Gene annotation
Transcriptome id Sobic.003G204200.1
Synonym Sb03g026620
Functional annotation AP2/B3 transcription factor (PubMedID : 27016024)
B3 DNA binding domain containing protein, expressed
UniProt C5XPJ7
Pfam PF02362
Panther DB PTHR31391 PTHR31391:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT3G19184 : AP2/B3-like transcriptional factor family protein
RAP-DB (Rice) LOC_Os06g09420.1 : B3 DNA binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a054883 , Zm00025a029909 , Zm00025a028565
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G237000 fasciclin domain containing protein, expressed -
2 Sobic.004G321400 BRUSHY 1, putative, expressed -
3 Sobic.001G105800 OsFBX109 - F-box domain containing protein, expressed -
4 Sobic.010G255000 uncharacterized protein At4g06744 precursor, putative, expressed -
5 Sobic.004G035800 uncharacterized protein At4g06744 precursor, putative, expressed -
6 Sobic.009G172950 - K02541: DNA replication licensing factor MCM3
7 Sobic.010G092400 glycosyl transferase 8 domain containing protein, putative, expressed -
8 Sobic.004G190500 sucrose transporters("PubMedID : 27986867,PubMedID : 23805151")@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@sucrose transporter BoSUT1, putative, expressed K15378: solute carrier family 45, member 1/2/4
9 Sobic.002G223900 OsFBX330 - F-box domain containing protein, expressed -
10 Sobic.003G393100 chromosome segregation protein, putative, expressed K06674: structural maintenance of chromosome 2
11 Sobic.007G007800 DNA repair metallo-beta-lactamase, putative, expressed K15340: DCLRE1A, SNM1A, DNA cross-link repair 1A protein
12 Sobic.004G234600 expressed protein -
13 Sobic.003G244000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
14 Sobic.001G238900 OsFBX386 - F-box domain containing protein, expressed -
15 Sobic.002G196500 linker histone H1 and H5 family protein, expressed -
16 Sobic.007G121650 - -
17 Sobic.004G327600 expressed protein -
18 Sobic.001G118800 homologous-pairing protein meu13, putative, expressed K06695: 26S proteasome regulatory subunit, ATPase 3, interacting protein
19 Sobic.008G070700 leafbladeless1, putative, expressed -
20 Sobic.003G387700 expressed protein -


Gene co-expression network
sample Sobic003G204200 Sobic003G204200 Sobic002G237000 Sobic002G237000 Sobic003G204200--Sobic002G237000 Sobic004G321400 Sobic004G321400 Sobic003G204200--Sobic004G321400 Sobic001G105800 Sobic001G105800 Sobic003G204200--Sobic001G105800 Sobic010G255000 Sobic010G255000 Sobic003G204200--Sobic010G255000 Sobic004G035800 Sobic004G035800 Sobic003G204200--Sobic004G035800 Sobic009G172950 Sobic009G172950 Sobic003G204200--Sobic009G172950 Sobic010G092400 Sobic010G092400 Sobic003G204200--Sobic010G092400 Sobic004G190500 Sobic004G190500 Sobic003G204200--Sobic004G190500 Sobic002G223900 Sobic002G223900 Sobic003G204200--Sobic002G223900 Sobic006G228000 Sobic006G228000 Sobic002G237000--Sobic006G228000 Sobic001G137800 Sobic001G137800 Sobic002G237000--Sobic001G137800 Sobic001G216400 Sobic001G216400 Sobic002G237000--Sobic001G216400 Sobic009G075500 Sobic009G075500 Sobic002G237000--Sobic009G075500 Sobic007G043000 Sobic007G043000 Sobic002G237000--Sobic007G043000 Sobic001G235200 Sobic001G235200 Sobic002G237000--Sobic001G235200 Sobic002G237000--Sobic003G204200 Sobic004G234600 Sobic004G234600 Sobic002G237000--Sobic004G234600 Sobic003G092300 Sobic003G092300 Sobic002G237000--Sobic003G092300 Sobic003G183700 Sobic003G183700 Sobic004G321400--Sobic003G183700 Sobic009G087000 Sobic009G087000 Sobic004G321400--Sobic009G087000 Sobic005G110535 Sobic005G110535 Sobic004G321400--Sobic005G110535 Sobic002G290000 Sobic002G290000 Sobic004G321400--Sobic002G290000 Sobic003G369200 Sobic003G369200 Sobic004G321400--Sobic003G369200 Sobic008G129200 Sobic008G129200 Sobic004G321400--Sobic008G129200 Sobic004G095200 Sobic004G095200 Sobic004G321400--Sobic004G095200 Sobic004G321400--Sobic009G172950 Sobic004G331600 Sobic004G331600 Sobic004G321400--Sobic004G331600 Sobic007G007800 Sobic007G007800 Sobic001G105800--Sobic007G007800 Sobic001G105800--Sobic002G223900 Sobic009G184200 Sobic009G184200 Sobic001G105800--Sobic009G184200 Sobic003G444300 Sobic003G444300 Sobic001G105800--Sobic003G444300 Sobic003G387700 Sobic003G387700 Sobic001G105800--Sobic003G387700 Sobic001G083300 Sobic001G083300 Sobic001G105800--Sobic001G083300 Sobic001G456500 Sobic001G456500 Sobic001G105800--Sobic001G456500 Sobic010G105400 Sobic010G105400 Sobic001G105800--Sobic010G105400 Sobic001G105800--Sobic009G172950 Sobic007G147200 Sobic007G147200 Sobic010G255000--Sobic007G147200 Sobic001G101700 Sobic001G101700 Sobic010G255000--Sobic001G101700 Sobic007G201900 Sobic007G201900 Sobic010G255000--Sobic007G201900 Sobic003G046400 Sobic003G046400 Sobic010G255000--Sobic003G046400 Sobic002G255600 Sobic002G255600 Sobic010G255000--Sobic002G255600 Sobic007G137101 Sobic007G137101 Sobic010G255000--Sobic007G137101 Sobic001G106500 Sobic001G106500 Sobic010G255000--Sobic001G106500 Sobic007G121200 Sobic007G121200 Sobic010G255000--Sobic007G121200 Sobic010G220800 Sobic010G220800 Sobic010G255000--Sobic010G220800 Sobic002G345800 Sobic002G345800 Sobic004G035800--Sobic002G345800 Sobic010G183800 Sobic010G183800 Sobic004G035800--Sobic010G183800 Sobic004G035800--Sobic003G204200 Sobic005G163500 Sobic005G163500 Sobic004G035800--Sobic005G163500 Sobic004G035800--Sobic010G255000 Sobic001G171200 Sobic001G171200 Sobic004G035800--Sobic001G171200 Sobic001G101900 Sobic001G101900 Sobic004G035800--Sobic001G101900 Sobic001G463301 Sobic001G463301 Sobic004G035800--Sobic001G463301 Sobic004G035800--Sobic002G237000 Sobic009G172950--Sobic003G183700 Sobic009G172950--Sobic009G087000 Sobic003G032200 Sobic003G032200 Sobic009G172950--Sobic003G032200 Sobic009G172950--Sobic003G444300 Sobic009G172950--Sobic001G083300 Sobic009G172950--Sobic009G184200 Sobic009G172950--Sobic004G321400 Sobic009G172950--Sobic001G105800 Sobic001G146900 Sobic001G146900 Sobic009G172950--Sobic001G146900 Sobic007G116800 Sobic007G116800 Sobic010G092400--Sobic007G116800 Sobic005G062600 Sobic005G062600 Sobic010G092400--Sobic005G062600 Sobic003G085900 Sobic003G085900 Sobic010G092400--Sobic003G085900 Sobic010G092400--Sobic007G007800 Sobic010G092400--Sobic009G184200 Sobic010G269700 Sobic010G269700 Sobic010G092400--Sobic010G269700 Sobic007G087800 Sobic007G087800 Sobic010G092400--Sobic007G087800 Sobic010G092400--Sobic003G387700 Sobic008G070700 Sobic008G070700 Sobic010G092400--Sobic008G070700 Sobic002G112000 Sobic002G112000 Sobic004G190500--Sobic002G112000 Sobic002G190000 Sobic002G190000 Sobic004G190500--Sobic002G190000 Sobic004G190500--Sobic004G321400 Sobic002G317700 Sobic002G317700 Sobic004G190500--Sobic002G317700 Sobic004G190500--Sobic003G204200 Sobic004G317000 Sobic004G317000 Sobic004G190500--Sobic004G317000 Sobic001G118800 Sobic001G118800 Sobic004G190500--Sobic001G118800 Sobic007G121650 Sobic007G121650 Sobic004G190500--Sobic007G121650 Sobic009G143200 Sobic009G143200 Sobic004G190500--Sobic009G143200 Sobic002G223900--Sobic001G456500 Sobic002G223900--Sobic001G083300 Sobic002G223900--Sobic001G105800 Sobic002G223900--Sobic004G331600 Sobic002G223900--Sobic007G007800 Sobic002G223900--Sobic008G129200 Sobic006G116500 Sobic006G116500 Sobic002G223900--Sobic006G116500 Sobic002G223900--Sobic003G183700 Sobic002G223900--Sobic003G387700
Octagon: transcription factors


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