Gene annotation
Transcriptome id Sobic.004G238801.1
Synonym -
Functional annotation -
UniProt A0A1Z5RP18
Pfam PF03330 PF01357
Panther DB PTHR31867 PTHR31867:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G69530 : expansin A1
RAP-DB (Rice) LOC_Os02g51040.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a027043 , Zm00025a043994 , Zm00025a008818 , Zm00025a033209 , Zm00025a055602 , Zm00025a016421 , Zm00025a022026
Brachypodium KQK01952 , KQK10365 , KQK05753
Barley HORVU6Hr1G075970.1 , HORVU6Hr1G075970.2 , HORVU6Hr1G075970.3 , HORVU6Hr1G075970.4 , HORVU6Hr1G075970.5 , HORVU6Hr1G075970.6 , HORVU6Hr1G075970.7 , HORVU6Hr1G075970.8 , HORVU6Hr1G075970.9 , HORVU1Hr1G069830.2 , HORVU1Hr1G069830.1 , HORVU1Hr1G069830.7 , HORVU1Hr1G069830.6 , HORVU1Hr1G069830.4 , HORVU3Hr1G081180.4 , HORVU3Hr1G081180.3 , HORVU3Hr1G081180.2 , HORVU3Hr1G081180.1 , HORVU3Hr1G081230.9 , HORVU3Hr1G081230.8 , HORVU3Hr1G081230.5 , HORVU3Hr1G081230.3 , HORVU3Hr1G081230.2 , HORVU5Hr1G119860.1 , HORVU5Hr1G119860.2 , HORVU3Hr1G075210.1 , HORVU3Hr1G075210.2 , HORVU5Hr1G113580.5 , HORVU5Hr1G113580.4 , HORVU5Hr1G113580.6 , HORVU5Hr1G113580.1 , HORVU5Hr1G113580.3 , HORVU5Hr1G113580.2 , HORVU3Hr1G034030.2 , HORVU3Hr1G034030.1 , HORVU3Hr1G034030.5 , HORVU3Hr1G034030.4
Wheat TraesCS3D02G338400 , TraesCS6A02G307900 , TraesCS5D02G494800 , TraesCS5A02G481200 , TraesCS3B02G376800 , TraesCS1D02G299700 , TraesCS1A02G300200 , TraesCS5B02G528400 , TraesCS1B02G310300 , TraesCS6B02G336500 , TraesCS6D02G287100 , TraesCS6D02G287100 , TraesCS3A02G344800 , TraesCS1A02G300200 , TraesCS5B02G494400 , TraesCS3B02G376900 , TraesCS3A02G165900 , TraesCS3D02G338600 , TraesCS3B02G199900
Populus PNT51889


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G121650 - -
2 Sobic.010G178300 aldehyde dehydrogenase, putative, expressed K12355: coniferyl-aldehyde dehydrogenase
3 Sobic.005G157300 protein binding protein, putative, expressed -
4 Sobic.010G204700 LTPL129 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.002G272300 expressed protein -
6 Sobic.001G148450 - -
7 Sobic.001G377700 expressed protein K10895: fanconi anemia group I protein
8 Sobic.003G320300 ZOS1-12 - C2H2 zinc finger protein, expressed -
9 Sobic.001G439400 glycosyl hydrolase family 10 protein, putative, expressed -
10 Sobic.003G001751 - -
11 Sobic.010G269700 expressed protein -
12 Sobic.004G317000 growth regulating factor protein, putative, expressed -
13 Sobic.006G235600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@beta-D-xylosidase, putative, expressed K15920: xylan 1,4-beta-xylosidase
14 Sobic.003G183700 MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed K02212: MCM4, DNA replication licensing factor MCM4
15 Sobic.007G007800 DNA repair metallo-beta-lactamase, putative, expressed K15340: DCLRE1A, SNM1A, DNA cross-link repair 1A protein
16 Sobic.003G361200 CDC6 - Putative DNA replication initiation protein, expressed K02213: cell division control protein 6
17 Sobic.003G055600 expressed protein -
18 Sobic.002G223900 OsFBX330 - F-box domain containing protein, expressed -
19 Sobic.006G196600 expressed protein -
20 Sobic.006G051000 POLA3 - Putative DNA polymerase alpha complex subunit, expressed K02685: DNA primase large subunit


Gene co-expression network
sample Sobic004G238801 Sobic004G238801 Sobic007G121650 Sobic007G121650 Sobic004G238801--Sobic007G121650 Sobic010G178300 Sobic010G178300 Sobic004G238801--Sobic010G178300 Sobic005G157300 Sobic005G157300 Sobic004G238801--Sobic005G157300 Sobic010G204700 Sobic010G204700 Sobic004G238801--Sobic010G204700 Sobic002G272300 Sobic002G272300 Sobic004G238801--Sobic002G272300 Sobic001G148450 Sobic001G148450 Sobic004G238801--Sobic001G148450 Sobic001G377700 Sobic001G377700 Sobic004G238801--Sobic001G377700 Sobic003G320300 Sobic003G320300 Sobic004G238801--Sobic003G320300 Sobic001G439400 Sobic001G439400 Sobic004G238801--Sobic001G439400 Sobic007G121600 Sobic007G121600 Sobic007G121650--Sobic007G121600 Sobic007G121650--Sobic004G238801 Sobic007G007800 Sobic007G007800 Sobic007G121650--Sobic007G007800 Sobic003G129200 Sobic003G129200 Sobic007G121650--Sobic003G129200 Sobic003G374100 Sobic003G374100 Sobic007G121650--Sobic003G374100 Sobic001G118800 Sobic001G118800 Sobic007G121650--Sobic001G118800 Sobic007G121650--Sobic010G204700 Sobic005G020100 Sobic005G020100 Sobic007G121650--Sobic005G020100 Sobic010G092400 Sobic010G092400 Sobic007G121650--Sobic010G092400 Sobic010G178300--Sobic004G238801 Sobic010G241100 Sobic010G241100 Sobic010G178300--Sobic010G241100 Sobic010G269700 Sobic010G269700 Sobic010G178300--Sobic010G269700 Sobic010G178300--Sobic001G148450 Sobic010G178300--Sobic005G157300 Sobic010G178300--Sobic002G272300 Sobic003G032200 Sobic003G032200 Sobic010G178300--Sobic003G032200 Sobic004G243900 Sobic004G243900 Sobic010G178300--Sobic004G243900 Sobic010G178300--Sobic001G377700 Sobic009G143200 Sobic009G143200 Sobic005G157300--Sobic009G143200 Sobic003G055600 Sobic003G055600 Sobic005G157300--Sobic003G055600 Sobic003G183700 Sobic003G183700 Sobic005G157300--Sobic003G183700 Sobic005G157300--Sobic001G377700 Sobic001G054700 Sobic001G054700 Sobic005G157300--Sobic001G054700 Sobic006G221300 Sobic006G221300 Sobic005G157300--Sobic006G221300 Sobic007G187700 Sobic007G187700 Sobic005G157300--Sobic007G187700 Sobic009G172950 Sobic009G172950 Sobic005G157300--Sobic009G172950 Sobic009G127800 Sobic009G127800 Sobic005G157300--Sobic009G127800 Sobic010G204700--Sobic003G374100 Sobic010G204700--Sobic005G020100 Sobic010G230000 Sobic010G230000 Sobic010G204700--Sobic010G230000 Sobic010G204700--Sobic007G121650 Sobic010G204700--Sobic007G007800 Sobic010G204700--Sobic004G238801 Sobic003G444000 Sobic003G444000 Sobic010G204700--Sobic003G444000 Sobic006G111100 Sobic006G111100 Sobic010G204700--Sobic006G111100 Sobic010G204700--Sobic001G439400 Sobic002G272300--Sobic007G007800 Sobic009G184200 Sobic009G184200 Sobic002G272300--Sobic009G184200 Sobic010G147700 Sobic010G147700 Sobic002G272300--Sobic010G147700 Sobic002G272300--Sobic003G032200 Sobic009G087000 Sobic009G087000 Sobic002G272300--Sobic009G087000 Sobic001G083300 Sobic001G083300 Sobic002G272300--Sobic001G083300 Sobic004G331600 Sobic004G331600 Sobic002G272300--Sobic004G331600 Sobic008G129200 Sobic008G129200 Sobic002G272300--Sobic008G129200 Sobic001G456500 Sobic001G456500 Sobic002G272300--Sobic001G456500 Sobic006G172000 Sobic006G172000 Sobic001G148450--Sobic006G172000 Sobic001G148450--Sobic004G238801 Sobic001G148450--Sobic010G178300 Sobic007G082500 Sobic007G082500 Sobic001G148450--Sobic007G082500 Sobic006G041700 Sobic006G041700 Sobic001G148450--Sobic006G041700 Sobic003G251700 Sobic003G251700 Sobic001G148450--Sobic003G251700 Sobic004G207766 Sobic004G207766 Sobic001G148450--Sobic004G207766 Sobic004G330200 Sobic004G330200 Sobic001G148450--Sobic004G330200 Sobic002G175200 Sobic002G175200 Sobic001G148450--Sobic002G175200 Sobic002G290000 Sobic002G290000 Sobic001G377700--Sobic002G290000 Sobic002G021200 Sobic002G021200 Sobic001G377700--Sobic002G021200 Sobic001G377700--Sobic003G183700 Sobic005G110535 Sobic005G110535 Sobic001G377700--Sobic005G110535 Sobic001G377700--Sobic003G055600 Sobic006G195500 Sobic006G195500 Sobic001G377700--Sobic006G195500 Sobic001G377700--Sobic007G187700 Sobic007G125300 Sobic007G125300 Sobic001G377700--Sobic007G125300 Sobic001G377700--Sobic005G157300 Sobic007G008300 Sobic007G008300 Sobic003G320300--Sobic007G008300 Sobic004G108400 Sobic004G108400 Sobic003G320300--Sobic004G108400 Sobic003G320300--Sobic010G269700 Sobic001G452900 Sobic001G452900 Sobic003G320300--Sobic001G452900 Sobic003G320300--Sobic009G172950 Sobic003G320300--Sobic005G157300 Sobic001G295400 Sobic001G295400 Sobic003G320300--Sobic001G295400 Sobic003G373900 Sobic003G373900 Sobic003G320300--Sobic003G373900 Sobic003G320300--Sobic004G238801 Sobic004G238700 Sobic004G238700 Sobic001G439400--Sobic004G238700 Sobic001G439400--Sobic010G204700 Sobic001G439400--Sobic004G238801 Sobic005G024000 Sobic005G024000 Sobic001G439400--Sobic005G024000 Sobic001G439400--Sobic003G444000 Sobic001G439400--Sobic010G230000 Sobic008G119900 Sobic008G119900 Sobic001G439400--Sobic008G119900 Sobic001G009100 Sobic001G009100 Sobic001G439400--Sobic001G009100 Sobic001G146900 Sobic001G146900 Sobic001G439400--Sobic001G146900
Octagon: transcription factors


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