Gene annotation
Transcriptome id Sobic.001G137800.2,Sobic.001G137800.1
Synonym Sb01g012040
Functional annotation ankyrin, putative, expressed
UniProt C5WPN0 , A0A1Z5S5J2
Pfam PF00515 PF13414 PF12796
Panther DB PTHR22904 PTHR22904:SF354
NCBI CDD KOG4214; Myotrophin and similar proteins KOG441226S proteasome regulatory complex, subunit PSMD10
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G04710 : ankyrin repeat family protein
RAP-DB (Rice) LOC_Os03g47620.1,LOC_Os03g47650.1 : ankyrin, putative, expressed
MaizeGDB (Corn) Zm00025a026806 , Zm00025a007471
Brachypodium KQK13792
Barley HORVU4Hr1G003660.2 , HORVU4Hr1G003660.1
Wheat TraesCS4B02G024300 , TraesCS4D02G021900 , TraesCS4D02G021900 , TraesCS4A02G290000 , TraesCS4A02G290000 , TraesCS4B02G024300
Populus -


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cDNA sequences
Sobic.001G137800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G228000 glycine-rich protein 2, putative -
2 Sobic.001G235200 MYB family transcription factor, putative, expressed -
3 Sobic.003G374100 beta-galactosidase precursor, putative, expressed -
4 Sobic.007G043000 transcription factor X1, putative, expressed -
5 Sobic.002G121900 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
6 Sobic.001G235100 MYB family transcription factor, putative, expressed -
7 Sobic.006G213900 OsMADS31 - MADS-box family gene with MIKCc type-box, expressed -
8 Sobic.001G216400 nodulin, putative, expressed K07192: flotillin
9 Sobic.007G128200 expressed protein -
10 Sobic.009G063700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
11 Sobic.005G166100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
12 Sobic.004G234600 expressed protein -
13 Sobic.002G239101 - -
14 Sobic.001G419500 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
15 Sobic.009G075500 OsMADS58 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
16 Sobic.003G063700 - -
17 Sobic.002G053350 - -
18 Sobic.001G086400 OsMADS34 - MADS-box family gene with MIKCc type-box, expressed -
19 Sobic.008G138200 RNA recognition motif family protein, expressed -
20 Sobic.003G088600 transcription factor X1, putative, expressed -


Gene co-expression network
sample Sobic001G137800 Sobic001G137800 Sobic006G228000 Sobic006G228000 Sobic001G137800--Sobic006G228000 Sobic001G235200 Sobic001G235200 Sobic001G137800--Sobic001G235200 Sobic003G374100 Sobic003G374100 Sobic001G137800--Sobic003G374100 Sobic007G043000 Sobic007G043000 Sobic001G137800--Sobic007G043000 Sobic002G121900 Sobic002G121900 Sobic001G137800--Sobic002G121900 Sobic001G235100 Sobic001G235100 Sobic001G137800--Sobic001G235100 Sobic006G213900 Sobic006G213900 Sobic001G137800--Sobic006G213900 Sobic001G216400 Sobic001G216400 Sobic001G137800--Sobic001G216400 Sobic007G128200 Sobic007G128200 Sobic001G137800--Sobic007G128200 Sobic006G228000--Sobic001G137800 Sobic006G228000--Sobic003G374100 Sobic006G228000--Sobic007G043000 Sobic006G228000--Sobic001G235200 Sobic002G237000 Sobic002G237000 Sobic006G228000--Sobic002G237000 Sobic004G234600 Sobic004G234600 Sobic006G228000--Sobic004G234600 Sobic003G092300 Sobic003G092300 Sobic006G228000--Sobic003G092300 Sobic003G300000 Sobic003G300000 Sobic006G228000--Sobic003G300000 Sobic006G228000--Sobic002G121900 Sobic001G235200--Sobic006G213900 Sobic003G063700 Sobic003G063700 Sobic001G235200--Sobic003G063700 Sobic006G134700 Sobic006G134700 Sobic001G235200--Sobic006G134700 Sobic002G239101 Sobic002G239101 Sobic001G235200--Sobic002G239101 Sobic001G235200--Sobic001G137800 Sobic002G159000 Sobic002G159000 Sobic001G235200--Sobic002G159000 Sobic004G168000 Sobic004G168000 Sobic001G235200--Sobic004G168000 Sobic005G070101 Sobic005G070101 Sobic001G235200--Sobic005G070101 Sobic009G211300 Sobic009G211300 Sobic001G235200--Sobic009G211300 Sobic003G374100--Sobic001G137800 Sobic003G374100--Sobic006G228000 Sobic003G129200 Sobic003G129200 Sobic003G374100--Sobic003G129200 Sobic003G374100--Sobic007G043000 Sobic003G374100--Sobic002G121900 Sobic003G374100--Sobic004G234600 Sobic002G053350 Sobic002G053350 Sobic003G374100--Sobic002G053350 Sobic003G374100--Sobic001G235200 Sobic003G374100--Sobic001G235100 Sobic007G043000--Sobic001G235100 Sobic007G043000--Sobic002G121900 Sobic004G254100 Sobic004G254100 Sobic007G043000--Sobic004G254100 Sobic008G138200 Sobic008G138200 Sobic007G043000--Sobic008G138200 Sobic007G043000--Sobic001G137800 Sobic007G043000--Sobic001G216400 Sobic003G381100 Sobic003G381100 Sobic007G043000--Sobic003G381100 Sobic007G043000--Sobic007G128200 Sobic007G043000--Sobic003G063700 Sobic002G121900--Sobic007G043000 Sobic001G287900 Sobic001G287900 Sobic002G121900--Sobic001G287900 Sobic002G121900--Sobic001G137800 Sobic002G121900--Sobic007G128200 Sobic002G121900--Sobic001G235100 Sobic007G193300 Sobic007G193300 Sobic002G121900--Sobic007G193300 Sobic002G121900--Sobic008G138200 Sobic002G121900--Sobic003G374100 Sobic001G171200 Sobic001G171200 Sobic002G121900--Sobic001G171200 Sobic001G235100--Sobic007G043000 Sobic001G235100--Sobic004G254100 Sobic001G235100--Sobic008G138200 Sobic001G235100--Sobic002G121900 Sobic001G235100--Sobic001G137800 Sobic001G235100--Sobic006G213900 Sobic001G235100--Sobic001G235200 Sobic001G235100--Sobic003G063700 Sobic001G235100--Sobic001G216400 Sobic006G213900--Sobic001G235200 Sobic006G213900--Sobic002G239101 Sobic006G213900--Sobic006G134700 Sobic006G213900--Sobic002G159000 Sobic006G213900--Sobic004G168000 Sobic006G213900--Sobic005G070101 Sobic006G213900--Sobic001G216400 Sobic009G075500 Sobic009G075500 Sobic006G213900--Sobic009G075500 Sobic006G213900--Sobic003G063700 Sobic001G216400--Sobic009G075500 Sobic001G216400--Sobic004G234600 Sobic009G063700 Sobic009G063700 Sobic001G216400--Sobic009G063700 Sobic005G166100 Sobic005G166100 Sobic001G216400--Sobic005G166100 Sobic001G419500 Sobic001G419500 Sobic001G216400--Sobic001G419500 Sobic001G216400--Sobic003G381100 Sobic001G216400--Sobic006G213900 Sobic001G216400--Sobic007G193300 Sobic004G056000 Sobic004G056000 Sobic001G216400--Sobic004G056000 Sobic007G128200--Sobic004G234600 Sobic007G128200--Sobic009G063700 Sobic010G194600 Sobic010G194600 Sobic007G128200--Sobic010G194600 Sobic007G128200--Sobic001G216400 Sobic001G158100 Sobic001G158100 Sobic007G128200--Sobic001G158100 Sobic001G457600 Sobic001G457600 Sobic007G128200--Sobic001G457600 Sobic007G128200--Sobic004G056000 Sobic007G128200--Sobic005G166100 Sobic007G128200--Sobic007G043000
Octagon: transcription factors


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