Gene annotation
Transcriptome id Sobic.007G082500.1
Synonym BPM1, ATBPM1, Sb07g006630
Functional annotation MBTB20 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
UniProt A0A1Z5R8N6
Pfam PF00651
Panther DB PTHR26379 PTHR26379:SF157
NCBI CDD -
KEGG Orthology K10523; speckle-type POZ protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G06190 : BTB-POZ and MATH domain 2
RAP-DB (Rice) LOC_Os08g13000.1 : MBTB20 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G148450 - -
2 Sobic.004G207766 - -
3 Sobic.009G246250 - -
4 Sobic.004G238801 - -
5 Sobic.001G136400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Desulfoglucosinolate sulfotransferase (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
6 Sobic.003G140800 expressed protein -
7 Sobic.010G190800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1680 domain containing protein, putative, expressed K09955: uncharacterized protein
8 Sobic.001G092800 acyl-CoA-binding domain-containing protein 6, putative, expressed -
9 Sobic.002G055800 zinc finger, C3HC4 type domain containing protein, expressed K16277: E3 ubiquitin-protein ligase DRIP
10 Sobic.006G202000 COBW domain containing protein, putative, expressed -
11 Sobic.005G024000 rhamnogalacturonate lyase, putative, expressed K18195: RGL4, rhamnogalacturonan endolyase
12 Sobic.003G157200 importin subunit alpha, putative, expressed -
13 Sobic.002G339732 - -
14 Sobic.002G240000 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
15 Sobic.006G208000 DNA repair ATPase-related, putative, expressed -
16 Sobic.009G060600 - -
17 Sobic.001G027500 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
18 Sobic.003G247000 OsMan01 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
19 Sobic.006G226000 expressed protein -
20 Sobic.002G135400 Cupin domain containing protein, expressed -


Gene co-expression network
sample Sobic007G082500 Sobic007G082500 Sobic001G148450 Sobic001G148450 Sobic007G082500--Sobic001G148450 Sobic004G207766 Sobic004G207766 Sobic007G082500--Sobic004G207766 Sobic009G246250 Sobic009G246250 Sobic007G082500--Sobic009G246250 Sobic004G238801 Sobic004G238801 Sobic007G082500--Sobic004G238801 Sobic001G136400 Sobic001G136400 Sobic007G082500--Sobic001G136400 Sobic003G140800 Sobic003G140800 Sobic007G082500--Sobic003G140800 Sobic010G190800 Sobic010G190800 Sobic007G082500--Sobic010G190800 Sobic001G092800 Sobic001G092800 Sobic007G082500--Sobic001G092800 Sobic002G055800 Sobic002G055800 Sobic007G082500--Sobic002G055800 Sobic006G172000 Sobic006G172000 Sobic001G148450--Sobic006G172000 Sobic001G148450--Sobic004G238801 Sobic010G178300 Sobic010G178300 Sobic001G148450--Sobic010G178300 Sobic001G148450--Sobic007G082500 Sobic006G041700 Sobic006G041700 Sobic001G148450--Sobic006G041700 Sobic003G251700 Sobic003G251700 Sobic001G148450--Sobic003G251700 Sobic001G148450--Sobic004G207766 Sobic004G330200 Sobic004G330200 Sobic001G148450--Sobic004G330200 Sobic002G175200 Sobic002G175200 Sobic001G148450--Sobic002G175200 Sobic001G104500 Sobic001G104500 Sobic004G207766--Sobic001G104500 Sobic006G226000 Sobic006G226000 Sobic004G207766--Sobic006G226000 Sobic006G135800 Sobic006G135800 Sobic004G207766--Sobic006G135800 Sobic004G207766--Sobic002G055800 Sobic003G084200 Sobic003G084200 Sobic004G207766--Sobic003G084200 Sobic004G207766--Sobic006G041700 Sobic004G282601 Sobic004G282601 Sobic004G207766--Sobic004G282601 Sobic002G256900 Sobic002G256900 Sobic004G207766--Sobic002G256900 Sobic004G207766--Sobic006G172000 Sobic008G149300 Sobic008G149300 Sobic009G246250--Sobic008G149300 Sobic001G122600 Sobic001G122600 Sobic009G246250--Sobic001G122600 Sobic007G121650 Sobic007G121650 Sobic004G238801--Sobic007G121650 Sobic004G238801--Sobic010G178300 Sobic005G157300 Sobic005G157300 Sobic004G238801--Sobic005G157300 Sobic010G204700 Sobic010G204700 Sobic004G238801--Sobic010G204700 Sobic002G272300 Sobic002G272300 Sobic004G238801--Sobic002G272300 Sobic004G238801--Sobic001G148450 Sobic001G377700 Sobic001G377700 Sobic004G238801--Sobic001G377700 Sobic003G320300 Sobic003G320300 Sobic004G238801--Sobic003G320300 Sobic001G439400 Sobic001G439400 Sobic004G238801--Sobic001G439400 Sobic009G014800 Sobic009G014800 Sobic001G136400--Sobic009G014800 Sobic009G012500 Sobic009G012500 Sobic001G136400--Sobic009G012500 Sobic001G203350 Sobic001G203350 Sobic001G136400--Sobic001G203350 Sobic010G053400 Sobic010G053400 Sobic001G136400--Sobic010G053400 Sobic002G240000 Sobic002G240000 Sobic001G136400--Sobic002G240000 Sobic001G136400--Sobic008G149300 Sobic001G136400--Sobic009G246250 Sobic006G083900 Sobic006G083900 Sobic001G136400--Sobic006G083900 Sobic002G197700 Sobic002G197700 Sobic001G136400--Sobic002G197700 Sobic010G074940 Sobic010G074940 Sobic003G140800--Sobic010G074940 Sobic001G544400 Sobic001G544400 Sobic003G140800--Sobic001G544400 Sobic002G393100 Sobic002G393100 Sobic003G140800--Sobic002G393100 Sobic003G140800--Sobic001G136400 Sobic001G380800 Sobic001G380800 Sobic003G140800--Sobic001G380800 Sobic004G164800 Sobic004G164800 Sobic003G140800--Sobic004G164800 Sobic005G147600 Sobic005G147600 Sobic003G140800--Sobic005G147600 Sobic004G301800 Sobic004G301800 Sobic003G140800--Sobic004G301800 Sobic001G208500 Sobic001G208500 Sobic003G140800--Sobic001G208500 Sobic009G002200 Sobic009G002200 Sobic010G190800--Sobic009G002200 Sobic003G317700 Sobic003G317700 Sobic010G190800--Sobic003G317700 Sobic010G087100 Sobic010G087100 Sobic010G190800--Sobic010G087100 Sobic005G036200 Sobic005G036200 Sobic010G190800--Sobic005G036200 Sobic004G078500 Sobic004G078500 Sobic010G190800--Sobic004G078500 Sobic001G456400 Sobic001G456400 Sobic010G190800--Sobic001G456400 Sobic001G242500 Sobic001G242500 Sobic010G190800--Sobic001G242500 Sobic004G190500 Sobic004G190500 Sobic010G190800--Sobic004G190500 Sobic001G081800 Sobic001G081800 Sobic010G190800--Sobic001G081800 Sobic005G021000 Sobic005G021000 Sobic001G092800--Sobic005G021000 Sobic001G092800--Sobic009G246250 Sobic001G092800--Sobic002G055800 Sobic006G095900 Sobic006G095900 Sobic001G092800--Sobic006G095900 Sobic002G266300 Sobic002G266300 Sobic001G092800--Sobic002G266300 Sobic001G092800--Sobic008G149300 Sobic006G208000 Sobic006G208000 Sobic001G092800--Sobic006G208000 Sobic001G393101 Sobic001G393101 Sobic001G092800--Sobic001G393101 Sobic001G261420 Sobic001G261420 Sobic001G092800--Sobic001G261420 Sobic004G123200 Sobic004G123200 Sobic002G055800--Sobic004G123200 Sobic002G055800--Sobic006G226000 Sobic002G055800--Sobic001G136400 Sobic001G366300 Sobic001G366300 Sobic002G055800--Sobic001G366300 Sobic003G001800 Sobic003G001800 Sobic002G055800--Sobic003G001800 Sobic002G055800--Sobic009G012500 Sobic002G055800--Sobic006G083900 Sobic002G055800--Sobic002G240000 Sobic004G142400 Sobic004G142400 Sobic002G055800--Sobic004G142400
Octagon: transcription factors


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