Gene annotation
Transcriptome id Sobic.003G055600.1
Synonym Sb03g004760, ETG1
Functional annotation expressed protein
UniProt C5XNI6
Pfam PF09739
Panther DB PTHR13489:SF0 PTHR13489
NCBI CDD KOG2545; Conserved membrane protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G40550 : E2F target gene 1
RAP-DB (Rice) LOC_Os01g07260.1 : expressed protein
MaizeGDB (Corn) Zm00025a019000 , Zm00025a023313
Brachypodium KQK02854 , KQK02853
Barley HORVU3Hr1G017570.8 , HORVU3Hr1G017570.5 , HORVU3Hr1G017570.4 , HORVU3Hr1G017570.7 , HORVU3Hr1G017570.6 , HORVU3Hr1G017570.1 , HORVU3Hr1G017570.3 , HORVU3Hr1G017570.2 , HORVU3Hr1G017570.9 , HORVU3Hr1G017570.11 , HORVU3Hr1G017570.10 , HORVU3Hr1G017570.13 , HORVU3Hr1G017570.12 , HORVU3Hr1G017570.15 , HORVU3Hr1G017570.14 , HORVU3Hr1G017570.17 , HORVU3Hr1G017570.16
Wheat TraesCS3A02G097200 , TraesCS3D02G097700 , TraesCS3B02G112900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G377700 expressed protein K10895: fanconi anemia group I protein
2 Sobic.005G157300 protein binding protein, putative, expressed -
3 Sobic.009G143200 DUF630/DUF632 domains containing protein, putative, expressed -
4 Sobic.003G183700 MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed K02212: MCM4, DNA replication licensing factor MCM4
5 Sobic.004G321400 BRUSHY 1, putative, expressed -
6 Sobic.009G172950 - K02541: DNA replication licensing factor MCM3
7 Sobic.002G021200 expressed protein K19001: HELLS, ATP-dependent DNA helicase
8 Sobic.005G110535 - K02540: DNA replication licensing factor MCM2
9 Sobic.007G007800 DNA repair metallo-beta-lactamase, putative, expressed K15340: DCLRE1A, SNM1A, DNA cross-link repair 1A protein
10 Sobic.002G190000 ZOS9-05 - C2H2 zinc finger protein, expressed -
11 Sobic.009G184200 RecF/RecN/SMC N terminal domain containing protein, expressed K06675: structural maintenance of chromosome 4
12 Sobic.004G331600 MCM5 - Putative minichromosome maintenance MCM complex subunit 5, expressed K02209: MCM5, DNA replication licensing factor MCM5
13 Sobic.003G292700 kinesin motor protein-related, putative, expressed K10406: kinesin family member C2/C3
14 Sobic.006G051000 POLA3 - Putative DNA polymerase alpha complex subunit, expressed K02685: DNA primase large subunit
15 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
16 Sobic.001G238900 OsFBX386 - F-box domain containing protein, expressed -
17 Sobic.003G032200 IQ calmodulin-binding motif domain containing protein, expressed -
18 Sobic.002G223900 OsFBX330 - F-box domain containing protein, expressed -
19 Sobic.003G393100 chromosome segregation protein, putative, expressed K06674: structural maintenance of chromosome 2
20 Sobic.003G369200 POLA1 - Putative DNA polymerase alpha catalytic subunit, expressed K02320: DNA polymerase alpha subunit A


Gene co-expression network
sample Sobic003G055600 Sobic003G055600 Sobic001G377700 Sobic001G377700 Sobic003G055600--Sobic001G377700 Sobic005G157300 Sobic005G157300 Sobic003G055600--Sobic005G157300 Sobic009G143200 Sobic009G143200 Sobic003G055600--Sobic009G143200 Sobic003G183700 Sobic003G183700 Sobic003G055600--Sobic003G183700 Sobic004G321400 Sobic004G321400 Sobic003G055600--Sobic004G321400 Sobic009G172950 Sobic009G172950 Sobic003G055600--Sobic009G172950 Sobic002G021200 Sobic002G021200 Sobic003G055600--Sobic002G021200 Sobic005G110535 Sobic005G110535 Sobic003G055600--Sobic005G110535 Sobic007G007800 Sobic007G007800 Sobic003G055600--Sobic007G007800 Sobic002G290000 Sobic002G290000 Sobic001G377700--Sobic002G290000 Sobic001G377700--Sobic002G021200 Sobic001G377700--Sobic003G183700 Sobic001G377700--Sobic005G110535 Sobic001G377700--Sobic003G055600 Sobic006G195500 Sobic006G195500 Sobic001G377700--Sobic006G195500 Sobic007G187700 Sobic007G187700 Sobic001G377700--Sobic007G187700 Sobic007G125300 Sobic007G125300 Sobic001G377700--Sobic007G125300 Sobic001G377700--Sobic005G157300 Sobic005G157300--Sobic009G143200 Sobic005G157300--Sobic003G055600 Sobic005G157300--Sobic003G183700 Sobic005G157300--Sobic001G377700 Sobic001G054700 Sobic001G054700 Sobic005G157300--Sobic001G054700 Sobic006G221300 Sobic006G221300 Sobic005G157300--Sobic006G221300 Sobic005G157300--Sobic007G187700 Sobic005G157300--Sobic009G172950 Sobic009G127800 Sobic009G127800 Sobic005G157300--Sobic009G127800 Sobic009G143200--Sobic005G157300 Sobic004G317000 Sobic004G317000 Sobic009G143200--Sobic004G317000 Sobic009G143200--Sobic001G054700 Sobic009G143200--Sobic003G055600 Sobic009G143200--Sobic006G221300 Sobic009G077300 Sobic009G077300 Sobic009G143200--Sobic009G077300 Sobic004G108400 Sobic004G108400 Sobic009G143200--Sobic004G108400 Sobic004G052200 Sobic004G052200 Sobic009G143200--Sobic004G052200 Sobic009G143200--Sobic007G187700 Sobic006G051000 Sobic006G051000 Sobic003G183700--Sobic006G051000 Sobic009G087000 Sobic009G087000 Sobic003G183700--Sobic009G087000 Sobic003G183700--Sobic006G195500 Sobic010G103700 Sobic010G103700 Sobic003G183700--Sobic010G103700 Sobic003G179500 Sobic003G179500 Sobic003G183700--Sobic003G179500 Sobic003G183700--Sobic005G110535 Sobic008G129200 Sobic008G129200 Sobic003G183700--Sobic008G129200 Sobic003G183700--Sobic004G321400 Sobic010G147700 Sobic010G147700 Sobic003G183700--Sobic010G147700 Sobic004G321400--Sobic003G183700 Sobic004G321400--Sobic009G087000 Sobic004G321400--Sobic005G110535 Sobic004G321400--Sobic002G290000 Sobic003G369200 Sobic003G369200 Sobic004G321400--Sobic003G369200 Sobic004G321400--Sobic008G129200 Sobic004G095200 Sobic004G095200 Sobic004G321400--Sobic004G095200 Sobic004G321400--Sobic009G172950 Sobic004G331600 Sobic004G331600 Sobic004G321400--Sobic004G331600 Sobic009G172950--Sobic003G183700 Sobic009G172950--Sobic009G087000 Sobic003G032200 Sobic003G032200 Sobic009G172950--Sobic003G032200 Sobic003G444300 Sobic003G444300 Sobic009G172950--Sobic003G444300 Sobic001G083300 Sobic001G083300 Sobic009G172950--Sobic001G083300 Sobic009G184200 Sobic009G184200 Sobic009G172950--Sobic009G184200 Sobic009G172950--Sobic004G321400 Sobic001G105800 Sobic001G105800 Sobic009G172950--Sobic001G105800 Sobic001G146900 Sobic001G146900 Sobic009G172950--Sobic001G146900 Sobic002G021200--Sobic007G187700 Sobic002G021200--Sobic001G377700 Sobic002G168000 Sobic002G168000 Sobic002G021200--Sobic002G168000 Sobic006G281900 Sobic006G281900 Sobic002G021200--Sobic006G281900 Sobic002G021200--Sobic001G054700 Sobic003G292700 Sobic003G292700 Sobic002G021200--Sobic003G292700 Sobic002G021200--Sobic003G055600 Sobic002G021200--Sobic005G157300 Sobic002G021200--Sobic009G077300 Sobic005G110535--Sobic002G290000 Sobic005G110535--Sobic009G087000 Sobic005G110535--Sobic010G147700 Sobic005G110535--Sobic008G129200 Sobic005G110535--Sobic003G183700 Sobic005G110535--Sobic003G369200 Sobic005G110535--Sobic004G321400 Sobic005G110535--Sobic003G179500 Sobic005G110535--Sobic001G377700 Sobic002G272300 Sobic002G272300 Sobic007G007800--Sobic002G272300 Sobic007G007800--Sobic001G105800 Sobic007G007800--Sobic009G184200 Sobic001G013400 Sobic001G013400 Sobic007G007800--Sobic001G013400 Sobic002G223900 Sobic002G223900 Sobic007G007800--Sobic002G223900 Sobic007G007800--Sobic004G331600 Sobic005G020100 Sobic005G020100 Sobic007G007800--Sobic005G020100 Sobic010G092400 Sobic010G092400 Sobic007G007800--Sobic010G092400 Sobic007G007800--Sobic001G083300
Octagon: transcription factors


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