Gene annotation
Transcriptome id Sobic.003G320300.1
Synonym Sb03g036720
Functional annotation ZOS1-12 - C2H2 zinc finger protein, expressed
UniProt C5XLS9
Pfam -
Panther DB PTHR31681 PTHR31681:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G54630 : zinc finger protein-related
RAP-DB (Rice) LOC_Os01g57650.1 : ZOS1-12 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a039874 , Zm00025a027252
Brachypodium KQK10113 , PNT73013 , PNT73012 , PNT73011
Barley HORVU3Hr1G077490.1 , HORVU3Hr1G077490.2 , HORVU3Hr1G077490.3
Wheat TraesCS3B02G353600 , TraesCS3D02G317900 , TraesCS3A02G324600 , TraesCS3A02G324600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G008300 WD domain, G-beta repeat domain containing protein, expressed K10751: chromatin assembly factor 1 subunit B
2 Sobic.004G108400 heavy-metal-associated domain-containing protein, putative, expressed -
3 Sobic.010G269700 expressed protein -
4 Sobic.001G452900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
5 Sobic.009G172950 - K02541: DNA replication licensing factor MCM3
6 Sobic.005G157300 protein binding protein, putative, expressed -
7 Sobic.001G295400 protein kinase domain containing protein, expressed K02214: cell division control protein 7
8 Sobic.003G373900 universal stress protein domain containing protein, putative, expressed -
9 Sobic.004G238801 - -
10 Sobic.010G086000 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
11 Sobic.007G201900 expressed protein -
12 Sobic.006G274200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Eukaryotic aspartyl protease domain containing protein, expressed -
13 Sobic.002G286100 DUF292 domain containing protein, expressed -
14 Sobic.006G142500 protein kinase, putative, expressed -
15 Sobic.007G121650 - -
16 Sobic.003G244000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
17 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
18 Sobic.003G032200 IQ calmodulin-binding motif domain containing protein, expressed -
19 Sobic.007G188001 - K11844: ubiquitin carboxyl-terminal hydrolase 16/45
20 Sobic.002G317700 BNR/Asp-box repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic003G320300 Sobic003G320300 Sobic007G008300 Sobic007G008300 Sobic003G320300--Sobic007G008300 Sobic004G108400 Sobic004G108400 Sobic003G320300--Sobic004G108400 Sobic010G269700 Sobic010G269700 Sobic003G320300--Sobic010G269700 Sobic001G452900 Sobic001G452900 Sobic003G320300--Sobic001G452900 Sobic009G172950 Sobic009G172950 Sobic003G320300--Sobic009G172950 Sobic005G157300 Sobic005G157300 Sobic003G320300--Sobic005G157300 Sobic001G295400 Sobic001G295400 Sobic003G320300--Sobic001G295400 Sobic003G373900 Sobic003G373900 Sobic003G320300--Sobic003G373900 Sobic004G238801 Sobic004G238801 Sobic003G320300--Sobic004G238801 Sobic007G008300--Sobic001G295400 Sobic007G008300--Sobic009G172950 Sobic007G008300--Sobic004G108400 Sobic001G105800 Sobic001G105800 Sobic007G008300--Sobic001G105800 Sobic007G008300--Sobic003G320300 Sobic009G184200 Sobic009G184200 Sobic007G008300--Sobic009G184200 Sobic007G007800 Sobic007G007800 Sobic007G008300--Sobic007G007800 Sobic001G377700 Sobic001G377700 Sobic007G008300--Sobic001G377700 Sobic003G055600 Sobic003G055600 Sobic007G008300--Sobic003G055600 Sobic001G054700 Sobic001G054700 Sobic004G108400--Sobic001G054700 Sobic006G221300 Sobic006G221300 Sobic004G108400--Sobic006G221300 Sobic009G143200 Sobic009G143200 Sobic004G108400--Sobic009G143200 Sobic004G108400--Sobic001G452900 Sobic004G108400--Sobic007G008300 Sobic009G127800 Sobic009G127800 Sobic004G108400--Sobic009G127800 Sobic007G162400 Sobic007G162400 Sobic004G108400--Sobic007G162400 Sobic002G050700 Sobic002G050700 Sobic004G108400--Sobic002G050700 Sobic009G101100 Sobic009G101100 Sobic004G108400--Sobic009G101100 Sobic006G274200 Sobic006G274200 Sobic010G269700--Sobic006G274200 Sobic003G019900 Sobic003G019900 Sobic010G269700--Sobic003G019900 Sobic002G222500 Sobic002G222500 Sobic010G269700--Sobic002G222500 Sobic010G269700--Sobic003G373900 Sobic010G092400 Sobic010G092400 Sobic010G269700--Sobic010G092400 Sobic010G086000 Sobic010G086000 Sobic010G269700--Sobic010G086000 Sobic003G002000 Sobic003G002000 Sobic010G269700--Sobic003G002000 Sobic005G020100 Sobic005G020100 Sobic010G269700--Sobic005G020100 Sobic010G241100 Sobic010G241100 Sobic010G269700--Sobic010G241100 Sobic001G452900--Sobic010G086000 Sobic001G452900--Sobic010G241100 Sobic001G452900--Sobic004G108400 Sobic010G192500 Sobic010G192500 Sobic001G452900--Sobic010G192500 Sobic006G142500 Sobic006G142500 Sobic001G452900--Sobic006G142500 Sobic003G032200 Sobic003G032200 Sobic001G452900--Sobic003G032200 Sobic002G284100 Sobic002G284100 Sobic001G452900--Sobic002G284100 Sobic004G267600 Sobic004G267600 Sobic001G452900--Sobic004G267600 Sobic001G452900--Sobic009G172950 Sobic003G183700 Sobic003G183700 Sobic009G172950--Sobic003G183700 Sobic009G087000 Sobic009G087000 Sobic009G172950--Sobic009G087000 Sobic009G172950--Sobic003G032200 Sobic003G444300 Sobic003G444300 Sobic009G172950--Sobic003G444300 Sobic001G083300 Sobic001G083300 Sobic009G172950--Sobic001G083300 Sobic009G172950--Sobic009G184200 Sobic004G321400 Sobic004G321400 Sobic009G172950--Sobic004G321400 Sobic009G172950--Sobic001G105800 Sobic001G146900 Sobic001G146900 Sobic009G172950--Sobic001G146900 Sobic005G157300--Sobic009G143200 Sobic005G157300--Sobic003G055600 Sobic005G157300--Sobic003G183700 Sobic005G157300--Sobic001G377700 Sobic005G157300--Sobic001G054700 Sobic005G157300--Sobic006G221300 Sobic007G187700 Sobic007G187700 Sobic005G157300--Sobic007G187700 Sobic005G157300--Sobic009G172950 Sobic005G157300--Sobic009G127800 Sobic001G295400--Sobic007G008300 Sobic001G295400--Sobic001G377700 Sobic005G110535 Sobic005G110535 Sobic001G295400--Sobic005G110535 Sobic001G295400--Sobic004G108400 Sobic002G290000 Sobic002G290000 Sobic001G295400--Sobic002G290000 Sobic001G295400--Sobic003G183700 Sobic002G420000 Sobic002G420000 Sobic001G295400--Sobic002G420000 Sobic001G295400--Sobic003G320300 Sobic006G195500 Sobic006G195500 Sobic001G295400--Sobic006G195500 Sobic004G343700 Sobic004G343700 Sobic003G373900--Sobic004G343700 Sobic007G000500 Sobic007G000500 Sobic003G373900--Sobic007G000500 Sobic003G373900--Sobic010G269700 Sobic001G074000 Sobic001G074000 Sobic003G373900--Sobic001G074000 Sobic003G373900--Sobic006G274200 Sobic004G313200 Sobic004G313200 Sobic003G373900--Sobic004G313200 Sobic003G373900--Sobic003G019900 Sobic001G540900 Sobic001G540900 Sobic003G373900--Sobic001G540900 Sobic004G246500 Sobic004G246500 Sobic003G373900--Sobic004G246500 Sobic007G121650 Sobic007G121650 Sobic004G238801--Sobic007G121650 Sobic010G178300 Sobic010G178300 Sobic004G238801--Sobic010G178300 Sobic004G238801--Sobic005G157300 Sobic010G204700 Sobic010G204700 Sobic004G238801--Sobic010G204700 Sobic002G272300 Sobic002G272300 Sobic004G238801--Sobic002G272300 Sobic001G148450 Sobic001G148450 Sobic004G238801--Sobic001G148450 Sobic004G238801--Sobic001G377700 Sobic004G238801--Sobic003G320300 Sobic001G439400 Sobic001G439400 Sobic004G238801--Sobic001G439400
Octagon: transcription factors


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