Gene annotation
Transcriptome id Sobic.001G158200.1
Synonym PLP7, PLAIIIA, Sb01g013790
Functional annotation PLA IIIA/PLP7, putative, expressed
UniProt A0A1Z5S5S4
Pfam PF01734
Panther DB PTHR32241 PTHR32241:SF4
NCBI CDD KOG0513; Ca2+-independent phospholipase A2
KEGG Orthology -
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT3G54950 : patatin-like protein 6
RAP-DB (Rice) LOC_Os03g43880.1 : PLA IIIA/PLP7, putative, expressed
MaizeGDB (Corn) Zm00025a008446 , Zm00025a025353 , Zm00025a004671 , Zm00025a017276 , Zm00025a007305 , Zm00025a007304
Brachypodium KQK14014
Barley HORVU5Hr1G011400.10 , HORVU5Hr1G093250.4 , HORVU5Hr1G011400.1 , HORVU5Hr1G011400.5 , HORVU5Hr1G011400.7 , HORVU5Hr1G011400.6 , HORVU5Hr1G011400.9 , HORVU5Hr1G011400.8 , HORVU5Hr1G093250.5
Wheat TraesCS5D02G057600 , TraesCS5A02G047000 , TraesCS5B02G052000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G060700 expressed protein -
2 Sobic.005G070101 - -
3 Sobic.004G168000 pectinesterase inhibitor domain containing protein, putative, expressed -
4 Sobic.002G159000 60S ribosomal protein L22-2, putative, expressed K02891: RP-L22e, large subunit ribosomal protein L22e
5 Sobic.009G179000 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
6 Sobic.002G239101 - -
7 Sobic.006G134700 endoglucanase, putative, expressed -
8 Sobic.006G213900 OsMADS31 - MADS-box family gene with MIKCc type-box, expressed -
9 Sobic.010G048600 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
10 Sobic.005G070700 - -
11 Sobic.001G235200 MYB family transcription factor, putative, expressed -
12 Sobic.001G459400 B3 DNA binding domain containing protein, expressed -
13 Sobic.001G459300 - -
14 Sobic.009G075500 OsMADS58 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
15 Sobic.002G237000 fasciclin domain containing protein, expressed -
16 Sobic.003G092300 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
17 Sobic.006G163200 COBRA, putative, expressed -
18 Sobic.006G015100 expressed protein -
19 Sobic.001G157700 PLA IIIA/PLP7, putative, expressed -
20 Sobic.001G274300 GASR1 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, putative -


Gene co-expression network
sample Sobic001G158200 Sobic001G158200 Sobic003G060700 Sobic003G060700 Sobic001G158200--Sobic003G060700 Sobic005G070101 Sobic005G070101 Sobic001G158200--Sobic005G070101 Sobic004G168000 Sobic004G168000 Sobic001G158200--Sobic004G168000 Sobic002G159000 Sobic002G159000 Sobic001G158200--Sobic002G159000 Sobic009G179000 Sobic009G179000 Sobic001G158200--Sobic009G179000 Sobic002G239101 Sobic002G239101 Sobic001G158200--Sobic002G239101 Sobic006G134700 Sobic006G134700 Sobic001G158200--Sobic006G134700 Sobic006G213900 Sobic006G213900 Sobic001G158200--Sobic006G213900 Sobic010G048600 Sobic010G048600 Sobic001G158200--Sobic010G048600 Sobic003G060700--Sobic001G158200 Sobic003G060700--Sobic009G179000 Sobic003G060700--Sobic002G159000 Sobic003G060700--Sobic004G168000 Sobic003G060700--Sobic005G070101 Sobic003G060700--Sobic002G239101 Sobic003G060700--Sobic006G134700 Sobic003G060700--Sobic006G213900 Sobic001G235200 Sobic001G235200 Sobic003G060700--Sobic001G235200 Sobic005G070101--Sobic004G168000 Sobic005G070101--Sobic002G159000 Sobic005G070101--Sobic002G239101 Sobic005G070101--Sobic006G134700 Sobic005G070101--Sobic006G213900 Sobic005G070101--Sobic001G235200 Sobic005G070101--Sobic009G179000 Sobic001G459400 Sobic001G459400 Sobic005G070101--Sobic001G459400 Sobic005G070700 Sobic005G070700 Sobic005G070101--Sobic005G070700 Sobic004G168000--Sobic004G168000 Sobic004G168000--Sobic002G159000 Sobic004G168000--Sobic002G239101 Sobic004G168000--Sobic006G134700 Sobic004G168000--Sobic006G213900 Sobic004G168000--Sobic001G235200 Sobic004G168000--Sobic009G179000 Sobic004G168000--Sobic001G459400 Sobic004G168000--Sobic005G070700 Sobic002G159000--Sobic004G168000 Sobic002G159000--Sobic005G070101 Sobic002G159000--Sobic002G239101 Sobic002G159000--Sobic006G134700 Sobic002G159000--Sobic006G213900 Sobic002G159000--Sobic001G235200 Sobic002G159000--Sobic009G179000 Sobic002G159000--Sobic001G459400 Sobic002G159000--Sobic005G070700 Sobic009G179000--Sobic002G159000 Sobic009G179000--Sobic004G168000 Sobic009G179000--Sobic005G070101 Sobic009G179000--Sobic006G213900 Sobic009G179000--Sobic002G239101 Sobic009G179000--Sobic006G134700 Sobic009G179000--Sobic001G235200 Sobic006G163200 Sobic006G163200 Sobic009G179000--Sobic006G163200 Sobic009G179000--Sobic001G158200 Sobic002G239101--Sobic002G159000 Sobic002G239101--Sobic004G168000 Sobic002G239101--Sobic005G070101 Sobic002G239101--Sobic006G134700 Sobic002G239101--Sobic006G213900 Sobic002G239101--Sobic001G235200 Sobic002G239101--Sobic001G459400 Sobic009G075500 Sobic009G075500 Sobic002G239101--Sobic009G075500 Sobic009G063700 Sobic009G063700 Sobic002G239101--Sobic009G063700 Sobic006G134700--Sobic002G239101 Sobic006G134700--Sobic005G070101 Sobic006G134700--Sobic004G168000 Sobic006G134700--Sobic002G159000 Sobic006G134700--Sobic001G235200 Sobic006G134700--Sobic006G213900 Sobic003G063700 Sobic003G063700 Sobic006G134700--Sobic003G063700 Sobic009G211300 Sobic009G211300 Sobic006G134700--Sobic009G211300 Sobic006G134700--Sobic001G459400 Sobic006G213900--Sobic001G235200 Sobic006G213900--Sobic002G239101 Sobic006G213900--Sobic006G134700 Sobic006G213900--Sobic002G159000 Sobic006G213900--Sobic004G168000 Sobic006G213900--Sobic005G070101 Sobic001G216400 Sobic001G216400 Sobic006G213900--Sobic001G216400 Sobic006G213900--Sobic009G075500 Sobic006G213900--Sobic003G063700 Sobic001G459300 Sobic001G459300 Sobic010G048600--Sobic001G459300 Sobic010G048600--Sobic005G070700 Sobic010G048600--Sobic001G459400 Sobic001G106500 Sobic001G106500 Sobic010G048600--Sobic001G106500 Sobic001G274300 Sobic001G274300 Sobic010G048600--Sobic001G274300 Sobic001G456000 Sobic001G456000 Sobic010G048600--Sobic001G456000 Sobic003G092300 Sobic003G092300 Sobic010G048600--Sobic003G092300 Sobic002G078900 Sobic002G078900 Sobic010G048600--Sobic002G078900 Sobic010G183800 Sobic010G183800 Sobic010G048600--Sobic010G183800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.