Gene annotation
Transcriptome id Sobic.001G148450.1
Synonym -
Functional annotation -
UniProt C5WQG3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G172000 pectinesterase, putative, expressed -
2 Sobic.004G238801 - -
3 Sobic.010G178300 aldehyde dehydrogenase, putative, expressed K12355: coniferyl-aldehyde dehydrogenase
4 Sobic.007G082500 MBTB20 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
5 Sobic.006G041700 sex determination protein tasselseed-2, putative, expressed -
6 Sobic.003G251700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed K14486: K14486, auxin response factor
7 Sobic.004G207766 - -
8 Sobic.004G330200 "TGW6(Ortholog in rice:Ishimaru et al., 2013)"(PubMedID : 31659893)@SMP-30/Gluconolaconase/LRE-like region containing protein, expressed -
9 Sobic.002G175200 A3-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with A3 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
10 Sobic.001G246600 MBTB37 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
11 Sobic.001G493100 LTPL82 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.006G135800 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.001G027500 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
14 Sobic.006G226000 expressed protein -
15 Sobic.007G097100 aspartic proteinase nepenthesin precursor, putative, expressed -
16 Sobic.003G001751 - -
17 Sobic.002G055800 zinc finger, C3HC4 type domain containing protein, expressed K16277: E3 ubiquitin-protein ligase DRIP
18 Sobic.003G086800 ZOS1-02 - C2H2 zinc finger protein, expressed -
19 Sobic.002G339732 - -
20 Sobic.005G157300 protein binding protein, putative, expressed -


Gene co-expression network
sample Sobic001G148450 Sobic001G148450 Sobic006G172000 Sobic006G172000 Sobic001G148450--Sobic006G172000 Sobic004G238801 Sobic004G238801 Sobic001G148450--Sobic004G238801 Sobic010G178300 Sobic010G178300 Sobic001G148450--Sobic010G178300 Sobic007G082500 Sobic007G082500 Sobic001G148450--Sobic007G082500 Sobic006G041700 Sobic006G041700 Sobic001G148450--Sobic006G041700 Sobic003G251700 Sobic003G251700 Sobic001G148450--Sobic003G251700 Sobic004G207766 Sobic004G207766 Sobic001G148450--Sobic004G207766 Sobic004G330200 Sobic004G330200 Sobic001G148450--Sobic004G330200 Sobic002G175200 Sobic002G175200 Sobic001G148450--Sobic002G175200 Sobic001G493100 Sobic001G493100 Sobic006G172000--Sobic001G493100 Sobic006G172000--Sobic003G251700 Sobic006G135800 Sobic006G135800 Sobic006G172000--Sobic006G135800 Sobic006G172000--Sobic006G041700 Sobic007G097100 Sobic007G097100 Sobic006G172000--Sobic007G097100 Sobic006G172000--Sobic004G330200 Sobic006G172000--Sobic002G175200 Sobic001G246600 Sobic001G246600 Sobic006G172000--Sobic001G246600 Sobic006G226000 Sobic006G226000 Sobic006G172000--Sobic006G226000 Sobic007G121650 Sobic007G121650 Sobic004G238801--Sobic007G121650 Sobic004G238801--Sobic010G178300 Sobic005G157300 Sobic005G157300 Sobic004G238801--Sobic005G157300 Sobic010G204700 Sobic010G204700 Sobic004G238801--Sobic010G204700 Sobic002G272300 Sobic002G272300 Sobic004G238801--Sobic002G272300 Sobic004G238801--Sobic001G148450 Sobic001G377700 Sobic001G377700 Sobic004G238801--Sobic001G377700 Sobic003G320300 Sobic003G320300 Sobic004G238801--Sobic003G320300 Sobic001G439400 Sobic001G439400 Sobic004G238801--Sobic001G439400 Sobic010G178300--Sobic004G238801 Sobic010G241100 Sobic010G241100 Sobic010G178300--Sobic010G241100 Sobic010G269700 Sobic010G269700 Sobic010G178300--Sobic010G269700 Sobic010G178300--Sobic001G148450 Sobic010G178300--Sobic005G157300 Sobic010G178300--Sobic002G272300 Sobic003G032200 Sobic003G032200 Sobic010G178300--Sobic003G032200 Sobic004G243900 Sobic004G243900 Sobic010G178300--Sobic004G243900 Sobic010G178300--Sobic001G377700 Sobic007G082500--Sobic001G148450 Sobic007G082500--Sobic004G207766 Sobic009G246250 Sobic009G246250 Sobic007G082500--Sobic009G246250 Sobic007G082500--Sobic004G238801 Sobic001G136400 Sobic001G136400 Sobic007G082500--Sobic001G136400 Sobic003G140800 Sobic003G140800 Sobic007G082500--Sobic003G140800 Sobic010G190800 Sobic010G190800 Sobic007G082500--Sobic010G190800 Sobic001G092800 Sobic001G092800 Sobic007G082500--Sobic001G092800 Sobic002G055800 Sobic002G055800 Sobic007G082500--Sobic002G055800 Sobic006G041700--Sobic001G493100 Sobic006G041700--Sobic006G172000 Sobic006G197400 Sobic006G197400 Sobic006G041700--Sobic006G197400 Sobic003G086800 Sobic003G086800 Sobic006G041700--Sobic003G086800 Sobic006G041700--Sobic001G246600 Sobic006G041700--Sobic002G175200 Sobic006G041700--Sobic004G330200 Sobic003G350400 Sobic003G350400 Sobic006G041700--Sobic003G350400 Sobic002G259200 Sobic002G259200 Sobic006G041700--Sobic002G259200 Sobic003G251700--Sobic006G172000 Sobic004G269100 Sobic004G269100 Sobic003G251700--Sobic004G269100 Sobic004G215100 Sobic004G215100 Sobic003G251700--Sobic004G215100 Sobic003G251700--Sobic001G493100 Sobic003G251700--Sobic006G135800 Sobic003G251700--Sobic002G259200 Sobic003G251700--Sobic006G226000 Sobic005G092700 Sobic005G092700 Sobic003G251700--Sobic005G092700 Sobic003G251700--Sobic006G041700 Sobic001G104500 Sobic001G104500 Sobic004G207766--Sobic001G104500 Sobic004G207766--Sobic006G226000 Sobic004G207766--Sobic006G135800 Sobic004G207766--Sobic002G055800 Sobic003G084200 Sobic003G084200 Sobic004G207766--Sobic003G084200 Sobic004G207766--Sobic006G041700 Sobic004G282601 Sobic004G282601 Sobic004G207766--Sobic004G282601 Sobic002G256900 Sobic002G256900 Sobic004G207766--Sobic002G256900 Sobic004G207766--Sobic006G172000 Sobic004G330200--Sobic002G175200 Sobic004G330200--Sobic001G246600 Sobic004G330200--Sobic006G172000 Sobic001G068132 Sobic001G068132 Sobic004G330200--Sobic001G068132 Sobic004G330200--Sobic001G493100 Sobic001G276800 Sobic001G276800 Sobic004G330200--Sobic001G276800 Sobic004G330200--Sobic003G086800 Sobic003G384600 Sobic003G384600 Sobic004G330200--Sobic003G384600 Sobic007G160400 Sobic007G160400 Sobic004G330200--Sobic007G160400 Sobic002G175200--Sobic002G175200 Sobic002G175200--Sobic001G246600 Sobic002G175200--Sobic006G172000 Sobic002G175200--Sobic001G068132 Sobic002G175200--Sobic001G493100 Sobic002G175200--Sobic001G276800 Sobic002G175200--Sobic003G086800 Sobic002G175200--Sobic003G384600 Sobic002G175200--Sobic007G160400
Octagon: transcription factors


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