Gene annotation
Transcriptome id Sobic.002G237000.1
Synonym FLA1, Sb02g027510
Functional annotation fasciclin domain containing protein, expressed
UniProt A0A1B6QD45
Pfam PF02469
Panther DB PTHR32382 PTHR32382:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G55730 : FASCICLIN-like arabinogalactan 1
RAP-DB (Rice) LOC_Os08g38270.1 : fasciclin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a047373 , Zm00025a014148 , Zm00025a033729
Brachypodium -
Barley HORVU2Hr1G085740.1 , HORVU2Hr1G085740.2 , HORVU2Hr1G085740.3 , HORVU5Hr1G071010.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G228000 glycine-rich protein 2, putative -
2 Sobic.001G137800 ankyrin, putative, expressed -
3 Sobic.001G216400 nodulin, putative, expressed K07192: flotillin
4 Sobic.009G075500 OsMADS58 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
5 Sobic.007G043000 transcription factor X1, putative, expressed -
6 Sobic.001G235200 MYB family transcription factor, putative, expressed -
7 Sobic.003G204200 AP2/B3 transcription factor(PubMedID : 27016024)@B3 DNA binding domain containing protein, expressed -
8 Sobic.004G234600 expressed protein -
9 Sobic.003G092300 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
10 Sobic.003G374100 beta-galactosidase precursor, putative, expressed -
11 Sobic.005G166100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
12 Sobic.006G213900 OsMADS31 - MADS-box family gene with MIKCc type-box, expressed -
13 Sobic.001G419500 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
14 Sobic.009G063700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
15 Sobic.003G063700 - -
16 Sobic.003G006000 expressed protein -
17 Sobic.006G097300 F-box protein FBW2, putative, expressed -
18 Sobic.003G300000 expressed protein -
19 Sobic.001G158100 MBTB43 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
20 Sobic.003G085900 Glycosyl hydrolase. predicted target of sbi-miR-5568 and sbi-miR-6220 expressed in the stems of sweet sorghum(PubMedID : 26117170)@glycosyl hydrolase, family 31, putative, expressed K15925: alpha-D-xyloside xylohydrolase


Gene co-expression network
sample Sobic002G237000 Sobic002G237000 Sobic006G228000 Sobic006G228000 Sobic002G237000--Sobic006G228000 Sobic001G137800 Sobic001G137800 Sobic002G237000--Sobic001G137800 Sobic001G216400 Sobic001G216400 Sobic002G237000--Sobic001G216400 Sobic009G075500 Sobic009G075500 Sobic002G237000--Sobic009G075500 Sobic007G043000 Sobic007G043000 Sobic002G237000--Sobic007G043000 Sobic001G235200 Sobic001G235200 Sobic002G237000--Sobic001G235200 Sobic003G204200 Sobic003G204200 Sobic002G237000--Sobic003G204200 Sobic004G234600 Sobic004G234600 Sobic002G237000--Sobic004G234600 Sobic003G092300 Sobic003G092300 Sobic002G237000--Sobic003G092300 Sobic006G228000--Sobic001G137800 Sobic003G374100 Sobic003G374100 Sobic006G228000--Sobic003G374100 Sobic006G228000--Sobic007G043000 Sobic006G228000--Sobic001G235200 Sobic006G228000--Sobic002G237000 Sobic006G228000--Sobic004G234600 Sobic006G228000--Sobic003G092300 Sobic003G300000 Sobic003G300000 Sobic006G228000--Sobic003G300000 Sobic002G121900 Sobic002G121900 Sobic006G228000--Sobic002G121900 Sobic001G137800--Sobic006G228000 Sobic001G137800--Sobic001G235200 Sobic001G137800--Sobic003G374100 Sobic001G137800--Sobic007G043000 Sobic001G137800--Sobic002G121900 Sobic001G235100 Sobic001G235100 Sobic001G137800--Sobic001G235100 Sobic006G213900 Sobic006G213900 Sobic001G137800--Sobic006G213900 Sobic001G137800--Sobic001G216400 Sobic007G128200 Sobic007G128200 Sobic001G137800--Sobic007G128200 Sobic001G216400--Sobic009G075500 Sobic001G216400--Sobic004G234600 Sobic009G063700 Sobic009G063700 Sobic001G216400--Sobic009G063700 Sobic005G166100 Sobic005G166100 Sobic001G216400--Sobic005G166100 Sobic001G419500 Sobic001G419500 Sobic001G216400--Sobic001G419500 Sobic003G381100 Sobic003G381100 Sobic001G216400--Sobic003G381100 Sobic001G216400--Sobic006G213900 Sobic007G193300 Sobic007G193300 Sobic001G216400--Sobic007G193300 Sobic004G056000 Sobic004G056000 Sobic001G216400--Sobic004G056000 Sobic001G459400 Sobic001G459400 Sobic009G075500--Sobic001G459400 Sobic009G075500--Sobic001G216400 Sobic009G075500--Sobic009G063700 Sobic009G075500--Sobic003G092300 Sobic002G239101 Sobic002G239101 Sobic009G075500--Sobic002G239101 Sobic009G075500--Sobic006G213900 Sobic001G158100 Sobic001G158100 Sobic009G075500--Sobic001G158100 Sobic009G075500--Sobic003G300000 Sobic009G075500--Sobic004G056000 Sobic007G043000--Sobic001G235100 Sobic007G043000--Sobic002G121900 Sobic004G254100 Sobic004G254100 Sobic007G043000--Sobic004G254100 Sobic008G138200 Sobic008G138200 Sobic007G043000--Sobic008G138200 Sobic007G043000--Sobic001G137800 Sobic007G043000--Sobic001G216400 Sobic007G043000--Sobic003G381100 Sobic007G043000--Sobic007G128200 Sobic003G063700 Sobic003G063700 Sobic007G043000--Sobic003G063700 Sobic001G235200--Sobic006G213900 Sobic001G235200--Sobic003G063700 Sobic006G134700 Sobic006G134700 Sobic001G235200--Sobic006G134700 Sobic001G235200--Sobic002G239101 Sobic001G235200--Sobic001G137800 Sobic002G159000 Sobic002G159000 Sobic001G235200--Sobic002G159000 Sobic004G168000 Sobic004G168000 Sobic001G235200--Sobic004G168000 Sobic005G070101 Sobic005G070101 Sobic001G235200--Sobic005G070101 Sobic009G211300 Sobic009G211300 Sobic001G235200--Sobic009G211300 Sobic003G204200--Sobic002G237000 Sobic004G321400 Sobic004G321400 Sobic003G204200--Sobic004G321400 Sobic001G105800 Sobic001G105800 Sobic003G204200--Sobic001G105800 Sobic010G255000 Sobic010G255000 Sobic003G204200--Sobic010G255000 Sobic004G035800 Sobic004G035800 Sobic003G204200--Sobic004G035800 Sobic009G172950 Sobic009G172950 Sobic003G204200--Sobic009G172950 Sobic010G092400 Sobic010G092400 Sobic003G204200--Sobic010G092400 Sobic004G190500 Sobic004G190500 Sobic003G204200--Sobic004G190500 Sobic002G223900 Sobic002G223900 Sobic003G204200--Sobic002G223900 Sobic004G234600--Sobic007G128200 Sobic004G234600--Sobic001G216400 Sobic004G234600--Sobic009G063700 Sobic002G053350 Sobic002G053350 Sobic004G234600--Sobic002G053350 Sobic001G457600 Sobic001G457600 Sobic004G234600--Sobic001G457600 Sobic004G234600--Sobic001G419500 Sobic010G194600 Sobic010G194600 Sobic004G234600--Sobic010G194600 Sobic004G234600--Sobic001G158100 Sobic010G183800 Sobic010G183800 Sobic004G234600--Sobic010G183800 Sobic003G092300--Sobic001G459400 Sobic003G092300--Sobic010G183800 Sobic001G459300 Sobic001G459300 Sobic003G092300--Sobic001G459300 Sobic001G106500 Sobic001G106500 Sobic003G092300--Sobic001G106500 Sobic003G092300--Sobic003G300000 Sobic010G048600 Sobic010G048600 Sobic003G092300--Sobic010G048600 Sobic003G092300--Sobic009G075500 Sobic003G092300--Sobic001G158100 Sobic005G070700 Sobic005G070700 Sobic003G092300--Sobic005G070700
Octagon: transcription factors


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