Gene annotation
Transcriptome id Sobic.002G159000.3
Synonym Sb02g020280
Functional annotation 60S ribosomal protein L22-2, putative, expressed
UniProt A0A1W0W4E6
Pfam PF01776
Panther DB PTHR10064
NCBI CDD -
KEGG Orthology K02891; RP-L22e, large subunit ribosomal protein L22e
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0005622intracellular GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT3G05560 : Ribosomal L22e protein family
RAP-DB (Rice) LOC_Os03g22340.1 : 60S ribosomal protein L22-2, putative, expressed
MaizeGDB (Corn) Zm00025a049131
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G168000 pectinesterase inhibitor domain containing protein, putative, expressed -
2 Sobic.005G070101 - -
3 Sobic.002G239101 - -
4 Sobic.006G134700 endoglucanase, putative, expressed -
5 Sobic.006G213900 OsMADS31 - MADS-box family gene with MIKCc type-box, expressed -
6 Sobic.001G235200 MYB family transcription factor, putative, expressed -
7 Sobic.009G179000 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
8 Sobic.001G459400 B3 DNA binding domain containing protein, expressed -
9 Sobic.005G070700 - -
10 Sobic.009G075500 OsMADS58 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
11 Sobic.003G295100 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.001G459300 - -
13 Sobic.003G092300 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
14 Sobic.006G015100 expressed protein -
15 Sobic.006G163200 COBRA, putative, expressed -
16 Sobic.010G048600 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
17 Sobic.009G211300 MATH domain containing protein, expressed -
18 Sobic.009G063700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
19 Sobic.003G063700 - -
20 Sobic.001G158200 PLA IIIA/PLP7, putative, expressed -


Gene co-expression network
sample Sobic002G159000 Sobic002G159000 Sobic004G168000 Sobic004G168000 Sobic002G159000--Sobic004G168000 Sobic005G070101 Sobic005G070101 Sobic002G159000--Sobic005G070101 Sobic002G239101 Sobic002G239101 Sobic002G159000--Sobic002G239101 Sobic006G134700 Sobic006G134700 Sobic002G159000--Sobic006G134700 Sobic006G213900 Sobic006G213900 Sobic002G159000--Sobic006G213900 Sobic001G235200 Sobic001G235200 Sobic002G159000--Sobic001G235200 Sobic009G179000 Sobic009G179000 Sobic002G159000--Sobic009G179000 Sobic001G459400 Sobic001G459400 Sobic002G159000--Sobic001G459400 Sobic005G070700 Sobic005G070700 Sobic002G159000--Sobic005G070700 Sobic004G168000--Sobic004G168000 Sobic004G168000--Sobic002G159000 Sobic004G168000--Sobic002G239101 Sobic004G168000--Sobic006G134700 Sobic004G168000--Sobic006G213900 Sobic004G168000--Sobic001G235200 Sobic004G168000--Sobic009G179000 Sobic004G168000--Sobic001G459400 Sobic004G168000--Sobic005G070700 Sobic005G070101--Sobic004G168000 Sobic005G070101--Sobic002G159000 Sobic005G070101--Sobic002G239101 Sobic005G070101--Sobic006G134700 Sobic005G070101--Sobic006G213900 Sobic005G070101--Sobic001G235200 Sobic005G070101--Sobic009G179000 Sobic005G070101--Sobic001G459400 Sobic005G070101--Sobic005G070700 Sobic002G239101--Sobic002G159000 Sobic002G239101--Sobic004G168000 Sobic002G239101--Sobic005G070101 Sobic002G239101--Sobic006G134700 Sobic002G239101--Sobic006G213900 Sobic002G239101--Sobic001G235200 Sobic002G239101--Sobic001G459400 Sobic009G075500 Sobic009G075500 Sobic002G239101--Sobic009G075500 Sobic009G063700 Sobic009G063700 Sobic002G239101--Sobic009G063700 Sobic006G134700--Sobic002G239101 Sobic006G134700--Sobic005G070101 Sobic006G134700--Sobic004G168000 Sobic006G134700--Sobic002G159000 Sobic006G134700--Sobic001G235200 Sobic006G134700--Sobic006G213900 Sobic003G063700 Sobic003G063700 Sobic006G134700--Sobic003G063700 Sobic009G211300 Sobic009G211300 Sobic006G134700--Sobic009G211300 Sobic006G134700--Sobic001G459400 Sobic006G213900--Sobic001G235200 Sobic006G213900--Sobic002G239101 Sobic006G213900--Sobic006G134700 Sobic006G213900--Sobic002G159000 Sobic006G213900--Sobic004G168000 Sobic006G213900--Sobic005G070101 Sobic001G216400 Sobic001G216400 Sobic006G213900--Sobic001G216400 Sobic006G213900--Sobic009G075500 Sobic006G213900--Sobic003G063700 Sobic001G235200--Sobic006G213900 Sobic001G235200--Sobic003G063700 Sobic001G235200--Sobic006G134700 Sobic001G235200--Sobic002G239101 Sobic001G137800 Sobic001G137800 Sobic001G235200--Sobic001G137800 Sobic001G235200--Sobic002G159000 Sobic001G235200--Sobic004G168000 Sobic001G235200--Sobic005G070101 Sobic001G235200--Sobic009G211300 Sobic009G179000--Sobic002G159000 Sobic009G179000--Sobic004G168000 Sobic009G179000--Sobic005G070101 Sobic009G179000--Sobic006G213900 Sobic009G179000--Sobic002G239101 Sobic009G179000--Sobic006G134700 Sobic009G179000--Sobic001G235200 Sobic006G163200 Sobic006G163200 Sobic009G179000--Sobic006G163200 Sobic001G158200 Sobic001G158200 Sobic009G179000--Sobic001G158200 Sobic003G092300 Sobic003G092300 Sobic001G459400--Sobic003G092300 Sobic001G459300 Sobic001G459300 Sobic001G459400--Sobic001G459300 Sobic001G459400--Sobic005G070700 Sobic010G183800 Sobic010G183800 Sobic001G459400--Sobic010G183800 Sobic010G048600 Sobic010G048600 Sobic001G459400--Sobic010G048600 Sobic001G459400--Sobic009G075500 Sobic002G078900 Sobic002G078900 Sobic001G459400--Sobic002G078900 Sobic001G459400--Sobic009G063700 Sobic006G015100 Sobic006G015100 Sobic001G459400--Sobic006G015100 Sobic005G070700--Sobic001G459300 Sobic005G070700--Sobic010G048600 Sobic005G070700--Sobic001G459400 Sobic001G274300 Sobic001G274300 Sobic005G070700--Sobic001G274300 Sobic001G106500 Sobic001G106500 Sobic005G070700--Sobic001G106500 Sobic005G070700--Sobic003G092300 Sobic001G456000 Sobic001G456000 Sobic005G070700--Sobic001G456000 Sobic005G070700--Sobic005G070101 Sobic005G070700--Sobic004G168000
Octagon: transcription factors


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