Gene annotation
Transcriptome id Sobic.007G007800.1
Synonym Sb07g000830
Functional annotation DNA repair metallo-beta-lactamase, putative, expressed
UniProt C5YLJ7
Pfam PF12706 PF07522
Panther DB PTHR23240 PTHR23240:SF11
NCBI CDD KOG1361; Predicted hydrolase involved in interstrand cross-link repair
KEGG Orthology K15340; DCLRE1A, SNM1A, DNA cross-link repair 1A protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G19025 : DNA repair metallo-beta-lactamase family protein
RAP-DB (Rice) LOC_Os08g01630.1 : DNA repair metallo-beta-lactamase, putative, expressed
MaizeGDB (Corn) Zm00025a030309
Brachypodium KQK13432 , PNT74208 , PNT74207
Barley HORVU7Hr1G077400.9 , HORVU7Hr1G077400.8 , HORVU7Hr1G077400.7 , HORVU7Hr1G077400.6 , HORVU7Hr1G077400.5 , HORVU7Hr1G077400.4 , HORVU7Hr1G077400.3 , HORVU7Hr1G077400.2 , HORVU7Hr1G077400.1
Wheat TraesCS7B02G224400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G272300 expressed protein -
2 Sobic.001G105800 OsFBX109 - F-box domain containing protein, expressed -
3 Sobic.009G184200 RecF/RecN/SMC N terminal domain containing protein, expressed K06675: structural maintenance of chromosome 4
4 Sobic.001G013400 nuf2 family protein, expressed -
5 Sobic.002G223900 OsFBX330 - F-box domain containing protein, expressed -
6 Sobic.004G331600 MCM5 - Putative minichromosome maintenance MCM complex subunit 5, expressed K02209: MCM5, DNA replication licensing factor MCM5
7 Sobic.005G020100 CDC45B - Putative DNA replication initiation protein, expressed K06628: cell division control protein 45
8 Sobic.010G092400 glycosyl transferase 8 domain containing protein, putative, expressed -
9 Sobic.001G083300 transducin family protein, putative, expressed K02180: cell cycle arrest protein BUB3
10 Sobic.008G129200 MCM7 - Putative minichromosome maintenance MCM complex subunit 7, expressed K02210: MCM7, DNA replication licensing factor MCM7
11 Sobic.001G456500 RPA1B - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
12 Sobic.005G110535 - K02540: DNA replication licensing factor MCM2
13 Sobic.003G387700 expressed protein -
14 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
15 Sobic.007G121650 - -
16 Sobic.003G055600 expressed protein -
17 Sobic.001G142000 deoxyuridine 5-triphosphate nucleotidohydrolase, putative, expressed K01520: dut, dUTP pyrophosphatase
18 Sobic.003G393100 chromosome segregation protein, putative, expressed K06674: structural maintenance of chromosome 2
19 Sobic.004G075900 CSLA1 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
20 Sobic.003G032200 IQ calmodulin-binding motif domain containing protein, expressed -


Gene co-expression network
sample Sobic007G007800 Sobic007G007800 Sobic002G272300 Sobic002G272300 Sobic007G007800--Sobic002G272300 Sobic001G105800 Sobic001G105800 Sobic007G007800--Sobic001G105800 Sobic009G184200 Sobic009G184200 Sobic007G007800--Sobic009G184200 Sobic001G013400 Sobic001G013400 Sobic007G007800--Sobic001G013400 Sobic002G223900 Sobic002G223900 Sobic007G007800--Sobic002G223900 Sobic004G331600 Sobic004G331600 Sobic007G007800--Sobic004G331600 Sobic005G020100 Sobic005G020100 Sobic007G007800--Sobic005G020100 Sobic010G092400 Sobic010G092400 Sobic007G007800--Sobic010G092400 Sobic001G083300 Sobic001G083300 Sobic007G007800--Sobic001G083300 Sobic002G272300--Sobic007G007800 Sobic002G272300--Sobic009G184200 Sobic010G147700 Sobic010G147700 Sobic002G272300--Sobic010G147700 Sobic003G032200 Sobic003G032200 Sobic002G272300--Sobic003G032200 Sobic009G087000 Sobic009G087000 Sobic002G272300--Sobic009G087000 Sobic002G272300--Sobic001G083300 Sobic002G272300--Sobic004G331600 Sobic008G129200 Sobic008G129200 Sobic002G272300--Sobic008G129200 Sobic001G456500 Sobic001G456500 Sobic002G272300--Sobic001G456500 Sobic001G105800--Sobic007G007800 Sobic001G105800--Sobic002G223900 Sobic001G105800--Sobic009G184200 Sobic003G444300 Sobic003G444300 Sobic001G105800--Sobic003G444300 Sobic003G387700 Sobic003G387700 Sobic001G105800--Sobic003G387700 Sobic001G105800--Sobic001G083300 Sobic001G105800--Sobic001G456500 Sobic010G105400 Sobic010G105400 Sobic001G105800--Sobic010G105400 Sobic009G172950 Sobic009G172950 Sobic001G105800--Sobic009G172950 Sobic002G204400 Sobic002G204400 Sobic009G184200--Sobic002G204400 Sobic009G184200--Sobic010G105400 Sobic001G398400 Sobic001G398400 Sobic009G184200--Sobic001G398400 Sobic003G393100 Sobic003G393100 Sobic009G184200--Sobic003G393100 Sobic010G129700 Sobic010G129700 Sobic009G184200--Sobic010G129700 Sobic009G184200--Sobic003G032200 Sobic001G170800 Sobic001G170800 Sobic009G184200--Sobic001G170800 Sobic009G184200--Sobic007G007800 Sobic003G260700 Sobic003G260700 Sobic009G184200--Sobic003G260700 Sobic001G025900 Sobic001G025900 Sobic001G013400--Sobic001G025900 Sobic001G013400--Sobic007G007800 Sobic002G290000 Sobic002G290000 Sobic001G013400--Sobic002G290000 Sobic002G113400 Sobic002G113400 Sobic001G013400--Sobic002G113400 Sobic001G013400--Sobic008G129200 Sobic001G142000 Sobic001G142000 Sobic001G013400--Sobic001G142000 Sobic005G110535 Sobic005G110535 Sobic001G013400--Sobic005G110535 Sobic001G013400--Sobic001G083300 Sobic001G013400--Sobic004G331600 Sobic002G223900--Sobic001G456500 Sobic002G223900--Sobic001G083300 Sobic002G223900--Sobic001G105800 Sobic002G223900--Sobic004G331600 Sobic002G223900--Sobic007G007800 Sobic002G223900--Sobic008G129200 Sobic006G116500 Sobic006G116500 Sobic002G223900--Sobic006G116500 Sobic003G183700 Sobic003G183700 Sobic002G223900--Sobic003G183700 Sobic002G223900--Sobic003G387700 Sobic004G331600--Sobic001G456500 Sobic004G331600--Sobic008G129200 Sobic010G054600 Sobic010G054600 Sobic004G331600--Sobic010G054600 Sobic004G331600--Sobic009G087000 Sobic004G331600--Sobic001G142000 Sobic004G331600--Sobic002G223900 Sobic004G331600--Sobic003G183700 Sobic004G331600--Sobic010G147700 Sobic004G331600--Sobic007G007800 Sobic005G020100--Sobic007G007800 Sobic001G271600 Sobic001G271600 Sobic005G020100--Sobic001G271600 Sobic007G000500 Sobic007G000500 Sobic005G020100--Sobic007G000500 Sobic003G085900 Sobic003G085900 Sobic005G020100--Sobic003G085900 Sobic010G204700 Sobic010G204700 Sobic005G020100--Sobic010G204700 Sobic003G374100 Sobic003G374100 Sobic005G020100--Sobic003G374100 Sobic010G269700 Sobic010G269700 Sobic005G020100--Sobic010G269700 Sobic005G020100--Sobic002G272300 Sobic006G228000 Sobic006G228000 Sobic005G020100--Sobic006G228000 Sobic007G116800 Sobic007G116800 Sobic010G092400--Sobic007G116800 Sobic005G062600 Sobic005G062600 Sobic010G092400--Sobic005G062600 Sobic010G092400--Sobic003G085900 Sobic010G092400--Sobic007G007800 Sobic010G092400--Sobic009G184200 Sobic010G092400--Sobic010G269700 Sobic007G087800 Sobic007G087800 Sobic010G092400--Sobic007G087800 Sobic010G092400--Sobic003G387700 Sobic008G070700 Sobic008G070700 Sobic010G092400--Sobic008G070700 Sobic001G083300--Sobic001G456500 Sobic001G083300--Sobic002G223900 Sobic001G083300--Sobic003G444300 Sobic001G083300--Sobic010G147700 Sobic001G083300--Sobic009G087000 Sobic001G083300--Sobic003G183700 Sobic001G083300--Sobic008G129200 Sobic001G083300--Sobic001G105800 Sobic001G083300--Sobic004G331600
Octagon: transcription factors


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