Gene annotation
Transcriptome id Sobic.003G063700.1,Sobic.003G063700.2
Synonym
Functional annotation -
UniProt A0A1B6Q1L7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G063700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G235200 MYB family transcription factor, putative, expressed -
2 Sobic.009G211300 MATH domain containing protein, expressed -
3 Sobic.006G134700 endoglucanase, putative, expressed -
4 Sobic.006G213900 OsMADS31 - MADS-box family gene with MIKCc type-box, expressed -
5 Sobic.001G158100 MBTB43 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
6 Sobic.001G216400 nodulin, putative, expressed K07192: flotillin
7 Sobic.002G239101 - -
8 Sobic.001G141900 OsSub53 - Putative Subtilisin homologue, expressed -
9 Sobic.008G138200 RNA recognition motif family protein, expressed -
10 Sobic.004G056000 OsMADS29 - MADS-box family gene with MIKCc type-box, expressed -
11 Sobic.006G163200 COBRA, putative, expressed -
12 Sobic.001G235100 MYB family transcription factor, putative, expressed -
13 Sobic.007G043000 transcription factor X1, putative, expressed -
14 Sobic.007G217800 expressed protein -
15 Sobic.001G137800 ankyrin, putative, expressed -
16 Sobic.009G063700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
17 Sobic.003G381100 OsMADS21 - MADS-box family gene with MIKCc type-box, expressed -
18 Sobic.009G075500 OsMADS58 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
19 Sobic.007G128200 expressed protein -
20 Sobic.002G159000 60S ribosomal protein L22-2, putative, expressed K02891: RP-L22e, large subunit ribosomal protein L22e


Gene co-expression network
sample Sobic003G063700 Sobic003G063700 Sobic001G235200 Sobic001G235200 Sobic003G063700--Sobic001G235200 Sobic009G211300 Sobic009G211300 Sobic003G063700--Sobic009G211300 Sobic006G134700 Sobic006G134700 Sobic003G063700--Sobic006G134700 Sobic006G213900 Sobic006G213900 Sobic003G063700--Sobic006G213900 Sobic001G158100 Sobic001G158100 Sobic003G063700--Sobic001G158100 Sobic001G216400 Sobic001G216400 Sobic003G063700--Sobic001G216400 Sobic002G239101 Sobic002G239101 Sobic003G063700--Sobic002G239101 Sobic001G141900 Sobic001G141900 Sobic003G063700--Sobic001G141900 Sobic008G138200 Sobic008G138200 Sobic003G063700--Sobic008G138200 Sobic001G235200--Sobic006G213900 Sobic001G235200--Sobic003G063700 Sobic001G235200--Sobic006G134700 Sobic001G235200--Sobic002G239101 Sobic001G137800 Sobic001G137800 Sobic001G235200--Sobic001G137800 Sobic002G159000 Sobic002G159000 Sobic001G235200--Sobic002G159000 Sobic004G168000 Sobic004G168000 Sobic001G235200--Sobic004G168000 Sobic005G070101 Sobic005G070101 Sobic001G235200--Sobic005G070101 Sobic001G235200--Sobic009G211300 Sobic009G211300--Sobic003G063700 Sobic009G211300--Sobic001G158100 Sobic009G211300--Sobic006G134700 Sobic009G211300--Sobic001G235200 Sobic009G211300--Sobic001G216400 Sobic009G063700 Sobic009G063700 Sobic009G211300--Sobic009G063700 Sobic009G075500 Sobic009G075500 Sobic009G211300--Sobic009G075500 Sobic009G211300--Sobic006G213900 Sobic004G056000 Sobic004G056000 Sobic009G211300--Sobic004G056000 Sobic006G134700--Sobic002G239101 Sobic006G134700--Sobic005G070101 Sobic006G134700--Sobic004G168000 Sobic006G134700--Sobic002G159000 Sobic006G134700--Sobic001G235200 Sobic006G134700--Sobic006G213900 Sobic006G134700--Sobic003G063700 Sobic006G134700--Sobic009G211300 Sobic001G459400 Sobic001G459400 Sobic006G134700--Sobic001G459400 Sobic006G213900--Sobic001G235200 Sobic006G213900--Sobic002G239101 Sobic006G213900--Sobic006G134700 Sobic006G213900--Sobic002G159000 Sobic006G213900--Sobic004G168000 Sobic006G213900--Sobic005G070101 Sobic006G213900--Sobic001G216400 Sobic006G213900--Sobic009G075500 Sobic006G213900--Sobic003G063700 Sobic001G158100--Sobic009G063700 Sobic001G158100--Sobic009G211300 Sobic001G158100--Sobic001G459400 Sobic001G158100--Sobic004G056000 Sobic003G092300 Sobic003G092300 Sobic001G158100--Sobic003G092300 Sobic010G183800 Sobic010G183800 Sobic001G158100--Sobic010G183800 Sobic001G158100--Sobic009G075500 Sobic007G128200 Sobic007G128200 Sobic001G158100--Sobic007G128200 Sobic001G158100--Sobic001G216400 Sobic001G216400--Sobic009G075500 Sobic004G234600 Sobic004G234600 Sobic001G216400--Sobic004G234600 Sobic001G216400--Sobic009G063700 Sobic005G166100 Sobic005G166100 Sobic001G216400--Sobic005G166100 Sobic001G419500 Sobic001G419500 Sobic001G216400--Sobic001G419500 Sobic003G381100 Sobic003G381100 Sobic001G216400--Sobic003G381100 Sobic001G216400--Sobic006G213900 Sobic007G193300 Sobic007G193300 Sobic001G216400--Sobic007G193300 Sobic001G216400--Sobic004G056000 Sobic002G239101--Sobic002G159000 Sobic002G239101--Sobic004G168000 Sobic002G239101--Sobic005G070101 Sobic002G239101--Sobic006G134700 Sobic002G239101--Sobic006G213900 Sobic002G239101--Sobic001G235200 Sobic002G239101--Sobic001G459400 Sobic002G239101--Sobic009G075500 Sobic002G239101--Sobic009G063700 Sobic003G044800 Sobic003G044800 Sobic001G141900--Sobic003G044800 Sobic001G141900--Sobic008G138200 Sobic001G141900--Sobic003G063700 Sobic001G141900--Sobic004G056000 Sobic001G141900--Sobic001G235200 Sobic006G163200 Sobic006G163200 Sobic001G141900--Sobic006G163200 Sobic001G141900--Sobic002G239101 Sobic001G235100 Sobic001G235100 Sobic001G141900--Sobic001G235100 Sobic007G043000 Sobic007G043000 Sobic001G141900--Sobic007G043000 Sobic008G138200--Sobic007G043000 Sobic008G138200--Sobic001G235100 Sobic004G254100 Sobic004G254100 Sobic008G138200--Sobic004G254100 Sobic001G287900 Sobic001G287900 Sobic008G138200--Sobic001G287900 Sobic008G138200--Sobic001G141900 Sobic008G138200--Sobic003G063700 Sobic008G138200--Sobic003G044800 Sobic001G152901 Sobic001G152901 Sobic008G138200--Sobic001G152901 Sobic008G138200--Sobic001G235200
Octagon: transcription factors


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