Gene annotation
Transcriptome id Sobic.001G235100.2,Sobic.001G235100.3
Synonym TRFL3
Functional annotation MYB family transcription factor, putative, expressed
UniProt A0A1Z5S712
Pfam PF13921
Panther DB PTHR21717 PTHR21717:SF29
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G17460 : TRF-like 3
RAP-DB (Rice) LOC_Os10g30719.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a017716
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G235100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G043000 transcription factor X1, putative, expressed -
2 Sobic.004G254100 pleiotropic drug resistance protein, putative, expressed -
3 Sobic.008G138200 RNA recognition motif family protein, expressed -
4 Sobic.002G121900 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
5 Sobic.001G137800 ankyrin, putative, expressed -
6 Sobic.006G213900 OsMADS31 - MADS-box family gene with MIKCc type-box, expressed -
7 Sobic.001G235200 MYB family transcription factor, putative, expressed -
8 Sobic.003G063700 - -
9 Sobic.001G216400 nodulin, putative, expressed K07192: flotillin
10 Sobic.007G128200 expressed protein -
11 Sobic.009G211300 MATH domain containing protein, expressed -
12 Sobic.003G374100 beta-galactosidase precursor, putative, expressed -
13 Sobic.006G112300 RNA recognition motif family protein, expressed -
14 Sobic.001G141900 OsSub53 - Putative Subtilisin homologue, expressed -
15 Sobic.002G239101 - -
16 Sobic.001G152901 "YABBY transcription factor, "(PubMedID : 22581231) -
17 Sobic.006G163200 COBRA, putative, expressed -
18 Sobic.003G381100 OsMADS21 - MADS-box family gene with MIKCc type-box, expressed -
19 Sobic.004G056000 OsMADS29 - MADS-box family gene with MIKCc type-box, expressed -
20 Sobic.002G053350 - -


Gene co-expression network
sample Sobic001G235100 Sobic001G235100 Sobic007G043000 Sobic007G043000 Sobic001G235100--Sobic007G043000 Sobic004G254100 Sobic004G254100 Sobic001G235100--Sobic004G254100 Sobic008G138200 Sobic008G138200 Sobic001G235100--Sobic008G138200 Sobic002G121900 Sobic002G121900 Sobic001G235100--Sobic002G121900 Sobic001G137800 Sobic001G137800 Sobic001G235100--Sobic001G137800 Sobic006G213900 Sobic006G213900 Sobic001G235100--Sobic006G213900 Sobic001G235200 Sobic001G235200 Sobic001G235100--Sobic001G235200 Sobic003G063700 Sobic003G063700 Sobic001G235100--Sobic003G063700 Sobic001G216400 Sobic001G216400 Sobic001G235100--Sobic001G216400 Sobic007G043000--Sobic001G235100 Sobic007G043000--Sobic002G121900 Sobic007G043000--Sobic004G254100 Sobic007G043000--Sobic008G138200 Sobic007G043000--Sobic001G137800 Sobic007G043000--Sobic001G216400 Sobic003G381100 Sobic003G381100 Sobic007G043000--Sobic003G381100 Sobic007G128200 Sobic007G128200 Sobic007G043000--Sobic007G128200 Sobic007G043000--Sobic003G063700 Sobic004G254100--Sobic007G043000 Sobic004G254100--Sobic001G235100 Sobic004G254100--Sobic001G216400 Sobic004G254100--Sobic003G381100 Sobic004G254100--Sobic008G138200 Sobic004G254100--Sobic007G128200 Sobic007G193300 Sobic007G193300 Sobic004G254100--Sobic007G193300 Sobic004G056000 Sobic004G056000 Sobic004G254100--Sobic004G056000 Sobic004G254100--Sobic002G121900 Sobic008G138200--Sobic007G043000 Sobic008G138200--Sobic001G235100 Sobic008G138200--Sobic004G254100 Sobic001G287900 Sobic001G287900 Sobic008G138200--Sobic001G287900 Sobic001G141900 Sobic001G141900 Sobic008G138200--Sobic001G141900 Sobic008G138200--Sobic003G063700 Sobic003G044800 Sobic003G044800 Sobic008G138200--Sobic003G044800 Sobic001G152901 Sobic001G152901 Sobic008G138200--Sobic001G152901 Sobic008G138200--Sobic001G235200 Sobic002G121900--Sobic007G043000 Sobic002G121900--Sobic001G287900 Sobic002G121900--Sobic001G137800 Sobic002G121900--Sobic007G128200 Sobic002G121900--Sobic001G235100 Sobic002G121900--Sobic007G193300 Sobic002G121900--Sobic008G138200 Sobic003G374100 Sobic003G374100 Sobic002G121900--Sobic003G374100 Sobic001G171200 Sobic001G171200 Sobic002G121900--Sobic001G171200 Sobic006G228000 Sobic006G228000 Sobic001G137800--Sobic006G228000 Sobic001G137800--Sobic001G235200 Sobic001G137800--Sobic003G374100 Sobic001G137800--Sobic007G043000 Sobic001G137800--Sobic002G121900 Sobic001G137800--Sobic001G235100 Sobic001G137800--Sobic006G213900 Sobic001G137800--Sobic001G216400 Sobic001G137800--Sobic007G128200 Sobic006G213900--Sobic001G235200 Sobic002G239101 Sobic002G239101 Sobic006G213900--Sobic002G239101 Sobic006G134700 Sobic006G134700 Sobic006G213900--Sobic006G134700 Sobic002G159000 Sobic002G159000 Sobic006G213900--Sobic002G159000 Sobic004G168000 Sobic004G168000 Sobic006G213900--Sobic004G168000 Sobic005G070101 Sobic005G070101 Sobic006G213900--Sobic005G070101 Sobic006G213900--Sobic001G216400 Sobic009G075500 Sobic009G075500 Sobic006G213900--Sobic009G075500 Sobic006G213900--Sobic003G063700 Sobic001G235200--Sobic006G213900 Sobic001G235200--Sobic003G063700 Sobic001G235200--Sobic006G134700 Sobic001G235200--Sobic002G239101 Sobic001G235200--Sobic001G137800 Sobic001G235200--Sobic002G159000 Sobic001G235200--Sobic004G168000 Sobic001G235200--Sobic005G070101 Sobic009G211300 Sobic009G211300 Sobic001G235200--Sobic009G211300 Sobic003G063700--Sobic001G235200 Sobic003G063700--Sobic009G211300 Sobic003G063700--Sobic006G134700 Sobic003G063700--Sobic006G213900 Sobic001G158100 Sobic001G158100 Sobic003G063700--Sobic001G158100 Sobic003G063700--Sobic001G216400 Sobic003G063700--Sobic002G239101 Sobic003G063700--Sobic001G141900 Sobic003G063700--Sobic008G138200 Sobic001G216400--Sobic009G075500 Sobic004G234600 Sobic004G234600 Sobic001G216400--Sobic004G234600 Sobic009G063700 Sobic009G063700 Sobic001G216400--Sobic009G063700 Sobic005G166100 Sobic005G166100 Sobic001G216400--Sobic005G166100 Sobic001G419500 Sobic001G419500 Sobic001G216400--Sobic001G419500 Sobic001G216400--Sobic003G381100 Sobic001G216400--Sobic006G213900 Sobic001G216400--Sobic007G193300 Sobic001G216400--Sobic004G056000
Octagon: transcription factors


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