Gene annotation
Transcriptome id Sobic.007G128200.3,Sobic.007G128200.2,Sobic.007G128200.4,Sobic.007G128200.5,Sobic.007G128200.1
Synonym Sb07g020440
Functional annotation expressed protein
UniProt C5YKY1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g32330.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.007G128200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G234600 expressed protein -
2 Sobic.009G063700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
3 Sobic.010G194600 CW-type Zinc Finger, putative, expressed -
4 Sobic.001G216400 nodulin, putative, expressed K07192: flotillin
5 Sobic.001G158100 MBTB43 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
6 Sobic.001G457600 piwi domain containing protein, expressed -
7 Sobic.004G056000 OsMADS29 - MADS-box family gene with MIKCc type-box, expressed -
8 Sobic.005G166100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
9 Sobic.007G043000 transcription factor X1, putative, expressed -
10 Sobic.002G053350 - -
11 Sobic.002G121900 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
12 Sobic.001G419500 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
13 Sobic.007G193300 OsMADS7 - MADS-box family gene with MIKCc type-box, expressed -
14 Sobic.001G137500 ankyrin, putative, expressed -
15 Sobic.001G137800 ankyrin, putative, expressed -
16 Sobic.004G254100 pleiotropic drug resistance protein, putative, expressed -
17 Sobic.001G171200 expressed protein -
18 Sobic.006G097300 F-box protein FBW2, putative, expressed -
19 Sobic.003G381100 OsMADS21 - MADS-box family gene with MIKCc type-box, expressed -
20 Sobic.001G235100 MYB family transcription factor, putative, expressed -


Gene co-expression network
sample Sobic007G128200 Sobic007G128200 Sobic004G234600 Sobic004G234600 Sobic007G128200--Sobic004G234600 Sobic009G063700 Sobic009G063700 Sobic007G128200--Sobic009G063700 Sobic010G194600 Sobic010G194600 Sobic007G128200--Sobic010G194600 Sobic001G216400 Sobic001G216400 Sobic007G128200--Sobic001G216400 Sobic001G158100 Sobic001G158100 Sobic007G128200--Sobic001G158100 Sobic001G457600 Sobic001G457600 Sobic007G128200--Sobic001G457600 Sobic004G056000 Sobic004G056000 Sobic007G128200--Sobic004G056000 Sobic005G166100 Sobic005G166100 Sobic007G128200--Sobic005G166100 Sobic007G043000 Sobic007G043000 Sobic007G128200--Sobic007G043000 Sobic004G234600--Sobic007G128200 Sobic004G234600--Sobic001G216400 Sobic004G234600--Sobic009G063700 Sobic002G053350 Sobic002G053350 Sobic004G234600--Sobic002G053350 Sobic004G234600--Sobic001G457600 Sobic001G419500 Sobic001G419500 Sobic004G234600--Sobic001G419500 Sobic004G234600--Sobic010G194600 Sobic004G234600--Sobic001G158100 Sobic010G183800 Sobic010G183800 Sobic004G234600--Sobic010G183800 Sobic009G063700--Sobic001G158100 Sobic009G063700--Sobic004G056000 Sobic001G459400 Sobic001G459400 Sobic009G063700--Sobic001G459400 Sobic009G075500 Sobic009G075500 Sobic009G063700--Sobic009G075500 Sobic009G063700--Sobic007G128200 Sobic009G063700--Sobic010G183800 Sobic009G063700--Sobic001G216400 Sobic009G063700--Sobic004G234600 Sobic009G063700--Sobic001G419500 Sobic010G194600--Sobic001G457600 Sobic006G271600 Sobic006G271600 Sobic010G194600--Sobic006G271600 Sobic010G194600--Sobic007G128200 Sobic001G137500 Sobic001G137500 Sobic010G194600--Sobic001G137500 Sobic010G194600--Sobic001G419500 Sobic003G088600 Sobic003G088600 Sobic010G194600--Sobic003G088600 Sobic010G194600--Sobic004G234600 Sobic010G194600--Sobic009G063700 Sobic003G300000 Sobic003G300000 Sobic010G194600--Sobic003G300000 Sobic001G216400--Sobic009G075500 Sobic001G216400--Sobic004G234600 Sobic001G216400--Sobic009G063700 Sobic001G216400--Sobic005G166100 Sobic001G216400--Sobic001G419500 Sobic003G381100 Sobic003G381100 Sobic001G216400--Sobic003G381100 Sobic006G213900 Sobic006G213900 Sobic001G216400--Sobic006G213900 Sobic007G193300 Sobic007G193300 Sobic001G216400--Sobic007G193300 Sobic001G216400--Sobic004G056000 Sobic001G158100--Sobic009G063700 Sobic009G211300 Sobic009G211300 Sobic001G158100--Sobic009G211300 Sobic001G158100--Sobic001G459400 Sobic001G158100--Sobic004G056000 Sobic003G092300 Sobic003G092300 Sobic001G158100--Sobic003G092300 Sobic001G158100--Sobic010G183800 Sobic001G158100--Sobic009G075500 Sobic001G158100--Sobic007G128200 Sobic001G158100--Sobic001G216400 Sobic001G457600--Sobic001G137500 Sobic001G457600--Sobic010G194600 Sobic001G457600--Sobic001G419500 Sobic002G258000 Sobic002G258000 Sobic001G457600--Sobic002G258000 Sobic001G457600--Sobic007G128200 Sobic001G457600--Sobic004G234600 Sobic001G457600--Sobic009G063700 Sobic004G281000 Sobic004G281000 Sobic001G457600--Sobic004G281000 Sobic001G457600--Sobic007G193300 Sobic004G056000--Sobic003G381100 Sobic004G056000--Sobic009G063700 Sobic003G020800 Sobic003G020800 Sobic004G056000--Sobic003G020800 Sobic004G056000--Sobic001G158100 Sobic004G056000--Sobic005G166100 Sobic004G056000--Sobic001G216400 Sobic004G056000--Sobic009G075500 Sobic004G056000--Sobic007G128200 Sobic002G239101 Sobic002G239101 Sobic004G056000--Sobic002G239101 Sobic005G166100--Sobic001G216400 Sobic005G166100--Sobic004G056000 Sobic005G166100--Sobic009G063700 Sobic005G166100--Sobic007G128200 Sobic005G166100--Sobic003G381100 Sobic005G166100--Sobic009G075500 Sobic005G166100--Sobic001G419500 Sobic005G166100--Sobic007G193300 Sobic006G097300 Sobic006G097300 Sobic005G166100--Sobic006G097300 Sobic001G235100 Sobic001G235100 Sobic007G043000--Sobic001G235100 Sobic002G121900 Sobic002G121900 Sobic007G043000--Sobic002G121900 Sobic004G254100 Sobic004G254100 Sobic007G043000--Sobic004G254100 Sobic008G138200 Sobic008G138200 Sobic007G043000--Sobic008G138200 Sobic001G137800 Sobic001G137800 Sobic007G043000--Sobic001G137800 Sobic007G043000--Sobic001G216400 Sobic007G043000--Sobic003G381100 Sobic007G043000--Sobic007G128200 Sobic003G063700 Sobic003G063700 Sobic007G043000--Sobic003G063700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.