Gene annotation
Transcriptome id Sobic.006G191900.1
Synonym Sb06g026493
Functional annotation ZR1 protein, putative, expressed
UniProt A0A1B6PMV0
Pfam PF16457 PF13713 PF01363 PF08381 PF00415
Panther DB PTHR22870 PTHR22870:SF177
NCBI CDD KOG1427; Uncharacterized conserved protein, contains RCC1 domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65920 : Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
RAP-DB (Rice) LOC_Os04g49430.1 : ZR1 protein, putative, expressed
MaizeGDB (Corn) Zm00025a010064
Brachypodium -
Barley HORVU6Hr1G066460.21 , HORVU6Hr1G066460.20 , HORVU6Hr1G066460.23 , HORVU6Hr1G066460.22 , HORVU6Hr1G066460.25 , HORVU6Hr1G066460.24 , HORVU6Hr1G066460.27 , HORVU6Hr1G066460.26 , HORVU6Hr1G066460.29 , HORVU6Hr1G066460.28 , HORVU6Hr1G066460.36 , HORVU6Hr1G066460.37 , HORVU6Hr1G066460.34 , HORVU6Hr1G066460.35 , HORVU6Hr1G066460.32 , HORVU6Hr1G066460.33 , HORVU6Hr1G066460.30 , HORVU6Hr1G066460.31 , HORVU6Hr1G066460.38 , HORVU6Hr1G066460.39 , HORVU6Hr1G066460.18 , HORVU6Hr1G066460.19 , HORVU6Hr1G066460.14 , HORVU6Hr1G066460.16 , HORVU6Hr1G066460.17 , HORVU6Hr1G066460.10 , HORVU6Hr1G066460.11 , HORVU6Hr1G066460.12 , HORVU6Hr1G066460.13 , HORVU6Hr1G066460.6 , HORVU6Hr1G066460.4 , HORVU6Hr1G066460.5 , HORVU6Hr1G066460.2 , HORVU6Hr1G066460.3 , HORVU6Hr1G066460.1 , HORVU6Hr1G066460.9
Wheat TraesCS6D02G241800 , TraesCS2D02G457000 , TraesCS2A02G456700 , TraesCS2A02G456700 , TraesCS2B02G478900 , TraesCS6B02G288400 , TraesCS6A02G261000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G124400 ATP binding protein, putative, expressed -
2 Sobic.001G477400 AUXIN SIGNALING F-BOX 2, putative, expressed -
3 Sobic.010G017400 DLT(Ortholog in rice:Tong et al. (2012))(PubMedID : 31659927)@DELLA protein SLR1, putative, expressed -
4 Sobic.002G296000 HEAT repeat family protein, putative, expressed -
5 Sobic.009G208900 expressed protein -
6 Sobic.006G105600 "domain confirmed by Pfam database, expression is supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
7 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -
8 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
9 Sobic.005G005700 inactive receptor kinase At2g26730 precursor, putative, expressed -
10 Sobic.005G144600 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
11 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
12 Sobic.002G142200 expressed protein -
13 Sobic.008G032800 heavy-metal-associated domain-containing protein, putative, expressed -
14 Sobic.001G398400 expressed protein -
15 Sobic.001G109700 expressed protein K19001: HELLS, ATP-dependent DNA helicase
16 Sobic.001G170800 "Transport protein(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659835)@transport protein-related, putative, expressed -
17 Sobic.007G027900 chloroplast unusual positioning protein, putative, expressed -
18 Sobic.002G392500 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
19 Sobic.005G000500 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
20 Sobic.004G273000 MYB family transcription factor, putative, expressed -


Gene co-expression network
sample Sobic006G191900 Sobic006G191900 Sobic006G124400 Sobic006G124400 Sobic006G191900--Sobic006G124400 Sobic001G477400 Sobic001G477400 Sobic006G191900--Sobic001G477400 Sobic010G017400 Sobic010G017400 Sobic006G191900--Sobic010G017400 Sobic002G296000 Sobic002G296000 Sobic006G191900--Sobic002G296000 Sobic009G208900 Sobic009G208900 Sobic006G191900--Sobic009G208900 Sobic006G105600 Sobic006G105600 Sobic006G191900--Sobic006G105600 Sobic008G006800 Sobic008G006800 Sobic006G191900--Sobic008G006800 Sobic004G047100 Sobic004G047100 Sobic006G191900--Sobic004G047100 Sobic005G005700 Sobic005G005700 Sobic006G191900--Sobic005G005700 Sobic006G124400--Sobic002G296000 Sobic010G105400 Sobic010G105400 Sobic006G124400--Sobic010G105400 Sobic009G101100 Sobic009G101100 Sobic006G124400--Sobic009G101100 Sobic007G027900 Sobic007G027900 Sobic006G124400--Sobic007G027900 Sobic004G273000 Sobic004G273000 Sobic006G124400--Sobic004G273000 Sobic006G124400--Sobic005G005700 Sobic006G124400--Sobic008G006800 Sobic006G124400--Sobic001G477400 Sobic001G398400 Sobic001G398400 Sobic006G124400--Sobic001G398400 Sobic001G477400--Sobic005G005700 Sobic001G477400--Sobic001G398400 Sobic001G477400--Sobic008G006800 Sobic001G477400--Sobic006G124400 Sobic004G198100 Sobic004G198100 Sobic001G477400--Sobic004G198100 Sobic010G119300 Sobic010G119300 Sobic001G477400--Sobic010G119300 Sobic001G477400--Sobic004G273000 Sobic004G271300 Sobic004G271300 Sobic001G477400--Sobic004G271300 Sobic003G260700 Sobic003G260700 Sobic001G477400--Sobic003G260700 Sobic010G017400--Sobic008G006800 Sobic010G017400--Sobic005G005700 Sobic010G017400--Sobic002G296000 Sobic001G170800 Sobic001G170800 Sobic010G017400--Sobic001G170800 Sobic001G177900 Sobic001G177900 Sobic010G017400--Sobic001G177900 Sobic010G017400--Sobic001G398400 Sobic010G017400--Sobic004G271300 Sobic007G168900 Sobic007G168900 Sobic010G017400--Sobic007G168900 Sobic010G008900 Sobic010G008900 Sobic010G017400--Sobic010G008900 Sobic002G296000--Sobic007G027900 Sobic002G296000--Sobic006G124400 Sobic002G296000--Sobic009G101100 Sobic002G296000--Sobic007G168900 Sobic002G296000--Sobic005G005700 Sobic002G296000--Sobic008G006800 Sobic002G296000--Sobic004G271300 Sobic002G296000--Sobic010G017400 Sobic008G083500 Sobic008G083500 Sobic002G296000--Sobic008G083500 Sobic004G233700 Sobic004G233700 Sobic009G208900--Sobic004G233700 Sobic005G144600 Sobic005G144600 Sobic009G208900--Sobic005G144600 Sobic002G142200 Sobic002G142200 Sobic009G208900--Sobic002G142200 Sobic003G179500 Sobic003G179500 Sobic009G208900--Sobic003G179500 Sobic010G274000 Sobic010G274000 Sobic009G208900--Sobic010G274000 Sobic003G410600 Sobic003G410600 Sobic009G208900--Sobic003G410600 Sobic009G208900--Sobic007G168900 Sobic009G208900--Sobic004G047100 Sobic009G208900--Sobic001G177900 Sobic005G091000 Sobic005G091000 Sobic006G105600--Sobic005G091000 Sobic001G267100 Sobic001G267100 Sobic006G105600--Sobic001G267100 Sobic006G105600--Sobic006G124400 Sobic006G105600--Sobic002G296000 Sobic009G137500 Sobic009G137500 Sobic006G105600--Sobic009G137500 Sobic002G394500 Sobic002G394500 Sobic006G105600--Sobic002G394500 Sobic006G105600--Sobic004G233700 Sobic006G105600--Sobic008G083500 Sobic001G304800 Sobic001G304800 Sobic006G105600--Sobic001G304800 Sobic008G006800--Sobic005G005700 Sobic008G006800--Sobic010G119300 Sobic008G006800--Sobic003G260700 Sobic008G006800--Sobic001G398400 Sobic004G339500 Sobic004G339500 Sobic008G006800--Sobic004G339500 Sobic008G006800--Sobic010G017400 Sobic008G006800--Sobic004G271300 Sobic002G313000 Sobic002G313000 Sobic008G006800--Sobic002G313000 Sobic008G006800--Sobic002G296000 Sobic004G047100--Sobic010G105400 Sobic004G047100--Sobic005G144600 Sobic009G181500 Sobic009G181500 Sobic004G047100--Sobic009G181500 Sobic002G246900 Sobic002G246900 Sobic004G047100--Sobic002G246900 Sobic002G426800 Sobic002G426800 Sobic004G047100--Sobic002G426800 Sobic004G047100--Sobic003G179500 Sobic001G091500 Sobic001G091500 Sobic004G047100--Sobic001G091500 Sobic006G116500 Sobic006G116500 Sobic004G047100--Sobic006G116500 Sobic003G387700 Sobic003G387700 Sobic004G047100--Sobic003G387700 Sobic005G005700--Sobic008G006800 Sobic005G005700--Sobic004G271300 Sobic005G005700--Sobic010G017400 Sobic005G005700--Sobic002G296000 Sobic005G005700--Sobic001G398400 Sobic005G005700--Sobic010G119300 Sobic005G005700--Sobic003G260700 Sobic005G005700--Sobic007G027900 Sobic005G005700--Sobic007G168900
Octagon: transcription factors


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