Gene annotation
Transcriptome id Sobic.005G157300.1
Synonym Sb05g021980
Functional annotation protein binding protein, putative, expressed
UniProt C5Y4T2
Pfam PF10497
Panther DB PTHR31169 PTHR31169:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G37110 : Zinc-finger domain of monoamine-oxidase A repressor R1
RAP-DB (Rice) LOC_Os11g36030.1 : protein binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a033831 , Zm00025a015773
Brachypodium KQJ88175
Barley HORVU3Hr1G022620.4 , HORVU3Hr1G022620.1 , HORVU3Hr1G022620.3 , HORVU3Hr1G022620.2
Wheat TraesCS3D02G123900 , TraesCS3D02G123800 , TraesCS3D02G123800 , TraesCS3A02G121700 , TraesCS3B02G141100
Populus -


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cDNA sequences
Sobic.005G157300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G143200 DUF630/DUF632 domains containing protein, putative, expressed -
2 Sobic.003G055600 expressed protein -
3 Sobic.003G183700 MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed K02212: MCM4, DNA replication licensing factor MCM4
4 Sobic.001G377700 expressed protein K10895: fanconi anemia group I protein
5 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
6 Sobic.006G221300 expressed protein -
7 Sobic.007G187700 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
8 Sobic.009G172950 - K02541: DNA replication licensing factor MCM3
9 Sobic.009G127800 BZIP protein, putative, expressed -
10 Sobic.002G021200 expressed protein K19001: HELLS, ATP-dependent DNA helicase
11 Sobic.003G292700 kinesin motor protein-related, putative, expressed K10406: kinesin family member C2/C3
12 Sobic.006G051000 POLA3 - Putative DNA polymerase alpha complex subunit, expressed K02685: DNA primase large subunit
13 Sobic.006G196600 expressed protein -
14 Sobic.009G225500 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
15 Sobic.010G086000 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
16 Sobic.003G032200 IQ calmodulin-binding motif domain containing protein, expressed -
17 Sobic.006G142500 protein kinase, putative, expressed -
18 Sobic.004G108400 heavy-metal-associated domain-containing protein, putative, expressed -
19 Sobic.004G317000 growth regulating factor protein, putative, expressed -
20 Sobic.007G188001 - K11844: ubiquitin carboxyl-terminal hydrolase 16/45


Gene co-expression network
sample Sobic005G157300 Sobic005G157300 Sobic009G143200 Sobic009G143200 Sobic005G157300--Sobic009G143200 Sobic003G055600 Sobic003G055600 Sobic005G157300--Sobic003G055600 Sobic003G183700 Sobic003G183700 Sobic005G157300--Sobic003G183700 Sobic001G377700 Sobic001G377700 Sobic005G157300--Sobic001G377700 Sobic001G054700 Sobic001G054700 Sobic005G157300--Sobic001G054700 Sobic006G221300 Sobic006G221300 Sobic005G157300--Sobic006G221300 Sobic007G187700 Sobic007G187700 Sobic005G157300--Sobic007G187700 Sobic009G172950 Sobic009G172950 Sobic005G157300--Sobic009G172950 Sobic009G127800 Sobic009G127800 Sobic005G157300--Sobic009G127800 Sobic009G143200--Sobic005G157300 Sobic004G317000 Sobic004G317000 Sobic009G143200--Sobic004G317000 Sobic009G143200--Sobic001G054700 Sobic009G143200--Sobic003G055600 Sobic009G143200--Sobic006G221300 Sobic009G077300 Sobic009G077300 Sobic009G143200--Sobic009G077300 Sobic004G108400 Sobic004G108400 Sobic009G143200--Sobic004G108400 Sobic004G052200 Sobic004G052200 Sobic009G143200--Sobic004G052200 Sobic009G143200--Sobic007G187700 Sobic003G055600--Sobic001G377700 Sobic003G055600--Sobic005G157300 Sobic003G055600--Sobic009G143200 Sobic003G055600--Sobic003G183700 Sobic004G321400 Sobic004G321400 Sobic003G055600--Sobic004G321400 Sobic003G055600--Sobic009G172950 Sobic002G021200 Sobic002G021200 Sobic003G055600--Sobic002G021200 Sobic005G110535 Sobic005G110535 Sobic003G055600--Sobic005G110535 Sobic007G007800 Sobic007G007800 Sobic003G055600--Sobic007G007800 Sobic006G051000 Sobic006G051000 Sobic003G183700--Sobic006G051000 Sobic009G087000 Sobic009G087000 Sobic003G183700--Sobic009G087000 Sobic006G195500 Sobic006G195500 Sobic003G183700--Sobic006G195500 Sobic010G103700 Sobic010G103700 Sobic003G183700--Sobic010G103700 Sobic003G179500 Sobic003G179500 Sobic003G183700--Sobic003G179500 Sobic003G183700--Sobic005G110535 Sobic008G129200 Sobic008G129200 Sobic003G183700--Sobic008G129200 Sobic003G183700--Sobic004G321400 Sobic010G147700 Sobic010G147700 Sobic003G183700--Sobic010G147700 Sobic002G290000 Sobic002G290000 Sobic001G377700--Sobic002G290000 Sobic001G377700--Sobic002G021200 Sobic001G377700--Sobic003G183700 Sobic001G377700--Sobic005G110535 Sobic001G377700--Sobic003G055600 Sobic001G377700--Sobic006G195500 Sobic001G377700--Sobic007G187700 Sobic007G125300 Sobic007G125300 Sobic001G377700--Sobic007G125300 Sobic001G377700--Sobic005G157300 Sobic001G054700--Sobic006G221300 Sobic001G054700--Sobic009G077300 Sobic001G054700--Sobic004G108400 Sobic001G054700--Sobic009G143200 Sobic002G050700 Sobic002G050700 Sobic001G054700--Sobic002G050700 Sobic006G124400 Sobic006G124400 Sobic001G054700--Sobic006G124400 Sobic001G054700--Sobic009G127800 Sobic005G153000 Sobic005G153000 Sobic001G054700--Sobic005G153000 Sobic006G221800 Sobic006G221800 Sobic001G054700--Sobic006G221800 Sobic006G221300--Sobic009G127800 Sobic006G221300--Sobic001G054700 Sobic006G221300--Sobic009G077300 Sobic006G221300--Sobic005G153000 Sobic006G221300--Sobic009G143200 Sobic006G221300--Sobic004G108400 Sobic006G221300--Sobic004G052200 Sobic009G225500 Sobic009G225500 Sobic006G221300--Sobic009G225500 Sobic008G052300 Sobic008G052300 Sobic006G221300--Sobic008G052300 Sobic002G168000 Sobic002G168000 Sobic007G187700--Sobic002G168000 Sobic007G187700--Sobic002G021200 Sobic007G187700--Sobic005G153000 Sobic001G104500 Sobic001G104500 Sobic007G187700--Sobic001G104500 Sobic007G187700--Sobic001G377700 Sobic006G275500 Sobic006G275500 Sobic007G187700--Sobic006G275500 Sobic007G187700--Sobic004G317000 Sobic004G282601 Sobic004G282601 Sobic007G187700--Sobic004G282601 Sobic007G187700--Sobic009G077300 Sobic009G172950--Sobic003G183700 Sobic009G172950--Sobic009G087000 Sobic003G032200 Sobic003G032200 Sobic009G172950--Sobic003G032200 Sobic003G444300 Sobic003G444300 Sobic009G172950--Sobic003G444300 Sobic001G083300 Sobic001G083300 Sobic009G172950--Sobic001G083300 Sobic009G184200 Sobic009G184200 Sobic009G172950--Sobic009G184200 Sobic009G172950--Sobic004G321400 Sobic001G105800 Sobic001G105800 Sobic009G172950--Sobic001G105800 Sobic001G146900 Sobic001G146900 Sobic009G172950--Sobic001G146900 Sobic009G127800--Sobic006G221300 Sobic009G127800--Sobic009G225500 Sobic009G127800--Sobic001G054700 Sobic006G142500 Sobic006G142500 Sobic009G127800--Sobic006G142500 Sobic009G127800--Sobic008G052300 Sobic002G279400 Sobic002G279400 Sobic009G127800--Sobic002G279400 Sobic007G162400 Sobic007G162400 Sobic009G127800--Sobic007G162400 Sobic002G027600 Sobic002G027600 Sobic009G127800--Sobic002G027600 Sobic009G127800--Sobic005G157300
Octagon: transcription factors


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