Gene annotation
Transcriptome id Sobic.001G446400.1
Synonym Sb01g041950, BAM1
Functional annotation receptor protein kinase CLAVATA1 precursor, putative, expressed
UniProt A0A1B6QPI7
Pfam PF08263 PF00560 PF00069
Panther DB PTHR27000 PTHR27000:SF91
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G49670 : Leucine-rich receptor-like protein kinase family protein
RAP-DB (Rice) LOC_Os03g12730.1 : receptor protein kinase CLAVATA1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a004854 , Zm00025a018680 , Zm00025a006146 , Zm00025a025091 , Zm00025a018497 , Zm00025a001429 , Zm00025a029520 , Zm00025a033822 , Zm00025a015548
Brachypodium KQJ88869 , PNT68408 , KQK22738 , KQJ98144
Barley HORVU4Hr1G065620.3 , HORVU4Hr1G065620.2 , HORVU4Hr1G065620.1 , HORVU1Hr1G039400.3 , HORVU1Hr1G039400.2 , HORVU1Hr1G039400.1 , HORVU4Hr1G015710.2 , HORVU4Hr1G015710.3 , HORVU4Hr1G015710.4 , HORVU4Hr1G015710.5 , HORVU0Hr1G022670.4 , HORVU0Hr1G022670.1 , HORVU0Hr1G022670.3 , HORVU0Hr1G022670.2 , HORVU1Hr1G095340.6 , HORVU1Hr1G095340.4 , HORVU1Hr1G095340.2 , HORVU1Hr1G095340.3 , HORVU1Hr1G095340.1 , HORVU1Hr1G039500.6 , HORVU1Hr1G039500.4 , HORVU1Hr1G039500.5 , HORVU1Hr1G039500.2 , HORVU1Hr1G039500.3 , HORVU1Hr1G039500.1
Wheat TraesCS1B02G167400 , TraesCS1B02G167500 , TraesCS1A02G149500 , TraesCS7A02G533800 , TraesCS1A02G149400 , TraesCS7D02G521200 , TraesCS7D02G521200 , TraesCS1D02G146700 , TraesCS4A02G224800 , TraesCS4B02G234600 , TraesCS4D02G235800 , TraesCS4A02G059000 , TraesCS4B02G091400 , TraesCS4D02G088400 , TraesCS1D02G146800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G027900 chloroplast unusual positioning protein, putative, expressed -
2 Sobic.009G143200 DUF630/DUF632 domains containing protein, putative, expressed -
3 Sobic.002G296000 HEAT repeat family protein, putative, expressed -
4 Sobic.008G032800 heavy-metal-associated domain-containing protein, putative, expressed -
5 Sobic.003G393100 chromosome segregation protein, putative, expressed K06674: structural maintenance of chromosome 2
6 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
7 Sobic.005G005700 inactive receptor kinase At2g26730 precursor, putative, expressed -
8 Sobic.010G248500 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
9 Sobic.007G162400 ABC-2 type transporter domain containing protein, expressed -
10 Sobic.001G398400 expressed protein -
11 Sobic.004G273000 MYB family transcription factor, putative, expressed -
12 Sobic.006G124400 ATP binding protein, putative, expressed -
13 Sobic.001G101700 OsGIF1(Ortholog in rice:He et al. (2017))(PubMedID : 31659832)@GRF-interacting factor 1, putative, expressed -
14 Sobic.006G281400 expressed protein -
15 Sobic.009G101100 patellin protein, putative, expressed -
16 Sobic.007G121600 - -
17 Sobic.006G221300 expressed protein -
18 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -
19 Sobic.010G017400 DLT(Ortholog in rice:Tong et al. (2012))(PubMedID : 31659927)@DELLA protein SLR1, putative, expressed -
20 Sobic.009G184200 RecF/RecN/SMC N terminal domain containing protein, expressed K06675: structural maintenance of chromosome 4


Gene co-expression network
sample Sobic001G446400 Sobic001G446400 Sobic007G027900 Sobic007G027900 Sobic001G446400--Sobic007G027900 Sobic009G143200 Sobic009G143200 Sobic001G446400--Sobic009G143200 Sobic002G296000 Sobic002G296000 Sobic001G446400--Sobic002G296000 Sobic008G032800 Sobic008G032800 Sobic001G446400--Sobic008G032800 Sobic003G393100 Sobic003G393100 Sobic001G446400--Sobic003G393100 Sobic001G054700 Sobic001G054700 Sobic001G446400--Sobic001G054700 Sobic005G005700 Sobic005G005700 Sobic001G446400--Sobic005G005700 Sobic010G248500 Sobic010G248500 Sobic001G446400--Sobic010G248500 Sobic007G162400 Sobic007G162400 Sobic001G446400--Sobic007G162400 Sobic007G027900--Sobic002G296000 Sobic007G027900--Sobic005G005700 Sobic004G271300 Sobic004G271300 Sobic007G027900--Sobic004G271300 Sobic009G101100 Sobic009G101100 Sobic007G027900--Sobic009G101100 Sobic002G204400 Sobic002G204400 Sobic007G027900--Sobic002G204400 Sobic006G124400 Sobic006G124400 Sobic007G027900--Sobic006G124400 Sobic008G006800 Sobic008G006800 Sobic007G027900--Sobic008G006800 Sobic007G168900 Sobic007G168900 Sobic007G027900--Sobic007G168900 Sobic001G398400 Sobic001G398400 Sobic007G027900--Sobic001G398400 Sobic005G157300 Sobic005G157300 Sobic009G143200--Sobic005G157300 Sobic004G317000 Sobic004G317000 Sobic009G143200--Sobic004G317000 Sobic009G143200--Sobic001G054700 Sobic003G055600 Sobic003G055600 Sobic009G143200--Sobic003G055600 Sobic006G221300 Sobic006G221300 Sobic009G143200--Sobic006G221300 Sobic009G077300 Sobic009G077300 Sobic009G143200--Sobic009G077300 Sobic004G108400 Sobic004G108400 Sobic009G143200--Sobic004G108400 Sobic004G052200 Sobic004G052200 Sobic009G143200--Sobic004G052200 Sobic007G187700 Sobic007G187700 Sobic009G143200--Sobic007G187700 Sobic002G296000--Sobic007G027900 Sobic002G296000--Sobic006G124400 Sobic002G296000--Sobic009G101100 Sobic002G296000--Sobic007G168900 Sobic002G296000--Sobic005G005700 Sobic002G296000--Sobic008G006800 Sobic002G296000--Sobic004G271300 Sobic010G017400 Sobic010G017400 Sobic002G296000--Sobic010G017400 Sobic008G083500 Sobic008G083500 Sobic002G296000--Sobic008G083500 Sobic008G032800--Sobic007G027900 Sobic008G032800--Sobic009G101100 Sobic001G477400 Sobic001G477400 Sobic008G032800--Sobic001G477400 Sobic008G032800--Sobic006G124400 Sobic008G032800--Sobic002G296000 Sobic008G032800--Sobic010G017400 Sobic008G032800--Sobic005G005700 Sobic008G032800--Sobic009G143200 Sobic004G273000 Sobic004G273000 Sobic008G032800--Sobic004G273000 Sobic009G184200 Sobic009G184200 Sobic003G393100--Sobic009G184200 Sobic003G393100--Sobic002G204400 Sobic003G369200 Sobic003G369200 Sobic003G393100--Sobic003G369200 Sobic003G393100--Sobic001G398400 Sobic008G148000 Sobic008G148000 Sobic003G393100--Sobic008G148000 Sobic006G281400 Sobic006G281400 Sobic003G393100--Sobic006G281400 Sobic008G070700 Sobic008G070700 Sobic003G393100--Sobic008G070700 Sobic007G007800 Sobic007G007800 Sobic003G393100--Sobic007G007800 Sobic004G321400 Sobic004G321400 Sobic003G393100--Sobic004G321400 Sobic001G054700--Sobic006G221300 Sobic001G054700--Sobic009G077300 Sobic001G054700--Sobic004G108400 Sobic001G054700--Sobic009G143200 Sobic002G050700 Sobic002G050700 Sobic001G054700--Sobic002G050700 Sobic001G054700--Sobic006G124400 Sobic009G127800 Sobic009G127800 Sobic001G054700--Sobic009G127800 Sobic005G153000 Sobic005G153000 Sobic001G054700--Sobic005G153000 Sobic006G221800 Sobic006G221800 Sobic001G054700--Sobic006G221800 Sobic005G005700--Sobic008G006800 Sobic005G005700--Sobic004G271300 Sobic005G005700--Sobic010G017400 Sobic005G005700--Sobic002G296000 Sobic005G005700--Sobic001G398400 Sobic010G119300 Sobic010G119300 Sobic005G005700--Sobic010G119300 Sobic003G260700 Sobic003G260700 Sobic005G005700--Sobic003G260700 Sobic005G005700--Sobic007G027900 Sobic005G005700--Sobic007G168900 Sobic010G248500--Sobic001G446400 Sobic010G165900 Sobic010G165900 Sobic010G248500--Sobic010G165900 Sobic008G127550 Sobic008G127550 Sobic010G248500--Sobic008G127550 Sobic010G248500--Sobic008G032800 Sobic003G204200 Sobic003G204200 Sobic010G248500--Sobic003G204200 Sobic005G108225 Sobic005G108225 Sobic010G248500--Sobic005G108225 Sobic002G255500 Sobic002G255500 Sobic010G248500--Sobic002G255500 Sobic010G248500--Sobic001G398400 Sobic004G198100 Sobic004G198100 Sobic010G248500--Sobic004G198100 Sobic007G162400--Sobic006G221300 Sobic007G162400--Sobic009G127800 Sobic007G162400--Sobic001G054700 Sobic007G162400--Sobic004G108400 Sobic001G101700 Sobic001G101700 Sobic007G162400--Sobic001G101700 Sobic002G027600 Sobic002G027600 Sobic007G162400--Sobic002G027600 Sobic007G201900 Sobic007G201900 Sobic007G162400--Sobic007G201900 Sobic003G290400 Sobic003G290400 Sobic007G162400--Sobic003G290400 Sobic007G162400--Sobic009G143200
Octagon: transcription factors


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