Gene annotation
Transcriptome id Sobic.004G075900.1,Sobic.004G075900.2
Synonym CSLA02, CSLA2, Sb04g006260, ATCSLA02, ATCSLA2
Functional annotation CSLA1 - cellulose synthase-like family A
mannan synthase, expressed
UniProt C5XXD6 , A0A1Z5RLD0
Pfam PF13641 PF13632
Panther DB PTHR32044:SF24 PTHR32044 PTHR32044 PTHR32044:SF24
NCBI CDD -
KEGG Orthology K13680; beta-mannan synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G22740 : cellulose synthase-like A02
RAP-DB (Rice) LOC_Os02g09930.1 : CSLA1 - cellulose synthase-like family A; mannan synthase, expressed
MaizeGDB (Corn) Zm00025a034690 , Zm00025a051489
Brachypodium KQJ93791
Barley HORVU6Hr1G034630.8 , HORVU6Hr1G034630.9 , HORVU6Hr1G034630.4 , HORVU6Hr1G034630.5 , HORVU6Hr1G034630.6 , HORVU6Hr1G034630.7 , HORVU6Hr1G034630.1 , HORVU6Hr1G034630.2 , HORVU6Hr1G034630.3 , HORVU4Hr1G037380.3 , HORVU4Hr1G037380.2 , HORVU6Hr1G034630.12 , HORVU6Hr1G034630.13 , HORVU6Hr1G034630.10 , HORVU6Hr1G034630.11 , HORVU4Hr1G037380.1
Wheat TraesCS6D02G158600 , TraesCS6A02G169200 , TraesCS6B02G197200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G142000 deoxyuridine 5-triphosphate nucleotidohydrolase, putative, expressed K01520: dut, dUTP pyrophosphatase
2 Sobic.001G105800 OsFBX109 - F-box domain containing protein, expressed -
3 Sobic.007G007800 DNA repair metallo-beta-lactamase, putative, expressed K15340: DCLRE1A, SNM1A, DNA cross-link repair 1A protein
4 Sobic.001G013400 nuf2 family protein, expressed -
5 Sobic.004G331600 MCM5 - Putative minichromosome maintenance MCM complex subunit 5, expressed K02209: MCM5, DNA replication licensing factor MCM5
6 Sobic.007G100600 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.003G444300 expressed protein K11550: SPBC25, kinetochore protein Spc25, animal type
8 Sobic.001G456500 RPA1B - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
9 Sobic.003G387700 expressed protein -
10 Sobic.009G184200 RecF/RecN/SMC N terminal domain containing protein, expressed K06675: structural maintenance of chromosome 4
11 Sobic.002G223900 OsFBX330 - F-box domain containing protein, expressed -
12 Sobic.010G092400 glycosyl transferase 8 domain containing protein, putative, expressed -
13 Sobic.005G020100 CDC45B - Putative DNA replication initiation protein, expressed K06628: cell division control protein 45
14 Sobic.010G054600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribonucleoside-diphosphate reductase large subunit, putative, expressed K10807: ribonucleoside-diphosphate reductase subunit M1
15 Sobic.003G085900 Glycosyl hydrolase. predicted target of sbi-miR-5568 and sbi-miR-6220 expressed in the stems of sweet sorghum(PubMedID : 26117170)@glycosyl hydrolase, family 31, putative, expressed K15925: alpha-D-xyloside xylohydrolase
16 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
17 Sobic.008G129200 MCM7 - Putative minichromosome maintenance MCM complex subunit 7, expressed K02210: MCM7, DNA replication licensing factor MCM7
18 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
19 Sobic.002G128000 receptor protein kinase, putative, expressed -
20 Sobic.004G327600 expressed protein -


Gene co-expression network
sample Sobic004G075900 Sobic004G075900 Sobic001G142000 Sobic001G142000 Sobic004G075900--Sobic001G142000 Sobic001G105800 Sobic001G105800 Sobic004G075900--Sobic001G105800 Sobic007G007800 Sobic007G007800 Sobic004G075900--Sobic007G007800 Sobic001G013400 Sobic001G013400 Sobic004G075900--Sobic001G013400 Sobic004G331600 Sobic004G331600 Sobic004G075900--Sobic004G331600 Sobic007G100600 Sobic007G100600 Sobic004G075900--Sobic007G100600 Sobic003G444300 Sobic003G444300 Sobic004G075900--Sobic003G444300 Sobic001G456500 Sobic001G456500 Sobic004G075900--Sobic001G456500 Sobic003G387700 Sobic003G387700 Sobic004G075900--Sobic003G387700 Sobic001G142000--Sobic001G456500 Sobic010G054600 Sobic010G054600 Sobic001G142000--Sobic010G054600 Sobic001G142000--Sobic004G331600 Sobic001G142000--Sobic003G444300 Sobic008G129200 Sobic008G129200 Sobic001G142000--Sobic008G129200 Sobic001G083300 Sobic001G083300 Sobic001G142000--Sobic001G083300 Sobic006G116500 Sobic006G116500 Sobic001G142000--Sobic006G116500 Sobic001G142000--Sobic001G013400 Sobic001G142000--Sobic004G075900 Sobic001G105800--Sobic007G007800 Sobic002G223900 Sobic002G223900 Sobic001G105800--Sobic002G223900 Sobic009G184200 Sobic009G184200 Sobic001G105800--Sobic009G184200 Sobic001G105800--Sobic003G444300 Sobic001G105800--Sobic003G387700 Sobic001G105800--Sobic001G083300 Sobic001G105800--Sobic001G456500 Sobic010G105400 Sobic010G105400 Sobic001G105800--Sobic010G105400 Sobic009G172950 Sobic009G172950 Sobic001G105800--Sobic009G172950 Sobic002G272300 Sobic002G272300 Sobic007G007800--Sobic002G272300 Sobic007G007800--Sobic001G105800 Sobic007G007800--Sobic009G184200 Sobic007G007800--Sobic001G013400 Sobic007G007800--Sobic002G223900 Sobic007G007800--Sobic004G331600 Sobic005G020100 Sobic005G020100 Sobic007G007800--Sobic005G020100 Sobic010G092400 Sobic010G092400 Sobic007G007800--Sobic010G092400 Sobic007G007800--Sobic001G083300 Sobic001G025900 Sobic001G025900 Sobic001G013400--Sobic001G025900 Sobic001G013400--Sobic007G007800 Sobic002G290000 Sobic002G290000 Sobic001G013400--Sobic002G290000 Sobic002G113400 Sobic002G113400 Sobic001G013400--Sobic002G113400 Sobic001G013400--Sobic008G129200 Sobic001G013400--Sobic001G142000 Sobic005G110535 Sobic005G110535 Sobic001G013400--Sobic005G110535 Sobic001G013400--Sobic001G083300 Sobic001G013400--Sobic004G331600 Sobic004G331600--Sobic001G456500 Sobic004G331600--Sobic008G129200 Sobic004G331600--Sobic010G054600 Sobic009G087000 Sobic009G087000 Sobic004G331600--Sobic009G087000 Sobic004G331600--Sobic001G142000 Sobic004G331600--Sobic002G223900 Sobic003G183700 Sobic003G183700 Sobic004G331600--Sobic003G183700 Sobic010G147700 Sobic010G147700 Sobic004G331600--Sobic010G147700 Sobic004G331600--Sobic007G007800 Sobic001G070300 Sobic001G070300 Sobic007G100600--Sobic001G070300 Sobic004G257600 Sobic004G257600 Sobic007G100600--Sobic004G257600 Sobic007G100600--Sobic003G387700 Sobic003G328500 Sobic003G328500 Sobic007G100600--Sobic003G328500 Sobic007G100600--Sobic001G142000 Sobic010G003100 Sobic010G003100 Sobic007G100600--Sobic010G003100 Sobic006G134200 Sobic006G134200 Sobic007G100600--Sobic006G134200 Sobic002G255500 Sobic002G255500 Sobic007G100600--Sobic002G255500 Sobic010G274000 Sobic010G274000 Sobic007G100600--Sobic010G274000 Sobic003G444300--Sobic001G456500 Sobic003G444300--Sobic001G083300 Sobic001G169800 Sobic001G169800 Sobic003G444300--Sobic001G169800 Sobic003G444300--Sobic001G105800 Sobic003G444300--Sobic001G142000 Sobic003G444300--Sobic004G331600 Sobic003G201000 Sobic003G201000 Sobic003G444300--Sobic003G201000 Sobic002G303800 Sobic002G303800 Sobic003G444300--Sobic002G303800 Sobic003G444300--Sobic010G105400 Sobic001G456500--Sobic006G116500 Sobic001G456500--Sobic004G331600 Sobic001G456500--Sobic001G142000 Sobic001G456500--Sobic001G083300 Sobic001G456500--Sobic008G129200 Sobic001G456500--Sobic002G223900 Sobic001G456500--Sobic001G169800 Sobic001G456500--Sobic003G444300 Sobic004G355500 Sobic004G355500 Sobic001G456500--Sobic004G355500 Sobic003G387700--Sobic004G257600 Sobic003G387700--Sobic006G134200 Sobic003G387700--Sobic010G105400 Sobic001G091500 Sobic001G091500 Sobic003G387700--Sobic001G091500 Sobic003G387700--Sobic001G105800 Sobic010G119300 Sobic010G119300 Sobic003G387700--Sobic010G119300 Sobic001G398400 Sobic001G398400 Sobic003G387700--Sobic001G398400 Sobic003G387700--Sobic003G328500 Sobic003G387700--Sobic007G100600
Octagon: transcription factors


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