Gene annotation
Transcriptome id Sobic.001G463301.1
Synonym -
Functional annotation -
UniProt A0A1Z5SAT0
Pfam PF04535
Panther DB PTHR32021 PTHR32021:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G28370 : Uncharacterised protein family (UPF0497)
RAP-DB (Rice) LOC_Os03g10870.1 : membrane associated DUF588 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a001115
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G300000 expressed protein -
2 Sobic.010G183800 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
3 Sobic.003G092300 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
4 Sobic.009G063700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
5 Sobic.001G459400 B3 DNA binding domain containing protein, expressed -
6 Sobic.001G158100 MBTB43 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
7 Sobic.009G075500 OsMADS58 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
8 Sobic.002G078900 agenet domain containing protein, expressed -
9 Sobic.004G234600 expressed protein -
10 Sobic.006G271600 RNA recognition motif containing protein, putative, expressed K13126: polyadenylate-binding protein
11 Sobic.003G191600 expressed protein -
12 Sobic.005G166100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
13 Sobic.001G456000 YABBY domain containing protein, putative, expressed -
14 Sobic.003G117200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed -
15 Sobic.003G207000 expressed protein -
16 Sobic.003G295100 GDSL-like lipase/acylhydrolase, putative, expressed -
17 Sobic.001G106500 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
18 Sobic.004G056000 OsMADS29 - MADS-box family gene with MIKCc type-box, expressed -
19 Sobic.002G239101 - -
20 Sobic.003G046400 transcriptional corepressor LEUNIG, putative, expressed -


Gene co-expression network
sample Sobic001G463301 Sobic001G463301 Sobic003G300000 Sobic003G300000 Sobic001G463301--Sobic003G300000 Sobic010G183800 Sobic010G183800 Sobic001G463301--Sobic010G183800 Sobic003G092300 Sobic003G092300 Sobic001G463301--Sobic003G092300 Sobic009G063700 Sobic009G063700 Sobic001G463301--Sobic009G063700 Sobic001G459400 Sobic001G459400 Sobic001G463301--Sobic001G459400 Sobic001G158100 Sobic001G158100 Sobic001G463301--Sobic001G158100 Sobic009G075500 Sobic009G075500 Sobic001G463301--Sobic009G075500 Sobic002G078900 Sobic002G078900 Sobic001G463301--Sobic002G078900 Sobic004G234600 Sobic004G234600 Sobic001G463301--Sobic004G234600 Sobic003G300000--Sobic010G183800 Sobic003G300000--Sobic001G459400 Sobic003G300000--Sobic003G092300 Sobic003G300000--Sobic002G078900 Sobic003G300000--Sobic009G063700 Sobic003G300000--Sobic009G075500 Sobic006G271600 Sobic006G271600 Sobic003G300000--Sobic006G271600 Sobic004G281000 Sobic004G281000 Sobic003G300000--Sobic004G281000 Sobic001G419500 Sobic001G419500 Sobic003G300000--Sobic001G419500 Sobic010G183800--Sobic003G092300 Sobic010G183800--Sobic001G459400 Sobic010G183800--Sobic002G078900 Sobic010G183800--Sobic003G300000 Sobic001G456000 Sobic001G456000 Sobic010G183800--Sobic001G456000 Sobic010G183800--Sobic009G063700 Sobic001G071600 Sobic001G071600 Sobic010G183800--Sobic001G071600 Sobic010G183800--Sobic001G158100 Sobic001G106500 Sobic001G106500 Sobic010G183800--Sobic001G106500 Sobic003G092300--Sobic001G459400 Sobic003G092300--Sobic010G183800 Sobic001G459300 Sobic001G459300 Sobic003G092300--Sobic001G459300 Sobic003G092300--Sobic001G106500 Sobic003G092300--Sobic003G300000 Sobic010G048600 Sobic010G048600 Sobic003G092300--Sobic010G048600 Sobic003G092300--Sobic009G075500 Sobic003G092300--Sobic001G158100 Sobic005G070700 Sobic005G070700 Sobic003G092300--Sobic005G070700 Sobic009G063700--Sobic001G158100 Sobic004G056000 Sobic004G056000 Sobic009G063700--Sobic004G056000 Sobic009G063700--Sobic001G459400 Sobic009G063700--Sobic009G075500 Sobic007G128200 Sobic007G128200 Sobic009G063700--Sobic007G128200 Sobic009G063700--Sobic010G183800 Sobic001G216400 Sobic001G216400 Sobic009G063700--Sobic001G216400 Sobic009G063700--Sobic004G234600 Sobic009G063700--Sobic001G419500 Sobic001G459400--Sobic003G092300 Sobic001G459400--Sobic001G459300 Sobic001G459400--Sobic005G070700 Sobic001G459400--Sobic010G183800 Sobic001G459400--Sobic010G048600 Sobic001G459400--Sobic009G075500 Sobic001G459400--Sobic002G078900 Sobic001G459400--Sobic009G063700 Sobic006G015100 Sobic006G015100 Sobic001G459400--Sobic006G015100 Sobic001G158100--Sobic009G063700 Sobic009G211300 Sobic009G211300 Sobic001G158100--Sobic009G211300 Sobic001G158100--Sobic001G459400 Sobic001G158100--Sobic004G056000 Sobic001G158100--Sobic003G092300 Sobic001G158100--Sobic010G183800 Sobic001G158100--Sobic009G075500 Sobic001G158100--Sobic007G128200 Sobic001G158100--Sobic001G216400 Sobic009G075500--Sobic001G459400 Sobic009G075500--Sobic001G216400 Sobic009G075500--Sobic009G063700 Sobic009G075500--Sobic003G092300 Sobic002G239101 Sobic002G239101 Sobic009G075500--Sobic002G239101 Sobic006G213900 Sobic006G213900 Sobic009G075500--Sobic006G213900 Sobic009G075500--Sobic001G158100 Sobic009G075500--Sobic003G300000 Sobic009G075500--Sobic004G056000 Sobic002G078900--Sobic001G456000 Sobic002G078900--Sobic010G183800 Sobic002G078900--Sobic001G459400 Sobic002G078900--Sobic003G300000 Sobic002G078900--Sobic001G106500 Sobic002G078900--Sobic001G071600 Sobic002G078900--Sobic001G459300 Sobic002G078900--Sobic003G092300 Sobic009G243000 Sobic009G243000 Sobic002G078900--Sobic009G243000 Sobic004G234600--Sobic007G128200 Sobic004G234600--Sobic001G216400 Sobic004G234600--Sobic009G063700 Sobic002G053350 Sobic002G053350 Sobic004G234600--Sobic002G053350 Sobic001G457600 Sobic001G457600 Sobic004G234600--Sobic001G457600 Sobic004G234600--Sobic001G419500 Sobic010G194600 Sobic010G194600 Sobic004G234600--Sobic010G194600 Sobic004G234600--Sobic001G158100 Sobic004G234600--Sobic010G183800
Octagon: transcription factors


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