Gene annotation
Transcriptome id Sobic.010G185300.1
Synonym Sb10g023600, SHN1, WIN1
Functional annotation AP2 domain containing protein, expressed
UniProt C5Z5N4
Pfam PF00847
Panther DB PTHR31194:SF10 PTHR31194
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003700; DNA-binding transcription factor activity GO:0006355regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT1G15360 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os02g10760.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a019536 , Zm00025a032925 , Zm00025a051285 , Zm00025a042228 , Zm00025a049794
Brachypodium KQK19294 , KQK17764 , KQK01160 , KQJ85074
Barley HORVU7Hr1G029870.1 , HORVU7Hr1G029870.3 , HORVU7Hr1G029870.2 , HORVU7Hr1G029870.4 , HORVU7Hr1G089930.8 , HORVU7Hr1G089930.2 , HORVU7Hr1G089930.3 , HORVU7Hr1G089930.1 , HORVU7Hr1G089930.6 , HORVU7Hr1G089930.7 , HORVU7Hr1G089930.4 , HORVU7Hr1G089930.5 , HORVU6Hr1G085850.4 , HORVU6Hr1G085850.5 , HORVU6Hr1G085850.6 , HORVU6Hr1G085850.2 , HORVU6Hr1G085850.3 , HORVU6Hr1G038120.1 , HORVU6Hr1G038120.2 , HORVU6Hr1G038120.3 , HORVU6Hr1G038120.4 , HORVU6Hr1G038120.5 , HORVU6Hr1G038120.6 , HORVU6Hr1G038120.7
Wheat TraesCS6B02G210300 , TraesCS6A02G360300 , TraesCS7D02G147200 , TraesCS7A02G376300 , TraesCS7D02G372700 , TraesCS7A02G145800 , TraesCS7B02G277800 , TraesCS7D02G147100 , TraesCS6D02G343800 , TraesCS6A02G181400 , TraesCS6A02G181400 , TraesCS7B02G048100 , TraesCS6B02G393200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G343700 serine/threonine-protein kinase, putative, expressed -
2 Sobic.003G387300 ABC-2 type transporter domain containing protein, expressed -
3 Sobic.002G027600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
4 Sobic.002G279400 DUF630/DUF632 domains containing protein, putative, expressed -
5 Sobic.007G162400 ABC-2 type transporter domain containing protein, expressed -
6 Sobic.004G234500 eukaryotic aspartyl protease domain containing protein, expressed -
7 Sobic.003G011200 expressed protein -
8 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
9 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
10 Sobic.009G057800 kelch repeat-containing protein, putative, expressed -
11 Sobic.004G246500 ATMAP70 protein, putative, expressed -
12 Sobic.007G201900 expressed protein -
13 Sobic.003G019900 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.008G151600 PMR5, putative, expressed -
15 Sobic.010G077000 "Upregulated in leave and stem in response to drouht stress, not expredded in roots"(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
16 Sobic.001G439800 Subtilisin-like serine protease 2("PubMedID : 26759170,PubMedID : 24597475")@OsSub28 - Putative Subtilisin homologue, expressed -
17 Sobic.001G101700 OsGIF1(Ortholog in rice:He et al. (2017))(PubMedID : 31659832)@GRF-interacting factor 1, putative, expressed -
18 Sobic.007G121600 - -
19 Sobic.001G079900 expressed protein -
20 Sobic.002G050700 tesmin/TSO1-like CXC domain containing protein, expressed -


Gene co-expression network
sample Sobic010G185300 Sobic010G185300 Sobic004G343700 Sobic004G343700 Sobic010G185300--Sobic004G343700 Sobic003G387300 Sobic003G387300 Sobic010G185300--Sobic003G387300 Sobic002G027600 Sobic002G027600 Sobic010G185300--Sobic002G027600 Sobic002G279400 Sobic002G279400 Sobic010G185300--Sobic002G279400 Sobic007G162400 Sobic007G162400 Sobic010G185300--Sobic007G162400 Sobic004G234500 Sobic004G234500 Sobic010G185300--Sobic004G234500 Sobic003G011200 Sobic003G011200 Sobic010G185300--Sobic003G011200 Sobic005G062600 Sobic005G062600 Sobic010G185300--Sobic005G062600 Sobic007G147200 Sobic007G147200 Sobic010G185300--Sobic007G147200 Sobic003G373900 Sobic003G373900 Sobic004G343700--Sobic003G373900 Sobic004G246500 Sobic004G246500 Sobic004G343700--Sobic004G246500 Sobic003G019900 Sobic003G019900 Sobic004G343700--Sobic003G019900 Sobic001G271600 Sobic001G271600 Sobic004G343700--Sobic001G271600 Sobic004G343700--Sobic010G185300 Sobic010G269700 Sobic010G269700 Sobic004G343700--Sobic010G269700 Sobic004G343700--Sobic004G234500 Sobic006G274200 Sobic006G274200 Sobic004G343700--Sobic006G274200 Sobic004G343700--Sobic007G147200 Sobic003G387300--Sobic010G185300 Sobic003G387300--Sobic002G279400 Sobic003G387300--Sobic007G162400 Sobic003G387300--Sobic002G027600 Sobic001G030100 Sobic001G030100 Sobic003G387300--Sobic001G030100 Sobic004G108400 Sobic004G108400 Sobic003G387300--Sobic004G108400 Sobic007G201900 Sobic007G201900 Sobic003G387300--Sobic007G201900 Sobic004G266800 Sobic004G266800 Sobic003G387300--Sobic004G266800 Sobic010G255000 Sobic010G255000 Sobic003G387300--Sobic010G255000 Sobic002G006100 Sobic002G006100 Sobic002G027600--Sobic002G006100 Sobic006G272800 Sobic006G272800 Sobic002G027600--Sobic006G272800 Sobic004G267600 Sobic004G267600 Sobic002G027600--Sobic004G267600 Sobic005G032600 Sobic005G032600 Sobic002G027600--Sobic005G032600 Sobic002G284100 Sobic002G284100 Sobic002G027600--Sobic002G284100 Sobic006G142500 Sobic006G142500 Sobic002G027600--Sobic006G142500 Sobic009G127800 Sobic009G127800 Sobic002G027600--Sobic009G127800 Sobic003G351900 Sobic003G351900 Sobic002G027600--Sobic003G351900 Sobic001G079900 Sobic001G079900 Sobic002G027600--Sobic001G079900 Sobic002G279400--Sobic007G201900 Sobic009G057800 Sobic009G057800 Sobic002G279400--Sobic009G057800 Sobic002G279400--Sobic009G127800 Sobic006G221300 Sobic006G221300 Sobic002G279400--Sobic006G221300 Sobic005G153000 Sobic005G153000 Sobic002G279400--Sobic005G153000 Sobic001G101700 Sobic001G101700 Sobic002G279400--Sobic001G101700 Sobic009G188500 Sobic009G188500 Sobic002G279400--Sobic009G188500 Sobic001G054700 Sobic001G054700 Sobic002G279400--Sobic001G054700 Sobic009G208300 Sobic009G208300 Sobic002G279400--Sobic009G208300 Sobic007G162400--Sobic006G221300 Sobic007G162400--Sobic009G127800 Sobic007G162400--Sobic001G054700 Sobic007G162400--Sobic004G108400 Sobic007G162400--Sobic001G101700 Sobic007G162400--Sobic002G027600 Sobic007G162400--Sobic007G201900 Sobic003G290400 Sobic003G290400 Sobic007G162400--Sobic003G290400 Sobic009G143200 Sobic009G143200 Sobic007G162400--Sobic009G143200 Sobic010G023400 Sobic010G023400 Sobic004G234500--Sobic010G023400 Sobic004G234500--Sobic006G142500 Sobic010G086000 Sobic010G086000 Sobic004G234500--Sobic010G086000 Sobic004G234500--Sobic004G246500 Sobic004G234500--Sobic004G267600 Sobic004G234500--Sobic009G127800 Sobic004G234500--Sobic006G274200 Sobic004G234500--Sobic002G027600 Sobic002G317700 Sobic002G317700 Sobic004G234500--Sobic002G317700 Sobic003G011200--Sobic010G185300 Sobic003G011200--Sobic007G201900 Sobic003G011200--Sobic002G279400 Sobic003G011200--Sobic007G162400 Sobic003G011200--Sobic009G057800 Sobic007G121200 Sobic007G121200 Sobic003G011200--Sobic007G121200 Sobic002G112000 Sobic002G112000 Sobic003G011200--Sobic002G112000 Sobic003G011200--Sobic003G387300 Sobic003G011200--Sobic001G101700 Sobic005G062600--Sobic004G267600 Sobic010G092400 Sobic010G092400 Sobic005G062600--Sobic010G092400 Sobic007G121600 Sobic007G121600 Sobic005G062600--Sobic007G121600 Sobic005G062600--Sobic001G079900 Sobic010G129700 Sobic010G129700 Sobic005G062600--Sobic010G129700 Sobic007G161600 Sobic007G161600 Sobic005G062600--Sobic007G161600 Sobic001G493900 Sobic001G493900 Sobic005G062600--Sobic001G493900 Sobic008G070700 Sobic008G070700 Sobic005G062600--Sobic008G070700 Sobic005G062600--Sobic003G019900 Sobic010G070900 Sobic010G070900 Sobic007G147200--Sobic010G070900 Sobic007G147200--Sobic010G255000 Sobic004G003700 Sobic004G003700 Sobic007G147200--Sobic004G003700 Sobic003G046400 Sobic003G046400 Sobic007G147200--Sobic003G046400 Sobic006G163300 Sobic006G163300 Sobic007G147200--Sobic006G163300 Sobic001G143400 Sobic001G143400 Sobic007G147200--Sobic001G143400 Sobic007G147200--Sobic003G019900 Sobic006G107500 Sobic006G107500 Sobic007G147200--Sobic006G107500 Sobic007G147200--Sobic001G101700
Octagon: transcription factors


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