Gene annotation
Transcriptome id Sobic.002G078900.8,Sobic.002G078900.9,Sobic.002G078900.7,Sobic.002G078900.3,Sobic.002G078900.5,Sobic.002G078900.4,Sobic.002G078900.6
Synonym Sb02g006590
Functional annotation agenet domain containing protein, expressed
UniProt A0A1W0W2R8 , A0A1W0W2Y6 , A0A1W0W2W7 , A0A1W0W2W2 , A0A1W0W2U8
Pfam PF05641 PF05641 PF05266
Panther DB PTHR31917 PTHR31917:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G26540 : Agenet domain-containing protein
RAP-DB (Rice) LOC_Os11g35060.1 : agenet domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G456000 YABBY domain containing protein, putative, expressed -
2 Sobic.010G183800 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
3 Sobic.001G459400 B3 DNA binding domain containing protein, expressed -
4 Sobic.003G300000 expressed protein -
5 Sobic.001G106500 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
6 Sobic.001G071600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
7 Sobic.001G459300 - -
8 Sobic.003G092300 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
9 Sobic.009G243000 OsFBL2 - F-box domain and LRR containing protein, expressed -
10 Sobic.010G048600 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
11 Sobic.006G271600 RNA recognition motif containing protein, putative, expressed K13126: polyadenylate-binding protein
12 Sobic.009G048300 transcription factor X1, putative, expressed -
13 Sobic.001G419500 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
14 Sobic.004G281000 MIKC-type MADS box transcription factors(PubMedID : 19749151)@OsMADS6 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
15 Sobic.003G006000 expressed protein -
16 Sobic.003G117200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed -
17 Sobic.009G063700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
18 Sobic.003G046400 transcriptional corepressor LEUNIG, putative, expressed -
19 Sobic.003G243100 expressed protein -
20 Sobic.001G457600 piwi domain containing protein, expressed -


Gene co-expression network
sample Sobic002G078900 Sobic002G078900 Sobic001G456000 Sobic001G456000 Sobic002G078900--Sobic001G456000 Sobic010G183800 Sobic010G183800 Sobic002G078900--Sobic010G183800 Sobic001G459400 Sobic001G459400 Sobic002G078900--Sobic001G459400 Sobic003G300000 Sobic003G300000 Sobic002G078900--Sobic003G300000 Sobic001G106500 Sobic001G106500 Sobic002G078900--Sobic001G106500 Sobic001G071600 Sobic001G071600 Sobic002G078900--Sobic001G071600 Sobic001G459300 Sobic001G459300 Sobic002G078900--Sobic001G459300 Sobic003G092300 Sobic003G092300 Sobic002G078900--Sobic003G092300 Sobic009G243000 Sobic009G243000 Sobic002G078900--Sobic009G243000 Sobic001G456000--Sobic002G078900 Sobic001G456000--Sobic010G183800 Sobic001G456000--Sobic001G459300 Sobic010G048600 Sobic010G048600 Sobic001G456000--Sobic010G048600 Sobic001G456000--Sobic001G459400 Sobic001G456000--Sobic001G106500 Sobic005G070700 Sobic005G070700 Sobic001G456000--Sobic005G070700 Sobic003G243100 Sobic003G243100 Sobic001G456000--Sobic003G243100 Sobic004G277700 Sobic004G277700 Sobic001G456000--Sobic004G277700 Sobic010G183800--Sobic003G092300 Sobic010G183800--Sobic001G459400 Sobic010G183800--Sobic002G078900 Sobic010G183800--Sobic003G300000 Sobic010G183800--Sobic001G456000 Sobic009G063700 Sobic009G063700 Sobic010G183800--Sobic009G063700 Sobic010G183800--Sobic001G071600 Sobic001G158100 Sobic001G158100 Sobic010G183800--Sobic001G158100 Sobic010G183800--Sobic001G106500 Sobic001G459400--Sobic003G092300 Sobic001G459400--Sobic001G459300 Sobic001G459400--Sobic005G070700 Sobic001G459400--Sobic010G183800 Sobic001G459400--Sobic010G048600 Sobic009G075500 Sobic009G075500 Sobic001G459400--Sobic009G075500 Sobic001G459400--Sobic002G078900 Sobic001G459400--Sobic009G063700 Sobic006G015100 Sobic006G015100 Sobic001G459400--Sobic006G015100 Sobic003G300000--Sobic010G183800 Sobic003G300000--Sobic001G459400 Sobic003G300000--Sobic003G092300 Sobic003G300000--Sobic002G078900 Sobic003G300000--Sobic009G063700 Sobic003G300000--Sobic009G075500 Sobic006G271600 Sobic006G271600 Sobic003G300000--Sobic006G271600 Sobic004G281000 Sobic004G281000 Sobic003G300000--Sobic004G281000 Sobic001G419500 Sobic001G419500 Sobic003G300000--Sobic001G419500 Sobic001G106500--Sobic001G459300 Sobic001G106500--Sobic010G048600 Sobic001G106500--Sobic003G092300 Sobic001G106500--Sobic001G456000 Sobic001G106500--Sobic005G070700 Sobic003G046400 Sobic003G046400 Sobic001G106500--Sobic003G046400 Sobic001G106500--Sobic002G078900 Sobic001G106500--Sobic001G459400 Sobic001G106500--Sobic010G183800 Sobic001G071600--Sobic006G271600 Sobic001G071600--Sobic003G046400 Sobic001G071600--Sobic010G183800 Sobic001G071600--Sobic002G078900 Sobic009G048300 Sobic009G048300 Sobic001G071600--Sobic009G048300 Sobic001G071600--Sobic009G243000 Sobic001G071600--Sobic001G456000 Sobic001G071600--Sobic003G300000 Sobic001G071600--Sobic004G281000 Sobic001G459300--Sobic005G070700 Sobic001G459300--Sobic010G048600 Sobic001G459300--Sobic001G459400 Sobic001G459300--Sobic001G106500 Sobic001G274300 Sobic001G274300 Sobic001G459300--Sobic001G274300 Sobic001G459300--Sobic001G456000 Sobic001G459300--Sobic003G092300 Sobic001G459300--Sobic002G078900 Sobic001G459300--Sobic010G183800 Sobic003G092300--Sobic001G459400 Sobic003G092300--Sobic010G183800 Sobic003G092300--Sobic001G459300 Sobic003G092300--Sobic001G106500 Sobic003G092300--Sobic003G300000 Sobic003G092300--Sobic010G048600 Sobic003G092300--Sobic009G075500 Sobic003G092300--Sobic001G158100 Sobic003G092300--Sobic005G070700 Sobic007G033700 Sobic007G033700 Sobic009G243000--Sobic007G033700 Sobic009G243000--Sobic002G078900 Sobic009G243000--Sobic006G271600 Sobic009G243000--Sobic001G071600 Sobic002G205000 Sobic002G205000 Sobic009G243000--Sobic002G205000 Sobic003G006000 Sobic003G006000 Sobic009G243000--Sobic003G006000 Sobic009G243000--Sobic003G046400 Sobic001G137600 Sobic001G137600 Sobic009G243000--Sobic001G137600 Sobic002G258000 Sobic002G258000 Sobic009G243000--Sobic002G258000
Octagon: transcription factors


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