Gene annotation
Transcriptome id Sobic.007G162400.1
Synonym Sb07g023550
Functional annotation ABC-2 type transporter domain containing protein, expressed
UniProt Q9XEP5 , C5YMQ7
Pfam PF00005 PF01061
Panther DB PTHR19241 PTHR19241:SF290
NCBI CDD KOG0061; Transporter, ABC superfamily (Breast cancer resistance protein)
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT4G25750 : ABC-2 type transporter family protein
RAP-DB (Rice) LOC_Os06g30730.1 : ABC-2 type transporter domain containing protein, expressed
MaizeGDB (Corn) Zm00025a049532
Brachypodium KQK18276
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G162400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G221300 expressed protein -
2 Sobic.009G127800 BZIP protein, putative, expressed -
3 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
4 Sobic.004G108400 heavy-metal-associated domain-containing protein, putative, expressed -
5 Sobic.001G101700 OsGIF1(Ortholog in rice:He et al. (2017))(PubMedID : 31659832)@GRF-interacting factor 1, putative, expressed -
6 Sobic.002G027600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
7 Sobic.007G201900 expressed protein -
8 Sobic.003G290400 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
9 Sobic.009G143200 DUF630/DUF632 domains containing protein, putative, expressed -
10 Sobic.002G279400 DUF630/DUF632 domains containing protein, putative, expressed -
11 Sobic.009G057800 kelch repeat-containing protein, putative, expressed -
12 Sobic.004G317000 growth regulating factor protein, putative, expressed -
13 Sobic.010G185300 AP2 domain containing protein, expressed -
14 Sobic.004G282601 - -
15 Sobic.005G157300 protein binding protein, putative, expressed -
16 Sobic.002G112000 protein binding protein, putative, expressed -
17 Sobic.005G153000 agenet domain containing protein, expressed -
18 Sobic.010G255000 uncharacterized protein At4g06744 precursor, putative, expressed -
19 Sobic.004G234500 eukaryotic aspartyl protease domain containing protein, expressed -
20 Sobic.001G446400 receptor protein kinase CLAVATA1 precursor, putative, expressed -


Gene co-expression network
sample Sobic007G162400 Sobic007G162400 Sobic006G221300 Sobic006G221300 Sobic007G162400--Sobic006G221300 Sobic009G127800 Sobic009G127800 Sobic007G162400--Sobic009G127800 Sobic001G054700 Sobic001G054700 Sobic007G162400--Sobic001G054700 Sobic004G108400 Sobic004G108400 Sobic007G162400--Sobic004G108400 Sobic001G101700 Sobic001G101700 Sobic007G162400--Sobic001G101700 Sobic002G027600 Sobic002G027600 Sobic007G162400--Sobic002G027600 Sobic007G201900 Sobic007G201900 Sobic007G162400--Sobic007G201900 Sobic003G290400 Sobic003G290400 Sobic007G162400--Sobic003G290400 Sobic009G143200 Sobic009G143200 Sobic007G162400--Sobic009G143200 Sobic006G221300--Sobic009G127800 Sobic006G221300--Sobic001G054700 Sobic009G077300 Sobic009G077300 Sobic006G221300--Sobic009G077300 Sobic005G153000 Sobic005G153000 Sobic006G221300--Sobic005G153000 Sobic006G221300--Sobic009G143200 Sobic006G221300--Sobic004G108400 Sobic004G052200 Sobic004G052200 Sobic006G221300--Sobic004G052200 Sobic009G225500 Sobic009G225500 Sobic006G221300--Sobic009G225500 Sobic008G052300 Sobic008G052300 Sobic006G221300--Sobic008G052300 Sobic009G127800--Sobic006G221300 Sobic009G127800--Sobic009G225500 Sobic009G127800--Sobic001G054700 Sobic006G142500 Sobic006G142500 Sobic009G127800--Sobic006G142500 Sobic009G127800--Sobic008G052300 Sobic002G279400 Sobic002G279400 Sobic009G127800--Sobic002G279400 Sobic009G127800--Sobic007G162400 Sobic009G127800--Sobic002G027600 Sobic005G157300 Sobic005G157300 Sobic009G127800--Sobic005G157300 Sobic001G054700--Sobic006G221300 Sobic001G054700--Sobic009G077300 Sobic001G054700--Sobic004G108400 Sobic001G054700--Sobic009G143200 Sobic002G050700 Sobic002G050700 Sobic001G054700--Sobic002G050700 Sobic006G124400 Sobic006G124400 Sobic001G054700--Sobic006G124400 Sobic001G054700--Sobic009G127800 Sobic001G054700--Sobic005G153000 Sobic006G221800 Sobic006G221800 Sobic001G054700--Sobic006G221800 Sobic004G108400--Sobic001G054700 Sobic004G108400--Sobic006G221300 Sobic004G108400--Sobic009G143200 Sobic001G452900 Sobic001G452900 Sobic004G108400--Sobic001G452900 Sobic007G008300 Sobic007G008300 Sobic004G108400--Sobic007G008300 Sobic004G108400--Sobic009G127800 Sobic004G108400--Sobic007G162400 Sobic004G108400--Sobic002G050700 Sobic009G101100 Sobic009G101100 Sobic004G108400--Sobic009G101100 Sobic001G101700--Sobic006G221800 Sobic010G255000 Sobic010G255000 Sobic001G101700--Sobic010G255000 Sobic004G003700 Sobic004G003700 Sobic001G101700--Sobic004G003700 Sobic007G147200 Sobic007G147200 Sobic001G101700--Sobic007G147200 Sobic001G101700--Sobic007G201900 Sobic007G209200 Sobic007G209200 Sobic001G101700--Sobic007G209200 Sobic008G151600 Sobic008G151600 Sobic001G101700--Sobic008G151600 Sobic009G057800 Sobic009G057800 Sobic001G101700--Sobic009G057800 Sobic001G143400 Sobic001G143400 Sobic001G101700--Sobic001G143400 Sobic002G006100 Sobic002G006100 Sobic002G027600--Sobic002G006100 Sobic006G272800 Sobic006G272800 Sobic002G027600--Sobic006G272800 Sobic004G267600 Sobic004G267600 Sobic002G027600--Sobic004G267600 Sobic005G032600 Sobic005G032600 Sobic002G027600--Sobic005G032600 Sobic002G284100 Sobic002G284100 Sobic002G027600--Sobic002G284100 Sobic002G027600--Sobic006G142500 Sobic002G027600--Sobic009G127800 Sobic003G351900 Sobic003G351900 Sobic002G027600--Sobic003G351900 Sobic001G079900 Sobic001G079900 Sobic002G027600--Sobic001G079900 Sobic007G201900--Sobic009G057800 Sobic007G201900--Sobic001G101700 Sobic007G201900--Sobic010G255000 Sobic002G112000 Sobic002G112000 Sobic007G201900--Sobic002G112000 Sobic007G201900--Sobic002G279400 Sobic001G101900 Sobic001G101900 Sobic007G201900--Sobic001G101900 Sobic003G244000 Sobic003G244000 Sobic007G201900--Sobic003G244000 Sobic007G201900--Sobic009G143200 Sobic007G201900--Sobic007G147200 Sobic003G290400--Sobic005G153000 Sobic009G002200 Sobic009G002200 Sobic003G290400--Sobic009G002200 Sobic004G282601 Sobic004G282601 Sobic003G290400--Sobic004G282601 Sobic003G290400--Sobic009G077300 Sobic003G290400--Sobic006G221300 Sobic003G290400--Sobic002G027600 Sobic006G135800 Sobic006G135800 Sobic003G290400--Sobic006G135800 Sobic003G290400--Sobic007G162400 Sobic003G259300 Sobic003G259300 Sobic003G290400--Sobic003G259300 Sobic009G143200--Sobic005G157300 Sobic004G317000 Sobic004G317000 Sobic009G143200--Sobic004G317000 Sobic009G143200--Sobic001G054700 Sobic003G055600 Sobic003G055600 Sobic009G143200--Sobic003G055600 Sobic009G143200--Sobic006G221300 Sobic009G143200--Sobic009G077300 Sobic009G143200--Sobic004G108400 Sobic009G143200--Sobic004G052200 Sobic007G187700 Sobic007G187700 Sobic009G143200--Sobic007G187700
Octagon: transcription factors


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