Gene annotation
Transcriptome id Sobic.003G295100.1
Synonym Sb03g034560
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt C5XK32
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF156
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT5G45670 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os01g54470.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a023901 , Zm00025a043728 , Zm00025a040227 , Zm00025a019369 , Zm00025a027717 , Zm00025a040233 , Zm00025a044243 , Zm00025a027575
Brachypodium KQK09725 , KQK05361 , KQK09563 , KQK06198 , KQK02803
Barley HORVU3Hr1G069070.1 , HORVU3Hr1G069070.3 , HORVU3Hr1G069070.2 , HORVU3Hr1G069070.5 , HORVU3Hr1G069070.4 , HORVU3Hr1G069070.6 , HORVU3Hr1G071400.9 , HORVU3Hr1G071400.8 , HORVU3Hr1G071400.5 , HORVU3Hr1G071400.4 , HORVU3Hr1G071400.7 , HORVU3Hr1G071400.6 , HORVU3Hr1G071400.1 , HORVU3Hr1G071400.3 , HORVU3Hr1G071400.2 , HORVU1Hr1G064020.4 , HORVU1Hr1G064020.3 , HORVU3Hr1G071400.24 , HORVU3Hr1G071400.25 , HORVU3Hr1G071400.26 , HORVU3Hr1G071400.27 , HORVU3Hr1G071400.20 , HORVU3Hr1G071400.21 , HORVU3Hr1G071400.22 , HORVU3Hr1G071400.23 , HORVU3Hr1G015710.1 , HORVU1Hr1G064020.5 , HORVU1Hr1G064020.2 , HORVU1Hr1G064020.1 , HORVU3Hr1G071400.19 , HORVU3Hr1G071400.18 , HORVU3Hr1G071400.11 , HORVU3Hr1G071400.10 , HORVU3Hr1G071400.13 , HORVU3Hr1G071400.12 , HORVU3Hr1G071400.15 , HORVU3Hr1G071400.14 , HORVU3Hr1G071400.17 , HORVU3Hr1G071400.16 , HORVU1Hr1G076300.1 , HORVU1Hr1G076300.3 , HORVU1Hr1G076300.2 , HORVU1Hr1G076300.5 , HORVU1Hr1G076300.4
Wheat TraesCS3D02G283300 , TraesCS6D02G206800 , TraesCS6D02G206800 , TraesCS1A02G262900 , TraesCS3A02G283400 , TraesCS3B02G317000 , TraesCS3B02G306600 , TraesCS1D02G262900 , TraesCS1A02G339400 , TraesCS3D02G272400 , TraesCS3A02G273000 , TraesCS1B02G351700 , TraesCS1B02G273500 , TraesCS3D02G272400 , TraesCS1D02G341200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G239101 - -
2 Sobic.002G159000 60S ribosomal protein L22-2, putative, expressed K02891: RP-L22e, large subunit ribosomal protein L22e
3 Sobic.004G168000 pectinesterase inhibitor domain containing protein, putative, expressed -
4 Sobic.005G070101 - -
5 Sobic.001G235200 MYB family transcription factor, putative, expressed -
6 Sobic.006G213900 OsMADS31 - MADS-box family gene with MIKCc type-box, expressed -
7 Sobic.006G134700 endoglucanase, putative, expressed -
8 Sobic.003G374100 beta-galactosidase precursor, putative, expressed -
9 Sobic.001G463301 - -
10 Sobic.003G129200 argonaute, putative, expressed -
11 Sobic.009G179000 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
12 Sobic.001G137800 ankyrin, putative, expressed -
13 Sobic.001G271600 transferase family protein, putative, expressed -
14 Sobic.009G075500 OsMADS58 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
15 Sobic.006G163200 COBRA, putative, expressed -
16 Sobic.006G228000 glycine-rich protein 2, putative -
17 Sobic.001G459400 B3 DNA binding domain containing protein, expressed -
18 Sobic.003G092300 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
19 Sobic.009G063700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
20 Sobic.003G063700 - -


Gene co-expression network
sample Sobic003G295100 Sobic003G295100 Sobic002G239101 Sobic002G239101 Sobic003G295100--Sobic002G239101 Sobic002G159000 Sobic002G159000 Sobic003G295100--Sobic002G159000 Sobic004G168000 Sobic004G168000 Sobic003G295100--Sobic004G168000 Sobic005G070101 Sobic005G070101 Sobic003G295100--Sobic005G070101 Sobic001G235200 Sobic001G235200 Sobic003G295100--Sobic001G235200 Sobic006G213900 Sobic006G213900 Sobic003G295100--Sobic006G213900 Sobic006G134700 Sobic006G134700 Sobic003G295100--Sobic006G134700 Sobic003G374100 Sobic003G374100 Sobic003G295100--Sobic003G374100 Sobic001G463301 Sobic001G463301 Sobic003G295100--Sobic001G463301 Sobic002G239101--Sobic002G159000 Sobic002G239101--Sobic004G168000 Sobic002G239101--Sobic005G070101 Sobic002G239101--Sobic006G134700 Sobic002G239101--Sobic006G213900 Sobic002G239101--Sobic001G235200 Sobic001G459400 Sobic001G459400 Sobic002G239101--Sobic001G459400 Sobic009G075500 Sobic009G075500 Sobic002G239101--Sobic009G075500 Sobic009G063700 Sobic009G063700 Sobic002G239101--Sobic009G063700 Sobic002G159000--Sobic004G168000 Sobic002G159000--Sobic005G070101 Sobic002G159000--Sobic002G239101 Sobic002G159000--Sobic006G134700 Sobic002G159000--Sobic006G213900 Sobic002G159000--Sobic001G235200 Sobic009G179000 Sobic009G179000 Sobic002G159000--Sobic009G179000 Sobic002G159000--Sobic001G459400 Sobic005G070700 Sobic005G070700 Sobic002G159000--Sobic005G070700 Sobic004G168000--Sobic004G168000 Sobic004G168000--Sobic002G159000 Sobic004G168000--Sobic002G239101 Sobic004G168000--Sobic006G134700 Sobic004G168000--Sobic006G213900 Sobic004G168000--Sobic001G235200 Sobic004G168000--Sobic009G179000 Sobic004G168000--Sobic001G459400 Sobic004G168000--Sobic005G070700 Sobic005G070101--Sobic004G168000 Sobic005G070101--Sobic002G159000 Sobic005G070101--Sobic002G239101 Sobic005G070101--Sobic006G134700 Sobic005G070101--Sobic006G213900 Sobic005G070101--Sobic001G235200 Sobic005G070101--Sobic009G179000 Sobic005G070101--Sobic001G459400 Sobic005G070101--Sobic005G070700 Sobic001G235200--Sobic006G213900 Sobic003G063700 Sobic003G063700 Sobic001G235200--Sobic003G063700 Sobic001G235200--Sobic006G134700 Sobic001G235200--Sobic002G239101 Sobic001G137800 Sobic001G137800 Sobic001G235200--Sobic001G137800 Sobic001G235200--Sobic002G159000 Sobic001G235200--Sobic004G168000 Sobic001G235200--Sobic005G070101 Sobic009G211300 Sobic009G211300 Sobic001G235200--Sobic009G211300 Sobic006G213900--Sobic001G235200 Sobic006G213900--Sobic002G239101 Sobic006G213900--Sobic006G134700 Sobic006G213900--Sobic002G159000 Sobic006G213900--Sobic004G168000 Sobic006G213900--Sobic005G070101 Sobic001G216400 Sobic001G216400 Sobic006G213900--Sobic001G216400 Sobic006G213900--Sobic009G075500 Sobic006G213900--Sobic003G063700 Sobic006G134700--Sobic002G239101 Sobic006G134700--Sobic005G070101 Sobic006G134700--Sobic004G168000 Sobic006G134700--Sobic002G159000 Sobic006G134700--Sobic001G235200 Sobic006G134700--Sobic006G213900 Sobic006G134700--Sobic003G063700 Sobic006G134700--Sobic009G211300 Sobic006G134700--Sobic001G459400 Sobic003G374100--Sobic001G137800 Sobic006G228000 Sobic006G228000 Sobic003G374100--Sobic006G228000 Sobic003G129200 Sobic003G129200 Sobic003G374100--Sobic003G129200 Sobic007G043000 Sobic007G043000 Sobic003G374100--Sobic007G043000 Sobic002G121900 Sobic002G121900 Sobic003G374100--Sobic002G121900 Sobic004G234600 Sobic004G234600 Sobic003G374100--Sobic004G234600 Sobic002G053350 Sobic002G053350 Sobic003G374100--Sobic002G053350 Sobic003G374100--Sobic001G235200 Sobic001G235100 Sobic001G235100 Sobic003G374100--Sobic001G235100 Sobic003G300000 Sobic003G300000 Sobic001G463301--Sobic003G300000 Sobic010G183800 Sobic010G183800 Sobic001G463301--Sobic010G183800 Sobic003G092300 Sobic003G092300 Sobic001G463301--Sobic003G092300 Sobic001G463301--Sobic009G063700 Sobic001G463301--Sobic001G459400 Sobic001G158100 Sobic001G158100 Sobic001G463301--Sobic001G158100 Sobic001G463301--Sobic009G075500 Sobic002G078900 Sobic002G078900 Sobic001G463301--Sobic002G078900 Sobic001G463301--Sobic004G234600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.