Gene annotation
| Transcriptome id | Sobic.004G343700.1,Sobic.004G343700.2,Sobic.004G343700.5,Sobic.004G343700.4,Sobic.004G343700.6,Sobic.004G343700.3 |
|---|---|
| Synonym | Sb04g037090, ALE2 |
| Functional annotation | serine/threonine-protein kinase, putative, expressed |
| UniProt | A0A194YSX9 , A0A194YSY1 , A0A1Z5RQB4 , A0A1Z5RQU4 , A0A1Z5RQA6 , A0A1Z5RQS3 |
| Pfam | PF07714 |
| Panther DB | PTHR27001 PTHR27001:SF10 |
| NCBI CDD | KOG1187; Serine/threonine protein kinase |
| KEGG Orthology | - |
| Gene Ontology | GO:0006468; protein phosphorylation GO:0004672protein kinase activity |
Orthologs (automatic annotation)
| TAIR | AT2G20300 : Protein kinase superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os02g57080.1 : serine/threonine-protein kinase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a022595 , Zm00025a032814 |
| Brachypodium | KQK01336 , KQK01337 , PNT69429 , PNT69428 |
| Barley | HORVU6Hr1G090290.12 , HORVU6Hr1G090290.13 , HORVU6Hr1G090290.10 , HORVU6Hr1G090290.11 , HORVU6Hr1G090290.9 , HORVU6Hr1G090290.4 , HORVU6Hr1G090290.1 , HORVU6Hr1G090290.3 , HORVU6Hr1G090290.8 , HORVU6Hr1G090290.5 , HORVU6Hr1G090290.6 , HORVU6Hr1G090290.7 , HORVU6Hr1G090290.2 |
| Wheat | TraesCS6A02G386800 , TraesCS6A02G386800 , TraesCS6B02G425900 , TraesCS6B02G425900 , TraesCS6D02G371500 , TraesCS6D02G371500 |
| Populus | PNT51670 , PNT51668 |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G373900 | universal stress protein domain containing protein, putative, expressed | - |
| 2 | Sobic.004G246500 | ATMAP70 protein, putative, expressed | - |
| 3 | Sobic.003G019900 | GDSL-like lipase/acylhydrolase, putative, expressed | - |
| 4 | Sobic.001G271600 | transferase family protein, putative, expressed | - |
| 5 | Sobic.010G185300 | AP2 domain containing protein, expressed | - |
| 6 | Sobic.010G269700 | expressed protein | - |
| 7 | Sobic.004G234500 | eukaryotic aspartyl protease domain containing protein, expressed | - |
| 8 | Sobic.006G274200 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Eukaryotic aspartyl protease domain containing protein, expressed | - |
| 9 | Sobic.007G147200 | OsSub56 - Putative Subtilisin homologue, expressed | - |
| 10 | Sobic.010G092400 | glycosyl transferase 8 domain containing protein, putative, expressed | - |
| 11 | Sobic.005G020100 | CDC45B - Putative DNA replication initiation protein, expressed | K06628: cell division control protein 45 |
| 12 | Sobic.001G074000 | receptor protein kinase CLAVATA1 precursor, putative, expressed | - |
| 13 | Sobic.003G085900 | Glycosyl hydrolase. predicted target of sbi-miR-5568 and sbi-miR-6220 expressed in the stems of sweet sorghum(PubMedID : 26117170)@glycosyl hydrolase, family 31, putative, expressed | K15925: alpha-D-xyloside xylohydrolase |
| 14 | Sobic.007G000500 | HMG1/2, putative, expressed | - |
| 15 | Sobic.010G077000 | "Upregulated in leave and stem in response to drouht stress, not expredded in roots"(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed | - |
| 16 | Sobic.006G107500 | MYB family transcription factor, putative, expressed | K09422: transcription factor MYB, plant |
| 17 | Sobic.006G093200 | PHD finger protein, putative, expressed | - |
| 18 | Sobic.001G493900 | beta-galactosidase, putative, expressed | - |
| 19 | Sobic.010G129700 | microtubule associated protein, putative, expressed | K16732: protein regulator of cytokinesis 1 |
| 20 | Sobic.005G062600 | MLO domain containing protein, putative, expressed | K08472: mlo protein |
Gene co-expression network
Octagon: transcription factors
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