Gene annotation
Transcriptome id Sobic.003G011200.1
Synonym Sb03g001150
Functional annotation expressed protein
UniProt C5XKA3
Pfam -
Panther DB PTHR33929 PTHR33929:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G64080 : -
RAP-DB (Rice) LOC_Os01g12640.2 : expressed protein
MaizeGDB (Corn) Zm00025a022847 , Zm00025a035961
Brachypodium KQK03377
Barley HORVU3Hr1G030670.1 , HORVU3Hr1G030670.3 , HORVU3Hr1G030670.4
Wheat TraesCS3B02G177800 , TraesCS3A02G151000
Populus -


JBrowse

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cDNA sequences
Sobic.003G011200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G185300 AP2 domain containing protein, expressed -
2 Sobic.007G201900 expressed protein -
3 Sobic.002G279400 DUF630/DUF632 domains containing protein, putative, expressed -
4 Sobic.007G162400 ABC-2 type transporter domain containing protein, expressed -
5 Sobic.009G057800 kelch repeat-containing protein, putative, expressed -
6 Sobic.007G121200 YDG/SRA domain containing protein, expressed -
7 Sobic.002G112000 protein binding protein, putative, expressed -
8 Sobic.003G387300 ABC-2 type transporter domain containing protein, expressed -
9 Sobic.001G101700 OsGIF1(Ortholog in rice:He et al. (2017))(PubMedID : 31659832)@GRF-interacting factor 1, putative, expressed -
10 Sobic.007G137101 R2R3 MYB transcription factor(PubMedID : 33633216) K09422: transcription factor MYB, plant
11 Sobic.006G278000 protein kinase domain containing protein, expressed -
12 Sobic.010G255000 uncharacterized protein At4g06744 precursor, putative, expressed -
13 Sobic.001G158300 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
14 Sobic.002G027600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
15 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
16 Sobic.002G196500 linker histone H1 and H5 family protein, expressed -
17 Sobic.008G070700 leafbladeless1, putative, expressed -
18 Sobic.006G272800 Most C2 domain protein(PubMedID : 29491869)@anthranilate phosphoribosyltransferase, putative, expressed -
19 Sobic.008G022200 RNA-binding zinc finger protein, putative, expressed -
20 Sobic.003G250100 homeobox domain containing protein, expressed -


Gene co-expression network
sample Sobic003G011200 Sobic003G011200 Sobic010G185300 Sobic010G185300 Sobic003G011200--Sobic010G185300 Sobic007G201900 Sobic007G201900 Sobic003G011200--Sobic007G201900 Sobic002G279400 Sobic002G279400 Sobic003G011200--Sobic002G279400 Sobic007G162400 Sobic007G162400 Sobic003G011200--Sobic007G162400 Sobic009G057800 Sobic009G057800 Sobic003G011200--Sobic009G057800 Sobic007G121200 Sobic007G121200 Sobic003G011200--Sobic007G121200 Sobic002G112000 Sobic002G112000 Sobic003G011200--Sobic002G112000 Sobic003G387300 Sobic003G387300 Sobic003G011200--Sobic003G387300 Sobic001G101700 Sobic001G101700 Sobic003G011200--Sobic001G101700 Sobic004G343700 Sobic004G343700 Sobic010G185300--Sobic004G343700 Sobic010G185300--Sobic003G387300 Sobic002G027600 Sobic002G027600 Sobic010G185300--Sobic002G027600 Sobic010G185300--Sobic002G279400 Sobic010G185300--Sobic007G162400 Sobic004G234500 Sobic004G234500 Sobic010G185300--Sobic004G234500 Sobic010G185300--Sobic003G011200 Sobic005G062600 Sobic005G062600 Sobic010G185300--Sobic005G062600 Sobic007G147200 Sobic007G147200 Sobic010G185300--Sobic007G147200 Sobic007G201900--Sobic009G057800 Sobic007G201900--Sobic001G101700 Sobic010G255000 Sobic010G255000 Sobic007G201900--Sobic010G255000 Sobic007G201900--Sobic002G112000 Sobic007G201900--Sobic002G279400 Sobic001G101900 Sobic001G101900 Sobic007G201900--Sobic001G101900 Sobic003G244000 Sobic003G244000 Sobic007G201900--Sobic003G244000 Sobic009G143200 Sobic009G143200 Sobic007G201900--Sobic009G143200 Sobic007G201900--Sobic007G147200 Sobic002G279400--Sobic007G201900 Sobic002G279400--Sobic009G057800 Sobic009G127800 Sobic009G127800 Sobic002G279400--Sobic009G127800 Sobic006G221300 Sobic006G221300 Sobic002G279400--Sobic006G221300 Sobic005G153000 Sobic005G153000 Sobic002G279400--Sobic005G153000 Sobic002G279400--Sobic001G101700 Sobic009G188500 Sobic009G188500 Sobic002G279400--Sobic009G188500 Sobic001G054700 Sobic001G054700 Sobic002G279400--Sobic001G054700 Sobic009G208300 Sobic009G208300 Sobic002G279400--Sobic009G208300 Sobic007G162400--Sobic006G221300 Sobic007G162400--Sobic009G127800 Sobic007G162400--Sobic001G054700 Sobic004G108400 Sobic004G108400 Sobic007G162400--Sobic004G108400 Sobic007G162400--Sobic001G101700 Sobic007G162400--Sobic002G027600 Sobic007G162400--Sobic007G201900 Sobic003G290400 Sobic003G290400 Sobic007G162400--Sobic003G290400 Sobic007G162400--Sobic009G143200 Sobic009G057800--Sobic007G201900 Sobic009G057800--Sobic002G112000 Sobic009G057800--Sobic001G101700 Sobic009G057800--Sobic002G279400 Sobic008G151600 Sobic008G151600 Sobic009G057800--Sobic008G151600 Sobic007G209200 Sobic007G209200 Sobic009G057800--Sobic007G209200 Sobic009G057800--Sobic010G255000 Sobic009G057800--Sobic009G143200 Sobic003G282500 Sobic003G282500 Sobic009G057800--Sobic003G282500 Sobic003G092400 Sobic003G092400 Sobic007G121200--Sobic003G092400 Sobic001G456000 Sobic001G456000 Sobic007G121200--Sobic001G456000 Sobic003G046400 Sobic003G046400 Sobic007G121200--Sobic003G046400 Sobic010G183800 Sobic010G183800 Sobic007G121200--Sobic010G183800 Sobic001G071600 Sobic001G071600 Sobic007G121200--Sobic001G071600 Sobic002G078900 Sobic002G078900 Sobic007G121200--Sobic002G078900 Sobic010G220800 Sobic010G220800 Sobic007G121200--Sobic010G220800 Sobic002G344201 Sobic002G344201 Sobic007G121200--Sobic002G344201 Sobic007G137101 Sobic007G137101 Sobic007G121200--Sobic007G137101 Sobic002G112000--Sobic009G057800 Sobic002G112000--Sobic007G201900 Sobic002G317700 Sobic002G317700 Sobic002G112000--Sobic002G317700 Sobic008G070700 Sobic008G070700 Sobic002G112000--Sobic008G070700 Sobic010G222800 Sobic010G222800 Sobic002G112000--Sobic010G222800 Sobic003G129500 Sobic003G129500 Sobic002G112000--Sobic003G129500 Sobic006G272800 Sobic006G272800 Sobic002G112000--Sobic006G272800 Sobic004G190500 Sobic004G190500 Sobic002G112000--Sobic004G190500 Sobic009G002200 Sobic009G002200 Sobic002G112000--Sobic009G002200 Sobic003G387300--Sobic010G185300 Sobic003G387300--Sobic002G279400 Sobic003G387300--Sobic007G162400 Sobic003G387300--Sobic002G027600 Sobic001G030100 Sobic001G030100 Sobic003G387300--Sobic001G030100 Sobic003G387300--Sobic004G108400 Sobic003G387300--Sobic007G201900 Sobic004G266800 Sobic004G266800 Sobic003G387300--Sobic004G266800 Sobic003G387300--Sobic010G255000 Sobic006G221800 Sobic006G221800 Sobic001G101700--Sobic006G221800 Sobic001G101700--Sobic010G255000 Sobic004G003700 Sobic004G003700 Sobic001G101700--Sobic004G003700 Sobic001G101700--Sobic007G147200 Sobic001G101700--Sobic007G201900 Sobic001G101700--Sobic007G209200 Sobic001G101700--Sobic008G151600 Sobic001G101700--Sobic009G057800 Sobic001G143400 Sobic001G143400 Sobic001G101700--Sobic001G143400
Octagon: transcription factors


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