Gene annotation
Transcriptome id Sobic.008G032800.1
Synonym Sb08g002810
Functional annotation heavy-metal-associated domain-containing protein, putative, expressed
UniProt C5YRN0
Pfam PF00403
Panther DB PTHR22814 PTHR22814:SF33
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G06130 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os11g05010.2 : heavy-metal-associated domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a013034 , Zm00025a053845
Brachypodium KQJ92325 , KQJ92326 , KQJ92327
Barley HORVU4Hr1G025770.4 , HORVU4Hr1G025770.6 , HORVU5Hr1G040920.1 , HORVU5Hr1G040920.2
Wheat TraesCS5D02G141600 , TraesCS4A02G184700 , TraesCS4D02G128900 , TraesCS5B02G131600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G027900 chloroplast unusual positioning protein, putative, expressed -
2 Sobic.009G101100 patellin protein, putative, expressed -
3 Sobic.001G477400 AUXIN SIGNALING F-BOX 2, putative, expressed -
4 Sobic.006G124400 ATP binding protein, putative, expressed -
5 Sobic.002G296000 HEAT repeat family protein, putative, expressed -
6 Sobic.010G017400 DLT(Ortholog in rice:Tong et al. (2012))(PubMedID : 31659927)@DELLA protein SLR1, putative, expressed -
7 Sobic.005G005700 inactive receptor kinase At2g26730 precursor, putative, expressed -
8 Sobic.009G143200 DUF630/DUF632 domains containing protein, putative, expressed -
9 Sobic.004G273000 MYB family transcription factor, putative, expressed -
10 Sobic.006G281400 expressed protein -
11 Sobic.001G398400 expressed protein -
12 Sobic.004G271300 DNA topoisomerase 2, putative, expressed K03164: DNA topoisomerase II
13 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
14 Sobic.002G204400 kinesin motor protein-related, putative, expressed K11498: centromeric protein E
15 Sobic.004G198100 expressed protein -
16 Sobic.001G446400 receptor protein kinase CLAVATA1 precursor, putative, expressed -
17 Sobic.009G184200 RecF/RecN/SMC N terminal domain containing protein, expressed K06675: structural maintenance of chromosome 4
18 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -
19 Sobic.010G261700 SHI, putative, expressed -
20 Sobic.001G131300 centromere protein, putative, expressed -


Gene co-expression network
sample Sobic008G032800 Sobic008G032800 Sobic007G027900 Sobic007G027900 Sobic008G032800--Sobic007G027900 Sobic009G101100 Sobic009G101100 Sobic008G032800--Sobic009G101100 Sobic001G477400 Sobic001G477400 Sobic008G032800--Sobic001G477400 Sobic006G124400 Sobic006G124400 Sobic008G032800--Sobic006G124400 Sobic002G296000 Sobic002G296000 Sobic008G032800--Sobic002G296000 Sobic010G017400 Sobic010G017400 Sobic008G032800--Sobic010G017400 Sobic005G005700 Sobic005G005700 Sobic008G032800--Sobic005G005700 Sobic009G143200 Sobic009G143200 Sobic008G032800--Sobic009G143200 Sobic004G273000 Sobic004G273000 Sobic008G032800--Sobic004G273000 Sobic007G027900--Sobic002G296000 Sobic007G027900--Sobic005G005700 Sobic004G271300 Sobic004G271300 Sobic007G027900--Sobic004G271300 Sobic007G027900--Sobic009G101100 Sobic002G204400 Sobic002G204400 Sobic007G027900--Sobic002G204400 Sobic007G027900--Sobic006G124400 Sobic008G006800 Sobic008G006800 Sobic007G027900--Sobic008G006800 Sobic007G168900 Sobic007G168900 Sobic007G027900--Sobic007G168900 Sobic001G398400 Sobic001G398400 Sobic007G027900--Sobic001G398400 Sobic009G101100--Sobic002G296000 Sobic009G101100--Sobic006G124400 Sobic009G101100--Sobic007G027900 Sobic003G032200 Sobic003G032200 Sobic009G101100--Sobic003G032200 Sobic006G221300 Sobic006G221300 Sobic009G101100--Sobic006G221300 Sobic001G304800 Sobic001G304800 Sobic009G101100--Sobic001G304800 Sobic008G083500 Sobic008G083500 Sobic009G101100--Sobic008G083500 Sobic006G105600 Sobic006G105600 Sobic009G101100--Sobic006G105600 Sobic010G105400 Sobic010G105400 Sobic009G101100--Sobic010G105400 Sobic001G477400--Sobic005G005700 Sobic001G477400--Sobic001G398400 Sobic001G477400--Sobic008G006800 Sobic001G477400--Sobic006G124400 Sobic004G198100 Sobic004G198100 Sobic001G477400--Sobic004G198100 Sobic010G119300 Sobic010G119300 Sobic001G477400--Sobic010G119300 Sobic001G477400--Sobic004G273000 Sobic001G477400--Sobic004G271300 Sobic003G260700 Sobic003G260700 Sobic001G477400--Sobic003G260700 Sobic006G124400--Sobic002G296000 Sobic006G124400--Sobic010G105400 Sobic006G124400--Sobic009G101100 Sobic006G124400--Sobic007G027900 Sobic006G124400--Sobic004G273000 Sobic006G124400--Sobic005G005700 Sobic006G124400--Sobic008G006800 Sobic006G124400--Sobic001G477400 Sobic006G124400--Sobic001G398400 Sobic002G296000--Sobic007G027900 Sobic002G296000--Sobic006G124400 Sobic002G296000--Sobic009G101100 Sobic002G296000--Sobic007G168900 Sobic002G296000--Sobic005G005700 Sobic002G296000--Sobic008G006800 Sobic002G296000--Sobic004G271300 Sobic002G296000--Sobic010G017400 Sobic002G296000--Sobic008G083500 Sobic010G017400--Sobic008G006800 Sobic010G017400--Sobic005G005700 Sobic010G017400--Sobic002G296000 Sobic001G170800 Sobic001G170800 Sobic010G017400--Sobic001G170800 Sobic001G177900 Sobic001G177900 Sobic010G017400--Sobic001G177900 Sobic010G017400--Sobic001G398400 Sobic010G017400--Sobic004G271300 Sobic010G017400--Sobic007G168900 Sobic010G008900 Sobic010G008900 Sobic010G017400--Sobic010G008900 Sobic005G005700--Sobic008G006800 Sobic005G005700--Sobic004G271300 Sobic005G005700--Sobic010G017400 Sobic005G005700--Sobic002G296000 Sobic005G005700--Sobic001G398400 Sobic005G005700--Sobic010G119300 Sobic005G005700--Sobic003G260700 Sobic005G005700--Sobic007G027900 Sobic005G005700--Sobic007G168900 Sobic005G157300 Sobic005G157300 Sobic009G143200--Sobic005G157300 Sobic004G317000 Sobic004G317000 Sobic009G143200--Sobic004G317000 Sobic001G054700 Sobic001G054700 Sobic009G143200--Sobic001G054700 Sobic003G055600 Sobic003G055600 Sobic009G143200--Sobic003G055600 Sobic009G143200--Sobic006G221300 Sobic009G077300 Sobic009G077300 Sobic009G143200--Sobic009G077300 Sobic004G108400 Sobic004G108400 Sobic009G143200--Sobic004G108400 Sobic004G052200 Sobic004G052200 Sobic009G143200--Sobic004G052200 Sobic007G187700 Sobic007G187700 Sobic009G143200--Sobic007G187700 Sobic004G273000--Sobic006G124400 Sobic004G273000--Sobic001G477400 Sobic002G392500 Sobic002G392500 Sobic004G273000--Sobic002G392500 Sobic004G273000--Sobic007G027900 Sobic004G273000--Sobic010G105400 Sobic004G273000--Sobic002G296000 Sobic001G289900 Sobic001G289900 Sobic004G273000--Sobic001G289900 Sobic010G261700 Sobic010G261700 Sobic004G273000--Sobic010G261700 Sobic004G273000--Sobic005G005700
Octagon: transcription factors


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