Gene annotation
Transcriptome id Sobic.003G129200.1
Synonym AGO9
Functional annotation argonaute, putative, expressed
UniProt C5XH78
Pfam PF16488 PF08699 PF16486 PF02170 PF02171
Panther DB PTHR22891 PTHR22891:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0003676nucleic acid binding


Orthologs (automatic annotation)
TAIR AT5G21150 : Argonaute family protein
RAP-DB (Rice) LOC_Os01g16870.2 : argonaute, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS1A02G445500 , TraesCS7D02G458800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G374100 beta-galactosidase precursor, putative, expressed -
2 Sobic.004G234600 expressed protein -
3 Sobic.008G137700 XH domain containing protein, expressed -
4 Sobic.001G137800 ankyrin, putative, expressed -
5 Sobic.003G088600 transcription factor X1, putative, expressed -
6 Sobic.002G053350 - -
7 Sobic.002G239101 - -
8 Sobic.003G295100 GDSL-like lipase/acylhydrolase, putative, expressed -
9 Sobic.001G235200 MYB family transcription factor, putative, expressed -
10 Sobic.009G063700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
11 Sobic.007G121650 - -
12 Sobic.003G300000 expressed protein -
13 Sobic.006G228000 glycine-rich protein 2, putative -
14 Sobic.006G213900 OsMADS31 - MADS-box family gene with MIKCc type-box, expressed -
15 Sobic.010G183800 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
16 Sobic.001G459400 B3 DNA binding domain containing protein, expressed -
17 Sobic.009G219500 dehydrogenase/reductase SDR family member 2, putative, expressed K11147: dehydrogenase/reductase SDR family member 4
18 Sobic.003G092300 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
19 Sobic.001G216400 nodulin, putative, expressed K07192: flotillin
20 Sobic.006G271600 RNA recognition motif containing protein, putative, expressed K13126: polyadenylate-binding protein


Gene co-expression network
sample Sobic003G129200 Sobic003G129200 Sobic003G374100 Sobic003G374100 Sobic003G129200--Sobic003G374100 Sobic004G234600 Sobic004G234600 Sobic003G129200--Sobic004G234600 Sobic008G137700 Sobic008G137700 Sobic003G129200--Sobic008G137700 Sobic001G137800 Sobic001G137800 Sobic003G129200--Sobic001G137800 Sobic003G088600 Sobic003G088600 Sobic003G129200--Sobic003G088600 Sobic002G053350 Sobic002G053350 Sobic003G129200--Sobic002G053350 Sobic002G239101 Sobic002G239101 Sobic003G129200--Sobic002G239101 Sobic003G295100 Sobic003G295100 Sobic003G129200--Sobic003G295100 Sobic001G235200 Sobic001G235200 Sobic003G129200--Sobic001G235200 Sobic003G374100--Sobic001G137800 Sobic006G228000 Sobic006G228000 Sobic003G374100--Sobic006G228000 Sobic003G374100--Sobic003G129200 Sobic007G043000 Sobic007G043000 Sobic003G374100--Sobic007G043000 Sobic002G121900 Sobic002G121900 Sobic003G374100--Sobic002G121900 Sobic003G374100--Sobic004G234600 Sobic003G374100--Sobic002G053350 Sobic003G374100--Sobic001G235200 Sobic001G235100 Sobic001G235100 Sobic003G374100--Sobic001G235100 Sobic007G128200 Sobic007G128200 Sobic004G234600--Sobic007G128200 Sobic001G216400 Sobic001G216400 Sobic004G234600--Sobic001G216400 Sobic009G063700 Sobic009G063700 Sobic004G234600--Sobic009G063700 Sobic004G234600--Sobic002G053350 Sobic001G457600 Sobic001G457600 Sobic004G234600--Sobic001G457600 Sobic001G419500 Sobic001G419500 Sobic004G234600--Sobic001G419500 Sobic010G194600 Sobic010G194600 Sobic004G234600--Sobic010G194600 Sobic001G158100 Sobic001G158100 Sobic004G234600--Sobic001G158100 Sobic010G183800 Sobic010G183800 Sobic004G234600--Sobic010G183800 Sobic008G137700--Sobic003G088600 Sobic008G137700--Sobic002G053350 Sobic008G137700--Sobic001G419500 Sobic002G178700 Sobic002G178700 Sobic008G137700--Sobic002G178700 Sobic001G137500 Sobic001G137500 Sobic008G137700--Sobic001G137500 Sobic003G300000 Sobic003G300000 Sobic008G137700--Sobic003G300000 Sobic008G137700--Sobic004G234600 Sobic008G137700--Sobic010G194600 Sobic003G006000 Sobic003G006000 Sobic008G137700--Sobic003G006000 Sobic001G137800--Sobic006G228000 Sobic001G137800--Sobic001G235200 Sobic001G137800--Sobic003G374100 Sobic001G137800--Sobic007G043000 Sobic001G137800--Sobic002G121900 Sobic001G137800--Sobic001G235100 Sobic006G213900 Sobic006G213900 Sobic001G137800--Sobic006G213900 Sobic001G137800--Sobic001G216400 Sobic001G137800--Sobic007G128200 Sobic003G088600--Sobic008G137700 Sobic003G088600--Sobic001G137500 Sobic003G088600--Sobic002G053350 Sobic003G088600--Sobic001G419500 Sobic003G088600--Sobic010G194600 Sobic006G271600 Sobic006G271600 Sobic003G088600--Sobic006G271600 Sobic003G088600--Sobic003G006000 Sobic009G219500 Sobic009G219500 Sobic003G088600--Sobic009G219500 Sobic003G088600--Sobic002G178700 Sobic002G053350--Sobic004G234600 Sobic002G053350--Sobic003G088600 Sobic002G053350--Sobic008G137700 Sobic002G053350--Sobic007G128200 Sobic002G053350--Sobic001G216400 Sobic002G053350--Sobic001G419500 Sobic002G053350--Sobic010G194600 Sobic007G193300 Sobic007G193300 Sobic002G053350--Sobic007G193300 Sobic002G053350--Sobic001G137500 Sobic002G159000 Sobic002G159000 Sobic002G239101--Sobic002G159000 Sobic004G168000 Sobic004G168000 Sobic002G239101--Sobic004G168000 Sobic005G070101 Sobic005G070101 Sobic002G239101--Sobic005G070101 Sobic006G134700 Sobic006G134700 Sobic002G239101--Sobic006G134700 Sobic002G239101--Sobic006G213900 Sobic002G239101--Sobic001G235200 Sobic001G459400 Sobic001G459400 Sobic002G239101--Sobic001G459400 Sobic009G075500 Sobic009G075500 Sobic002G239101--Sobic009G075500 Sobic002G239101--Sobic009G063700 Sobic003G295100--Sobic002G239101 Sobic003G295100--Sobic002G159000 Sobic003G295100--Sobic004G168000 Sobic003G295100--Sobic005G070101 Sobic003G295100--Sobic001G235200 Sobic003G295100--Sobic006G213900 Sobic003G295100--Sobic006G134700 Sobic003G295100--Sobic003G374100 Sobic001G463301 Sobic001G463301 Sobic003G295100--Sobic001G463301 Sobic001G235200--Sobic006G213900 Sobic003G063700 Sobic003G063700 Sobic001G235200--Sobic003G063700 Sobic001G235200--Sobic006G134700 Sobic001G235200--Sobic002G239101 Sobic001G235200--Sobic001G137800 Sobic001G235200--Sobic002G159000 Sobic001G235200--Sobic004G168000 Sobic001G235200--Sobic005G070101 Sobic009G211300 Sobic009G211300 Sobic001G235200--Sobic009G211300
Octagon: transcription factors


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