Gene annotation
Transcriptome id Sobic.003G244000.1
Synonym Sb03g030040
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
aldose 1-epimerase, putative, expressed
UniProt C5XFB8
Pfam PF01263
Panther DB PTHR11122 PTHR11122:SF10
NCBI CDD -
KEGG Orthology K01792; glucose-6-phosphate 1-epimerase
Gene Ontology GO:0016853; isomerase activity GO:0005975carbohydrate metabolic process


Orthologs (automatic annotation)
TAIR AT3G61610 : Galactose mutarotase-like superfamily protein
RAP-DB (Rice) LOC_Os01g46950.1 : aldose 1-epimerase, putative, expressed
MaizeGDB (Corn) Zm00025a028176
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.003G244000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G238900 OsFBX386 - F-box domain containing protein, expressed -
2 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
3 Sobic.007G201900 expressed protein -
4 Sobic.002G230800 expressed protein -
5 Sobic.002G351100 DNA repair protein Rad51, putative, expressed K04482: DNA repair protein RAD51
6 Sobic.001G118800 homologous-pairing protein meu13, putative, expressed K06695: 26S proteasome regulatory subunit, ATPase 3, interacting protein
7 Sobic.009G143200 DUF630/DUF632 domains containing protein, putative, expressed -
8 Sobic.005G157300 protein binding protein, putative, expressed -
9 Sobic.004G317000 growth regulating factor protein, putative, expressed -
10 Sobic.009G057800 kelch repeat-containing protein, putative, expressed -
11 Sobic.003G204200 AP2/B3 transcription factor(PubMedID : 27016024)@B3 DNA binding domain containing protein, expressed -
12 Sobic.003G084200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.002G112000 protein binding protein, putative, expressed -
14 Sobic.002G190000 ZOS9-05 - C2H2 zinc finger protein, expressed -
15 Sobic.001G105800 OsFBX109 - F-box domain containing protein, expressed -
16 Sobic.003G055600 expressed protein -
17 Sobic.010G003300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
18 Sobic.009G172950 - K02541: DNA replication licensing factor MCM3
19 Sobic.003G320300 ZOS1-12 - C2H2 zinc finger protein, expressed -
20 Sobic.007G121650 - -


Gene co-expression network
sample Sobic003G244000 Sobic003G244000 Sobic001G238900 Sobic001G238900 Sobic003G244000--Sobic001G238900 Sobic001G054700 Sobic001G054700 Sobic003G244000--Sobic001G054700 Sobic007G201900 Sobic007G201900 Sobic003G244000--Sobic007G201900 Sobic002G230800 Sobic002G230800 Sobic003G244000--Sobic002G230800 Sobic002G351100 Sobic002G351100 Sobic003G244000--Sobic002G351100 Sobic001G118800 Sobic001G118800 Sobic003G244000--Sobic001G118800 Sobic009G143200 Sobic009G143200 Sobic003G244000--Sobic009G143200 Sobic005G157300 Sobic005G157300 Sobic003G244000--Sobic005G157300 Sobic004G317000 Sobic004G317000 Sobic003G244000--Sobic004G317000 Sobic001G238900--Sobic003G244000 Sobic001G238900--Sobic002G230800 Sobic001G105800 Sobic001G105800 Sobic001G238900--Sobic001G105800 Sobic002G246900 Sobic002G246900 Sobic001G238900--Sobic002G246900 Sobic002G223900 Sobic002G223900 Sobic001G238900--Sobic002G223900 Sobic009G109300 Sobic009G109300 Sobic001G238900--Sobic009G109300 Sobic001G238900--Sobic004G317000 Sobic001G238900--Sobic001G118800 Sobic001G169800 Sobic001G169800 Sobic001G238900--Sobic001G169800 Sobic006G221300 Sobic006G221300 Sobic001G054700--Sobic006G221300 Sobic009G077300 Sobic009G077300 Sobic001G054700--Sobic009G077300 Sobic004G108400 Sobic004G108400 Sobic001G054700--Sobic004G108400 Sobic001G054700--Sobic009G143200 Sobic002G050700 Sobic002G050700 Sobic001G054700--Sobic002G050700 Sobic006G124400 Sobic006G124400 Sobic001G054700--Sobic006G124400 Sobic009G127800 Sobic009G127800 Sobic001G054700--Sobic009G127800 Sobic005G153000 Sobic005G153000 Sobic001G054700--Sobic005G153000 Sobic006G221800 Sobic006G221800 Sobic001G054700--Sobic006G221800 Sobic009G057800 Sobic009G057800 Sobic007G201900--Sobic009G057800 Sobic001G101700 Sobic001G101700 Sobic007G201900--Sobic001G101700 Sobic010G255000 Sobic010G255000 Sobic007G201900--Sobic010G255000 Sobic002G112000 Sobic002G112000 Sobic007G201900--Sobic002G112000 Sobic002G279400 Sobic002G279400 Sobic007G201900--Sobic002G279400 Sobic001G101900 Sobic001G101900 Sobic007G201900--Sobic001G101900 Sobic007G201900--Sobic003G244000 Sobic007G201900--Sobic009G143200 Sobic007G147200 Sobic007G147200 Sobic007G201900--Sobic007G147200 Sobic002G230800--Sobic001G238900 Sobic010G105400 Sobic010G105400 Sobic002G230800--Sobic010G105400 Sobic002G230800--Sobic006G124400 Sobic002G230800--Sobic001G054700 Sobic003G179500 Sobic003G179500 Sobic002G230800--Sobic003G179500 Sobic002G230800--Sobic009G109300 Sobic007G218100 Sobic007G218100 Sobic002G230800--Sobic007G218100 Sobic002G230800--Sobic002G246900 Sobic002G230800--Sobic003G244000 Sobic001G300400 Sobic001G300400 Sobic002G351100--Sobic001G300400 Sobic003G297200 Sobic003G297200 Sobic002G351100--Sobic003G297200 Sobic001G521100 Sobic001G521100 Sobic002G351100--Sobic001G521100 Sobic002G351100--Sobic003G244000 Sobic002G315400 Sobic002G315400 Sobic002G351100--Sobic002G315400 Sobic009G194900 Sobic009G194900 Sobic002G351100--Sobic009G194900 Sobic001G440900 Sobic001G440900 Sobic002G351100--Sobic001G440900 Sobic002G351100--Sobic002G246900 Sobic002G351100--Sobic001G238900 Sobic007G121650 Sobic007G121650 Sobic001G118800--Sobic007G121650 Sobic001G118800--Sobic001G238900 Sobic003G055600 Sobic003G055600 Sobic001G118800--Sobic003G055600 Sobic001G118800--Sobic003G244000 Sobic002G190000 Sobic002G190000 Sobic001G118800--Sobic002G190000 Sobic004G190500 Sobic004G190500 Sobic001G118800--Sobic004G190500 Sobic003G204200 Sobic003G204200 Sobic001G118800--Sobic003G204200 Sobic001G118800--Sobic004G317000 Sobic007G121600 Sobic007G121600 Sobic001G118800--Sobic007G121600 Sobic009G143200--Sobic005G157300 Sobic009G143200--Sobic004G317000 Sobic009G143200--Sobic001G054700 Sobic009G143200--Sobic003G055600 Sobic009G143200--Sobic006G221300 Sobic009G143200--Sobic009G077300 Sobic009G143200--Sobic004G108400 Sobic004G052200 Sobic004G052200 Sobic009G143200--Sobic004G052200 Sobic007G187700 Sobic007G187700 Sobic009G143200--Sobic007G187700 Sobic005G157300--Sobic009G143200 Sobic005G157300--Sobic003G055600 Sobic003G183700 Sobic003G183700 Sobic005G157300--Sobic003G183700 Sobic001G377700 Sobic001G377700 Sobic005G157300--Sobic001G377700 Sobic005G157300--Sobic001G054700 Sobic005G157300--Sobic006G221300 Sobic005G157300--Sobic007G187700 Sobic009G172950 Sobic009G172950 Sobic005G157300--Sobic009G172950 Sobic005G157300--Sobic009G127800 Sobic004G317000--Sobic009G143200 Sobic004G317000--Sobic007G187700 Sobic001G104500 Sobic001G104500 Sobic004G317000--Sobic001G104500 Sobic006G196600 Sobic006G196600 Sobic004G317000--Sobic006G196600 Sobic003G282500 Sobic003G282500 Sobic004G317000--Sobic003G282500 Sobic004G317000--Sobic001G238900 Sobic004G317000--Sobic001G054700 Sobic004G317000--Sobic002G223900 Sobic004G282601 Sobic004G282601 Sobic004G317000--Sobic004G282601
Octagon: transcription factors


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