Gene annotation
Transcriptome id Sobic.003G300000.1,Sobic.003G300000.2
Synonym Sb03g034940
Functional annotation expressed protein
UniProt A0A1W0VZL8 , A0A1B6Q654
Pfam -
Panther DB PTHR35120 PTHR35120:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G42370 : -
RAP-DB (Rice) LOC_Os01g55120.1 : expressed protein
MaizeGDB (Corn) Zm00025a027528
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G183800 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
2 Sobic.001G459400 B3 DNA binding domain containing protein, expressed -
3 Sobic.003G092300 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
4 Sobic.002G078900 agenet domain containing protein, expressed -
5 Sobic.009G063700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
6 Sobic.009G075500 OsMADS58 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
7 Sobic.006G271600 RNA recognition motif containing protein, putative, expressed K13126: polyadenylate-binding protein
8 Sobic.004G281000 MIKC-type MADS box transcription factors(PubMedID : 19749151)@OsMADS6 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
9 Sobic.001G419500 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
10 Sobic.001G463301 - -
11 Sobic.006G015100 expressed protein -
12 Sobic.004G234600 expressed protein -
13 Sobic.001G158100 MBTB43 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
14 Sobic.009G048300 transcription factor X1, putative, expressed -
15 Sobic.001G071600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
16 Sobic.001G456000 YABBY domain containing protein, putative, expressed -
17 Sobic.003G117200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed -
18 Sobic.001G106500 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
19 Sobic.001G216400 nodulin, putative, expressed K07192: flotillin
20 Sobic.010G194600 CW-type Zinc Finger, putative, expressed -


Gene co-expression network
sample Sobic003G300000 Sobic003G300000 Sobic010G183800 Sobic010G183800 Sobic003G300000--Sobic010G183800 Sobic001G459400 Sobic001G459400 Sobic003G300000--Sobic001G459400 Sobic003G092300 Sobic003G092300 Sobic003G300000--Sobic003G092300 Sobic002G078900 Sobic002G078900 Sobic003G300000--Sobic002G078900 Sobic009G063700 Sobic009G063700 Sobic003G300000--Sobic009G063700 Sobic009G075500 Sobic009G075500 Sobic003G300000--Sobic009G075500 Sobic006G271600 Sobic006G271600 Sobic003G300000--Sobic006G271600 Sobic004G281000 Sobic004G281000 Sobic003G300000--Sobic004G281000 Sobic001G419500 Sobic001G419500 Sobic003G300000--Sobic001G419500 Sobic010G183800--Sobic003G092300 Sobic010G183800--Sobic001G459400 Sobic010G183800--Sobic002G078900 Sobic010G183800--Sobic003G300000 Sobic001G456000 Sobic001G456000 Sobic010G183800--Sobic001G456000 Sobic010G183800--Sobic009G063700 Sobic001G071600 Sobic001G071600 Sobic010G183800--Sobic001G071600 Sobic001G158100 Sobic001G158100 Sobic010G183800--Sobic001G158100 Sobic001G106500 Sobic001G106500 Sobic010G183800--Sobic001G106500 Sobic001G459400--Sobic003G092300 Sobic001G459300 Sobic001G459300 Sobic001G459400--Sobic001G459300 Sobic005G070700 Sobic005G070700 Sobic001G459400--Sobic005G070700 Sobic001G459400--Sobic010G183800 Sobic010G048600 Sobic010G048600 Sobic001G459400--Sobic010G048600 Sobic001G459400--Sobic009G075500 Sobic001G459400--Sobic002G078900 Sobic001G459400--Sobic009G063700 Sobic006G015100 Sobic006G015100 Sobic001G459400--Sobic006G015100 Sobic003G092300--Sobic001G459400 Sobic003G092300--Sobic010G183800 Sobic003G092300--Sobic001G459300 Sobic003G092300--Sobic001G106500 Sobic003G092300--Sobic003G300000 Sobic003G092300--Sobic010G048600 Sobic003G092300--Sobic009G075500 Sobic003G092300--Sobic001G158100 Sobic003G092300--Sobic005G070700 Sobic002G078900--Sobic001G456000 Sobic002G078900--Sobic010G183800 Sobic002G078900--Sobic001G459400 Sobic002G078900--Sobic003G300000 Sobic002G078900--Sobic001G106500 Sobic002G078900--Sobic001G071600 Sobic002G078900--Sobic001G459300 Sobic002G078900--Sobic003G092300 Sobic009G243000 Sobic009G243000 Sobic002G078900--Sobic009G243000 Sobic009G063700--Sobic001G158100 Sobic004G056000 Sobic004G056000 Sobic009G063700--Sobic004G056000 Sobic009G063700--Sobic001G459400 Sobic009G063700--Sobic009G075500 Sobic007G128200 Sobic007G128200 Sobic009G063700--Sobic007G128200 Sobic009G063700--Sobic010G183800 Sobic001G216400 Sobic001G216400 Sobic009G063700--Sobic001G216400 Sobic004G234600 Sobic004G234600 Sobic009G063700--Sobic004G234600 Sobic009G063700--Sobic001G419500 Sobic009G075500--Sobic001G459400 Sobic009G075500--Sobic001G216400 Sobic009G075500--Sobic009G063700 Sobic009G075500--Sobic003G092300 Sobic002G239101 Sobic002G239101 Sobic009G075500--Sobic002G239101 Sobic006G213900 Sobic006G213900 Sobic009G075500--Sobic006G213900 Sobic009G075500--Sobic001G158100 Sobic009G075500--Sobic003G300000 Sobic009G075500--Sobic004G056000 Sobic006G271600--Sobic001G071600 Sobic010G194600 Sobic010G194600 Sobic006G271600--Sobic010G194600 Sobic003G117200 Sobic003G117200 Sobic006G271600--Sobic003G117200 Sobic006G271600--Sobic009G243000 Sobic006G271600--Sobic003G300000 Sobic006G271600--Sobic002G078900 Sobic003G046400 Sobic003G046400 Sobic006G271600--Sobic003G046400 Sobic006G271600--Sobic010G183800 Sobic003G088600 Sobic003G088600 Sobic006G271600--Sobic003G088600 Sobic004G281000--Sobic010G183800 Sobic004G281000--Sobic003G300000 Sobic004G281000--Sobic009G075500 Sobic004G281000--Sobic002G078900 Sobic004G281000--Sobic004G234600 Sobic004G281000--Sobic001G456000 Sobic001G457600 Sobic001G457600 Sobic004G281000--Sobic001G457600 Sobic004G281000--Sobic001G071600 Sobic004G281000--Sobic001G216400 Sobic002G178700 Sobic002G178700 Sobic001G419500--Sobic002G178700 Sobic001G137500 Sobic001G137500 Sobic001G419500--Sobic001G137500 Sobic001G419500--Sobic001G216400 Sobic003G006000 Sobic003G006000 Sobic001G419500--Sobic003G006000 Sobic001G419500--Sobic001G457600 Sobic001G419500--Sobic009G063700 Sobic002G258000 Sobic002G258000 Sobic001G419500--Sobic002G258000 Sobic001G419500--Sobic010G194600 Sobic001G419500--Sobic009G075500
Octagon: transcription factors


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