Gene annotation
Transcriptome id Sobic.006G097300.1
Synonym Sb06g018200, FBW2
Functional annotation F-box protein FBW2, putative, expressed
UniProt A0A1B6PL64
Pfam PF12937
Panther DB PTHR24006 PTHR24006:SF470
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G08980 : F-BOX WITH WD-40 2
RAP-DB (Rice) LOC_Os04g37590.1 : F-box protein FBW2, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ82868
Barley -
Wheat TraesCS2D02G314700 , TraesCS2B02G334900 , TraesCS2A02G316800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G381100 OsMADS21 - MADS-box family gene with MIKCc type-box, expressed -
2 Sobic.005G166100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
3 Sobic.004G234600 expressed protein -
4 Sobic.007G193300 OsMADS7 - MADS-box family gene with MIKCc type-box, expressed -
5 Sobic.001G171200 expressed protein -
6 Sobic.001G216400 nodulin, putative, expressed K07192: flotillin
7 Sobic.008G072900 OsMADS13 - MADS-box family gene with MIKCc type-box, expressed -
8 Sobic.007G128200 expressed protein -
9 Sobic.004G281000 MIKC-type MADS box transcription factors(PubMedID : 19749151)@OsMADS6 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
10 Sobic.004G056000 OsMADS29 - MADS-box family gene with MIKCc type-box, expressed -
11 Sobic.007G043000 transcription factor X1, putative, expressed -
12 Sobic.009G063700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
13 Sobic.002G121900 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
14 Sobic.009G075500 OsMADS58 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
15 Sobic.003G027200 plastocyanin-like domain containing protein, putative, expressed -
16 Sobic.001G158100 MBTB43 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
17 Sobic.003G022900 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
18 Sobic.001G086400 OsMADS34 - MADS-box family gene with MIKCc type-box, expressed -
19 Sobic.002G053350 - -
20 Sobic.001G457600 piwi domain containing protein, expressed -


Gene co-expression network
sample Sobic006G097300 Sobic006G097300 Sobic003G381100 Sobic003G381100 Sobic006G097300--Sobic003G381100 Sobic005G166100 Sobic005G166100 Sobic006G097300--Sobic005G166100 Sobic004G234600 Sobic004G234600 Sobic006G097300--Sobic004G234600 Sobic007G193300 Sobic007G193300 Sobic006G097300--Sobic007G193300 Sobic001G171200 Sobic001G171200 Sobic006G097300--Sobic001G171200 Sobic001G216400 Sobic001G216400 Sobic006G097300--Sobic001G216400 Sobic008G072900 Sobic008G072900 Sobic006G097300--Sobic008G072900 Sobic007G128200 Sobic007G128200 Sobic006G097300--Sobic007G128200 Sobic004G281000 Sobic004G281000 Sobic006G097300--Sobic004G281000 Sobic004G056000 Sobic004G056000 Sobic003G381100--Sobic004G056000 Sobic003G381100--Sobic001G216400 Sobic003G381100--Sobic008G072900 Sobic003G027200 Sobic003G027200 Sobic003G381100--Sobic003G027200 Sobic003G381100--Sobic006G097300 Sobic004G254100 Sobic004G254100 Sobic003G381100--Sobic004G254100 Sobic007G043000 Sobic007G043000 Sobic003G381100--Sobic007G043000 Sobic003G381100--Sobic005G166100 Sobic003G381100--Sobic007G193300 Sobic005G166100--Sobic001G216400 Sobic005G166100--Sobic004G056000 Sobic009G063700 Sobic009G063700 Sobic005G166100--Sobic009G063700 Sobic005G166100--Sobic007G128200 Sobic005G166100--Sobic003G381100 Sobic009G075500 Sobic009G075500 Sobic005G166100--Sobic009G075500 Sobic001G419500 Sobic001G419500 Sobic005G166100--Sobic001G419500 Sobic005G166100--Sobic007G193300 Sobic005G166100--Sobic006G097300 Sobic004G234600--Sobic007G128200 Sobic004G234600--Sobic001G216400 Sobic004G234600--Sobic009G063700 Sobic002G053350 Sobic002G053350 Sobic004G234600--Sobic002G053350 Sobic001G457600 Sobic001G457600 Sobic004G234600--Sobic001G457600 Sobic004G234600--Sobic001G419500 Sobic010G194600 Sobic010G194600 Sobic004G234600--Sobic010G194600 Sobic001G158100 Sobic001G158100 Sobic004G234600--Sobic001G158100 Sobic010G183800 Sobic010G183800 Sobic004G234600--Sobic010G183800 Sobic001G137500 Sobic001G137500 Sobic007G193300--Sobic001G137500 Sobic007G193300--Sobic001G216400 Sobic007G193300--Sobic001G419500 Sobic007G193300--Sobic005G166100 Sobic007G193300--Sobic003G381100 Sobic007G193300--Sobic007G128200 Sobic007G193300--Sobic004G234600 Sobic007G193300--Sobic001G457600 Sobic002G121900 Sobic002G121900 Sobic007G193300--Sobic002G121900 Sobic004G220200 Sobic004G220200 Sobic001G171200--Sobic004G220200 Sobic001G171200--Sobic006G097300 Sobic001G171200--Sobic007G128200 Sobic001G171200--Sobic004G234600 Sobic001G171200--Sobic002G121900 Sobic001G171200--Sobic007G193300 Sobic001G171200--Sobic010G194600 Sobic001G086400 Sobic001G086400 Sobic001G171200--Sobic001G086400 Sobic001G171200--Sobic001G457600 Sobic001G216400--Sobic009G075500 Sobic001G216400--Sobic004G234600 Sobic001G216400--Sobic009G063700 Sobic001G216400--Sobic005G166100 Sobic001G216400--Sobic001G419500 Sobic001G216400--Sobic003G381100 Sobic006G213900 Sobic006G213900 Sobic001G216400--Sobic006G213900 Sobic001G216400--Sobic007G193300 Sobic001G216400--Sobic004G056000 Sobic008G072900--Sobic003G027200 Sobic008G072900--Sobic003G381100 Sobic001G377600 Sobic001G377600 Sobic008G072900--Sobic001G377600 Sobic003G029900 Sobic003G029900 Sobic008G072900--Sobic003G029900 Sobic008G072900--Sobic006G097300 Sobic008G072900--Sobic007G193300 Sobic002G239000 Sobic002G239000 Sobic008G072900--Sobic002G239000 Sobic001G171100 Sobic001G171100 Sobic008G072900--Sobic001G171100 Sobic003G022900 Sobic003G022900 Sobic008G072900--Sobic003G022900 Sobic007G128200--Sobic004G234600 Sobic007G128200--Sobic009G063700 Sobic007G128200--Sobic010G194600 Sobic007G128200--Sobic001G216400 Sobic007G128200--Sobic001G158100 Sobic007G128200--Sobic001G457600 Sobic007G128200--Sobic004G056000 Sobic007G128200--Sobic005G166100 Sobic007G128200--Sobic007G043000 Sobic004G281000--Sobic010G183800 Sobic003G300000 Sobic003G300000 Sobic004G281000--Sobic003G300000 Sobic004G281000--Sobic009G075500 Sobic002G078900 Sobic002G078900 Sobic004G281000--Sobic002G078900 Sobic004G281000--Sobic004G234600 Sobic001G456000 Sobic001G456000 Sobic004G281000--Sobic001G456000 Sobic004G281000--Sobic001G457600 Sobic001G071600 Sobic001G071600 Sobic004G281000--Sobic001G071600 Sobic004G281000--Sobic001G216400
Octagon: transcription factors


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