500--Sobic010G022500 Sobic002G226500--Sobic002G278200 Sobic002G226500--Sobic006G149300 Sobic006G119000 Sobic006G119000 Sobic002G226500--Sobic006G119000 Sobic003G052900 Sobic003G052900 Sobic002G226500--Sobic003G052900 Sobic004G030300 Sobic004G030300 Sobic002G226500--Sobic004G030300 Sobic004G233700--Sobic009G208900 Sobic004G233700--Sobic006G105600 Sobic004G233700--Sobic005G025900 Sobic003G420100 Sobic003G420100 Sobic004G233700--Sobic003G420100 Sobic004G233700--Sobic002G142200 Sobic004G233700--Sobic005G144600 Sobic007G113300 Sobic007G113300 Sobic004G233700--Sobic007G113300 Sobic004G233700--Sobic007G168900 Sobic004G233700--Sobic002G296000 Sobic002G032500 Sobic002G032500 Sobic005G091000--Sobic002G032500 Sobic005G091000--Sobic006G105600 Sobic005G091000--Sobic001G267100 Sobic003G309400 Sobic003G309400 Sobic005G091000--Sobic003G309400 Sobic003G089300 Sobic003G089300 Sobic005G091000--Sobic003G089300 Sobic003G338200 Sobic003G338200 Sobic005G091000--Sobic003G338200 Sobic001G381100 Sobic001G381100 Sobic005G091000--Sobic001G381100 Sobic002G224200 Sobic002G224200 Sobic005G091000--Sobic002G224200 Sobic006G074900 Sobic006G074900 Sobic005G091000--Sobic006G074900
Octagon: transcription factors


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