Gene annotation
Transcriptome id Sobic.004G327600.1
Synonym Sb04g035690
Functional annotation expressed protein
UniProt C5XUD9
Pfam PF16740
Panther DB PTHR32017 PTHR32017:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008017; microtubule binding GO:0007067mitotic cell cycle GO:0007059chromosome segregation GO:0005876spindle microtubule GO:0000940condensed chromosome outer kinetochore GO:0000090mitotic anaphase


Orthologs (automatic annotation)
TAIR AT2G24970 : -
RAP-DB (Rice) LOC_Os01g56090.1 : expressed protein
MaizeGDB (Corn) Zm00025a032953
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G105800 OsFBX109 - F-box domain containing protein, expressed -
2 Sobic.002G289800 HMG1/2, putative, expressed -
3 Sobic.002G128000 receptor protein kinase, putative, expressed -
4 Sobic.003G085900 Glycosyl hydrolase. predicted target of sbi-miR-5568 and sbi-miR-6220 expressed in the stems of sweet sorghum(PubMedID : 26117170)@glycosyl hydrolase, family 31, putative, expressed K15925: alpha-D-xyloside xylohydrolase
5 Sobic.010G092400 glycosyl transferase 8 domain containing protein, putative, expressed -
6 Sobic.001G289900 AT hook motif domain containing protein, expressed -
7 Sobic.004G075900 CSLA1 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
8 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
9 Sobic.003G444300 expressed protein K11550: SPBC25, kinetochore protein Spc25, animal type
10 Sobic.009G184200 RecF/RecN/SMC N terminal domain containing protein, expressed K06675: structural maintenance of chromosome 4
11 Sobic.007G007800 DNA repair metallo-beta-lactamase, putative, expressed K15340: DCLRE1A, SNM1A, DNA cross-link repair 1A protein
12 Sobic.003G204200 AP2/B3 transcription factor(PubMedID : 27016024)@B3 DNA binding domain containing protein, expressed -
13 Sobic.002G237000 fasciclin domain containing protein, expressed -
14 Sobic.007G132900 linker histone H1 and H5 family protein, expressed -
15 Sobic.004G237000 down-regulated TF in developmental senescence(PubMedID : 27586543)@"PGL2(Ortholog in rice:Heang and Sassa, 2012b(PubMedID : 31659886)@helix-loop-helix DNA-binding domain containing protein, expressed -
16 Sobic.003G316601 - -
17 Sobic.001G142000 deoxyuridine 5-triphosphate nucleotidohydrolase, putative, expressed K01520: dut, dUTP pyrophosphatase
18 Sobic.003G387700 expressed protein -
19 Sobic.001G013400 nuf2 family protein, expressed -
20 Sobic.001G300400 expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic004G327600 Sobic004G327600 Sobic001G105800 Sobic001G105800 Sobic004G327600--Sobic001G105800 Sobic002G289800 Sobic002G289800 Sobic004G327600--Sobic002G289800 Sobic002G128000 Sobic002G128000 Sobic004G327600--Sobic002G128000 Sobic003G085900 Sobic003G085900 Sobic004G327600--Sobic003G085900 Sobic010G092400 Sobic010G092400 Sobic004G327600--Sobic010G092400 Sobic001G289900 Sobic001G289900 Sobic004G327600--Sobic001G289900 Sobic004G075900 Sobic004G075900 Sobic004G327600--Sobic004G075900 Sobic005G062600 Sobic005G062600 Sobic004G327600--Sobic005G062600 Sobic003G444300 Sobic003G444300 Sobic004G327600--Sobic003G444300 Sobic007G007800 Sobic007G007800 Sobic001G105800--Sobic007G007800 Sobic002G223900 Sobic002G223900 Sobic001G105800--Sobic002G223900 Sobic009G184200 Sobic009G184200 Sobic001G105800--Sobic009G184200 Sobic001G105800--Sobic003G444300 Sobic003G387700 Sobic003G387700 Sobic001G105800--Sobic003G387700 Sobic001G083300 Sobic001G083300 Sobic001G105800--Sobic001G083300 Sobic001G456500 Sobic001G456500 Sobic001G105800--Sobic001G456500 Sobic010G105400 Sobic010G105400 Sobic001G105800--Sobic010G105400 Sobic009G172950 Sobic009G172950 Sobic001G105800--Sobic009G172950 Sobic002G289800--Sobic001G289900 Sobic007G017700 Sobic007G017700 Sobic002G289800--Sobic007G017700 Sobic003G316601 Sobic003G316601 Sobic002G289800--Sobic003G316601 Sobic004G237000 Sobic004G237000 Sobic002G289800--Sobic004G237000 Sobic002G289800--Sobic004G327600 Sobic007G132900 Sobic007G132900 Sobic002G289800--Sobic007G132900 Sobic010G222100 Sobic010G222100 Sobic002G289800--Sobic010G222100 Sobic001G300400 Sobic001G300400 Sobic002G289800--Sobic001G300400 Sobic006G081800 Sobic006G081800 Sobic002G289800--Sobic006G081800 Sobic002G128000--Sobic003G085900 Sobic002G128000--Sobic010G092400 Sobic002G237000 Sobic002G237000 Sobic002G128000--Sobic002G237000 Sobic002G128000--Sobic004G327600 Sobic002G128000--Sobic004G075900 Sobic002G128000--Sobic001G105800 Sobic004G229200 Sobic004G229200 Sobic002G128000--Sobic004G229200 Sobic002G128000--Sobic002G289800 Sobic002G178800 Sobic002G178800 Sobic002G128000--Sobic002G178800 Sobic006G107500 Sobic006G107500 Sobic003G085900--Sobic006G107500 Sobic002G360600 Sobic002G360600 Sobic003G085900--Sobic002G360600 Sobic003G085900--Sobic004G237000 Sobic003G085900--Sobic010G092400 Sobic002G430700 Sobic002G430700 Sobic003G085900--Sobic002G430700 Sobic007G147200 Sobic007G147200 Sobic003G085900--Sobic007G147200 Sobic006G163300 Sobic006G163300 Sobic003G085900--Sobic006G163300 Sobic003G046400 Sobic003G046400 Sobic003G085900--Sobic003G046400 Sobic003G085900--Sobic003G316601 Sobic007G116800 Sobic007G116800 Sobic010G092400--Sobic007G116800 Sobic010G092400--Sobic005G062600 Sobic010G092400--Sobic003G085900 Sobic010G092400--Sobic007G007800 Sobic010G092400--Sobic009G184200 Sobic010G269700 Sobic010G269700 Sobic010G092400--Sobic010G269700 Sobic007G087800 Sobic007G087800 Sobic010G092400--Sobic007G087800 Sobic010G092400--Sobic003G387700 Sobic008G070700 Sobic008G070700 Sobic010G092400--Sobic008G070700 Sobic001G289900--Sobic010G105400 Sobic001G289900--Sobic002G289800 Sobic001G289900--Sobic007G132900 Sobic001G289900--Sobic003G387700 Sobic004G047100 Sobic004G047100 Sobic001G289900--Sobic004G047100 Sobic001G398400 Sobic001G398400 Sobic001G289900--Sobic001G398400 Sobic004G273000 Sobic004G273000 Sobic001G289900--Sobic004G273000 Sobic001G091500 Sobic001G091500 Sobic001G289900--Sobic001G091500 Sobic002G426800 Sobic002G426800 Sobic001G289900--Sobic002G426800 Sobic001G142000 Sobic001G142000 Sobic004G075900--Sobic001G142000 Sobic004G075900--Sobic001G105800 Sobic004G075900--Sobic007G007800 Sobic001G013400 Sobic001G013400 Sobic004G075900--Sobic001G013400 Sobic004G331600 Sobic004G331600 Sobic004G075900--Sobic004G331600 Sobic007G100600 Sobic007G100600 Sobic004G075900--Sobic007G100600 Sobic004G075900--Sobic003G444300 Sobic004G075900--Sobic001G456500 Sobic004G075900--Sobic003G387700 Sobic004G267600 Sobic004G267600 Sobic005G062600--Sobic004G267600 Sobic005G062600--Sobic010G092400 Sobic007G121600 Sobic007G121600 Sobic005G062600--Sobic007G121600 Sobic001G079900 Sobic001G079900 Sobic005G062600--Sobic001G079900 Sobic010G129700 Sobic010G129700 Sobic005G062600--Sobic010G129700 Sobic007G161600 Sobic007G161600 Sobic005G062600--Sobic007G161600 Sobic001G493900 Sobic001G493900 Sobic005G062600--Sobic001G493900 Sobic005G062600--Sobic008G070700 Sobic003G019900 Sobic003G019900 Sobic005G062600--Sobic003G019900 Sobic003G444300--Sobic001G456500 Sobic003G444300--Sobic001G083300 Sobic001G169800 Sobic001G169800 Sobic003G444300--Sobic001G169800 Sobic003G444300--Sobic001G105800 Sobic003G444300--Sobic001G142000 Sobic003G444300--Sobic004G331600 Sobic003G201000 Sobic003G201000 Sobic003G444300--Sobic003G201000 Sobic002G303800 Sobic002G303800 Sobic003G444300--Sobic002G303800 Sobic003G444300--Sobic010G105400
Octagon: transcription factors


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