Gene annotation
Transcriptome id Sobic.001G157700.1
Synonym Sb01g013740, PLAIIIA, PLP7
Functional annotation PLA IIIA/PLP7, putative, expressed
UniProt C5WR89
Pfam PF01734
Panther DB PTHR32241 PTHR32241:SF4
NCBI CDD KOG0513; Ca2+-independent phospholipase A2
KEGG Orthology -
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT3G54950 : patatin-like protein 6
RAP-DB (Rice) LOC_Os03g43880.1 : PLA IIIA/PLP7, putative, expressed
MaizeGDB (Corn) Zm00025a017276 , Zm00025a007305 , Zm00025a007304 , Zm00025a001621
Brachypodium KQK14014 , KQK17127
Barley HORVU5Hr1G011400.10 , HORVU5Hr1G093250.4 , HORVU5Hr1G011400.1 , HORVU5Hr1G011400.3 , HORVU5Hr1G011400.5 , HORVU5Hr1G011400.4 , HORVU5Hr1G011400.7 , HORVU5Hr1G011400.6 , HORVU5Hr1G011400.9 , HORVU5Hr1G011400.8 , HORVU5Hr1G093250.5
Wheat TraesCS5D02G057600 , TraesCS5A02G047000 , TraesCS5B02G052000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G031900 expansin precursor, putative, expressed -
2 Sobic.001G158200 PLA IIIA/PLP7, putative, expressed -
3 Sobic.004G070900 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.002G343600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@-(PubMedID : 23108465)@polygalacturonase inhibitor 1 precursor, putative, expressed -
5 Sobic.009G048100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lipase, putative, expressed -
6 Sobic.002G178800 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
7 Sobic.010G048600 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
8 Sobic.005G070700 - -
9 Sobic.005G070101 - -
10 Sobic.004G168000 pectinesterase inhibitor domain containing protein, putative, expressed -
11 Sobic.002G159000 60S ribosomal protein L22-2, putative, expressed K02891: RP-L22e, large subunit ribosomal protein L22e
12 Sobic.001G515800 no apical meristem protein, putative, expressed -
13 Sobic.001G459300 - -
14 Sobic.002G239101 - -
15 Sobic.002G271000 BAP2, putative, expressed -
16 Sobic.004G229200 phosphate-induced protein 1 conserved region domain containing protein, expressed -
17 Sobic.001G459400 B3 DNA binding domain containing protein, expressed -
18 Sobic.003G316601 - -
19 Sobic.006G170100 AP2 domain containing protein, expressed -
20 Sobic.009G075500 OsMADS58 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant


Gene co-expression network
sample Sobic001G157700 Sobic001G157700 Sobic006G031900 Sobic006G031900 Sobic001G157700--Sobic006G031900 Sobic001G158200 Sobic001G158200 Sobic001G157700--Sobic001G158200 Sobic004G070900 Sobic004G070900 Sobic001G157700--Sobic004G070900 Sobic002G343600 Sobic002G343600 Sobic001G157700--Sobic002G343600 Sobic009G048100 Sobic009G048100 Sobic001G157700--Sobic009G048100 Sobic002G178800 Sobic002G178800 Sobic001G157700--Sobic002G178800 Sobic010G048600 Sobic010G048600 Sobic001G157700--Sobic010G048600 Sobic005G070700 Sobic005G070700 Sobic001G157700--Sobic005G070700 Sobic005G070101 Sobic005G070101 Sobic001G157700--Sobic005G070101 Sobic006G031900--Sobic002G343600 Sobic004G086500 Sobic004G086500 Sobic006G031900--Sobic004G086500 Sobic004G277700 Sobic004G277700 Sobic006G031900--Sobic004G277700 Sobic006G031900--Sobic001G157700 Sobic006G031900--Sobic002G178800 Sobic006G031900--Sobic010G048600 Sobic006G031900--Sobic005G070700 Sobic001G274300 Sobic001G274300 Sobic006G031900--Sobic001G274300 Sobic001G459300 Sobic001G459300 Sobic006G031900--Sobic001G459300 Sobic003G060700 Sobic003G060700 Sobic001G158200--Sobic003G060700 Sobic001G158200--Sobic005G070101 Sobic004G168000 Sobic004G168000 Sobic001G158200--Sobic004G168000 Sobic002G159000 Sobic002G159000 Sobic001G158200--Sobic002G159000 Sobic009G179000 Sobic009G179000 Sobic001G158200--Sobic009G179000 Sobic002G239101 Sobic002G239101 Sobic001G158200--Sobic002G239101 Sobic006G134700 Sobic006G134700 Sobic001G158200--Sobic006G134700 Sobic006G213900 Sobic006G213900 Sobic001G158200--Sobic006G213900 Sobic001G158200--Sobic010G048600 Sobic007G017700 Sobic007G017700 Sobic004G070900--Sobic007G017700 Sobic004G070900--Sobic001G157700 Sobic007G129300 Sobic007G129300 Sobic004G070900--Sobic007G129300 Sobic002G289800 Sobic002G289800 Sobic004G070900--Sobic002G289800 Sobic004G070900--Sobic002G343600 Sobic009G120700 Sobic009G120700 Sobic004G070900--Sobic009G120700 Sobic010G202100 Sobic010G202100 Sobic004G070900--Sobic010G202100 Sobic001G300400 Sobic001G300400 Sobic004G070900--Sobic001G300400 Sobic006G081800 Sobic006G081800 Sobic004G070900--Sobic006G081800 Sobic006G076000 Sobic006G076000 Sobic002G343600--Sobic006G076000 Sobic002G343600--Sobic004G086500 Sobic002G343600--Sobic004G277700 Sobic002G343600--Sobic006G031900 Sobic009G059800 Sobic009G059800 Sobic002G343600--Sobic009G059800 Sobic002G343600--Sobic010G048600 Sobic001G456000 Sobic001G456000 Sobic002G343600--Sobic001G456000 Sobic007G218400 Sobic007G218400 Sobic002G343600--Sobic007G218400 Sobic009G059932 Sobic009G059932 Sobic002G343600--Sobic009G059932 Sobic009G048100--Sobic001G158200 Sobic002G237000 Sobic002G237000 Sobic009G048100--Sobic002G237000 Sobic010G230000 Sobic010G230000 Sobic009G048100--Sobic010G230000 Sobic009G048100--Sobic002G178800 Sobic003G044800 Sobic003G044800 Sobic009G048100--Sobic003G044800 Sobic002G128000 Sobic002G128000 Sobic009G048100--Sobic002G128000 Sobic009G048100--Sobic006G031900 Sobic009G048100--Sobic001G157700 Sobic009G048100--Sobic002G239101 Sobic002G078900 Sobic002G078900 Sobic002G178800--Sobic002G078900 Sobic002G178800--Sobic010G048600 Sobic001G459400 Sobic001G459400 Sobic002G178800--Sobic001G459400 Sobic002G178700 Sobic002G178700 Sobic002G178800--Sobic002G178700 Sobic002G178800--Sobic001G459300 Sobic001G106500 Sobic001G106500 Sobic002G178800--Sobic001G106500 Sobic003G092300 Sobic003G092300 Sobic002G178800--Sobic003G092300 Sobic003G006000 Sobic003G006000 Sobic002G178800--Sobic003G006000 Sobic002G178800--Sobic001G456000 Sobic010G048600--Sobic001G459300 Sobic010G048600--Sobic005G070700 Sobic010G048600--Sobic001G459400 Sobic010G048600--Sobic001G106500 Sobic010G048600--Sobic001G274300 Sobic010G048600--Sobic001G456000 Sobic010G048600--Sobic003G092300 Sobic010G048600--Sobic002G078900 Sobic010G183800 Sobic010G183800 Sobic010G048600--Sobic010G183800 Sobic005G070700--Sobic001G459300 Sobic005G070700--Sobic010G048600 Sobic005G070700--Sobic001G459400 Sobic005G070700--Sobic001G274300 Sobic005G070700--Sobic001G106500 Sobic005G070700--Sobic003G092300 Sobic005G070700--Sobic001G456000 Sobic005G070700--Sobic005G070101 Sobic005G070700--Sobic004G168000 Sobic005G070101--Sobic004G168000 Sobic005G070101--Sobic002G159000 Sobic005G070101--Sobic002G239101 Sobic005G070101--Sobic006G134700 Sobic005G070101--Sobic006G213900 Sobic001G235200 Sobic001G235200 Sobic005G070101--Sobic001G235200 Sobic005G070101--Sobic009G179000 Sobic005G070101--Sobic001G459400 Sobic005G070101--Sobic005G070700
Octagon: transcription factors


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