Gene annotation
Transcriptome id Sobic.003G247000.1
Synonym Sb03g030340
Functional annotation OsMan01 - Endo-Beta-Mannanase, expressed
UniProt C5XFX7
Pfam PF00150
Panther DB PTHR31451 PTHR31451:SF8
NCBI CDD -
KEGG Orthology K19355; mannan endo-1,4-beta-mannosidase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G66460 : Glycosyl hydrolase superfamily protein
RAP-DB (Rice) LOC_Os01g47400.1 : OsMan01 - Endo-Beta-Mannanase, expressed
MaizeGDB (Corn) Zm00025a028148
Brachypodium KQK09058
Barley HORVU3Hr1G060060.1 , HORVU3Hr1G060060.3 , HORVU3Hr1G060060.2 , HORVU3Hr1G060060.5 , HORVU3Hr1G060060.4 , HORVU3Hr1G060060.6 , HORVU3Hr1G060060.8 , HORVU3Hr1G060060.7
Wheat TraesCS3A02G241000 , TraesCS3B02G269200 , TraesCS3D02G241300 , TraesCS3D02G241300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G222400 expressed protein -
2 Sobic.001G136400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Desulfoglucosinolate sulfotransferase (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
3 Sobic.005G196600 expressed protein -
4 Sobic.002G055800 zinc finger, C3HC4 type domain containing protein, expressed K16277: E3 ubiquitin-protein ligase DRIP
5 Sobic.001G320000 OsSub61 - Putative Subtilisin homologue, expressed -
6 Sobic.007G160400 ZF-HD homeobox protein, putative, expressed -
7 Sobic.007G197500 expressed protein -
8 Sobic.002G374500 - -
9 Sobic.009G012500 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
10 Sobic.003G140800 expressed protein -
11 Sobic.006G135800 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.005G054900 acyl-CoA synthetase protein, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
13 Sobic.004G142400 ATP-binding region, ATPase-like domain containing protein, expressed -
14 Sobic.001G170301 - -
15 Sobic.010G256100 LTPL154 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.001G497700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@late embryogenesis abundant protein D-34, putative, expressed -
17 Sobic.010G007800 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@late embryogenesis abundant group 1, putative, expressed -
18 Sobic.003G215600 pleiotropic drug resistance protein, putative, expressed -
19 Sobic.001G366300 telomerase reverse transcriptase, putative, expressed K11126: TERT, telomerase reverse transcriptase
20 Sobic.009G104600 small hydrophilic plant seed protein, putative, expressed -


Gene co-expression network
sample Sobic003G247000 Sobic003G247000 Sobic009G222400 Sobic009G222400 Sobic003G247000--Sobic009G222400 Sobic001G136400 Sobic001G136400 Sobic003G247000--Sobic001G136400 Sobic005G196600 Sobic005G196600 Sobic003G247000--Sobic005G196600 Sobic002G055800 Sobic002G055800 Sobic003G247000--Sobic002G055800 Sobic001G320000 Sobic001G320000 Sobic003G247000--Sobic001G320000 Sobic007G160400 Sobic007G160400 Sobic003G247000--Sobic007G160400 Sobic007G197500 Sobic007G197500 Sobic003G247000--Sobic007G197500 Sobic002G374500 Sobic002G374500 Sobic003G247000--Sobic002G374500 Sobic009G012500 Sobic009G012500 Sobic003G247000--Sobic009G012500 Sobic009G222400--Sobic005G196600 Sobic009G002200 Sobic009G002200 Sobic009G222400--Sobic009G002200 Sobic005G153000 Sobic005G153000 Sobic009G222400--Sobic005G153000 Sobic002G112000 Sobic002G112000 Sobic009G222400--Sobic002G112000 Sobic010G037901 Sobic010G037901 Sobic009G222400--Sobic010G037901 Sobic009G222400--Sobic003G247000 Sobic004G282601 Sobic004G282601 Sobic009G222400--Sobic004G282601 Sobic007G187700 Sobic007G187700 Sobic009G222400--Sobic007G187700 Sobic005G157300 Sobic005G157300 Sobic009G222400--Sobic005G157300 Sobic009G014800 Sobic009G014800 Sobic001G136400--Sobic009G014800 Sobic001G136400--Sobic009G012500 Sobic001G203350 Sobic001G203350 Sobic001G136400--Sobic001G203350 Sobic010G053400 Sobic010G053400 Sobic001G136400--Sobic010G053400 Sobic002G240000 Sobic002G240000 Sobic001G136400--Sobic002G240000 Sobic008G149300 Sobic008G149300 Sobic001G136400--Sobic008G149300 Sobic009G246250 Sobic009G246250 Sobic001G136400--Sobic009G246250 Sobic006G083900 Sobic006G083900 Sobic001G136400--Sobic006G083900 Sobic002G197700 Sobic002G197700 Sobic001G136400--Sobic002G197700 Sobic005G196600--Sobic010G037901 Sobic005G196600--Sobic005G153000 Sobic006G226000 Sobic006G226000 Sobic005G196600--Sobic006G226000 Sobic005G196600--Sobic004G282601 Sobic003G086800 Sobic003G086800 Sobic005G196600--Sobic003G086800 Sobic009G031800 Sobic009G031800 Sobic005G196600--Sobic009G031800 Sobic005G196600--Sobic001G136400 Sobic005G196600--Sobic002G055800 Sobic006G135800 Sobic006G135800 Sobic005G196600--Sobic006G135800 Sobic004G123200 Sobic004G123200 Sobic002G055800--Sobic004G123200 Sobic002G055800--Sobic006G226000 Sobic002G055800--Sobic001G136400 Sobic001G366300 Sobic001G366300 Sobic002G055800--Sobic001G366300 Sobic003G001800 Sobic003G001800 Sobic002G055800--Sobic003G001800 Sobic002G055800--Sobic009G012500 Sobic002G055800--Sobic006G083900 Sobic002G055800--Sobic002G240000 Sobic004G142400 Sobic004G142400 Sobic002G055800--Sobic004G142400 Sobic007G097100 Sobic007G097100 Sobic001G320000--Sobic007G097100 Sobic001G320000--Sobic007G160400 Sobic001G493100 Sobic001G493100 Sobic001G320000--Sobic001G493100 Sobic010G214800 Sobic010G214800 Sobic001G320000--Sobic010G214800 Sobic001G320000--Sobic009G031800 Sobic001G320000--Sobic006G226000 Sobic001G320000--Sobic002G055800 Sobic001G320000--Sobic006G135800 Sobic001G320000--Sobic004G142400 Sobic007G160400--Sobic004G142400 Sobic007G160400--Sobic006G226000 Sobic005G126701 Sobic005G126701 Sobic007G160400--Sobic005G126701 Sobic007G160400--Sobic006G083900 Sobic007G008500 Sobic007G008500 Sobic007G160400--Sobic007G008500 Sobic007G160400--Sobic003G086800 Sobic007G160400--Sobic009G012500 Sobic007G160400--Sobic009G031800 Sobic010G110100 Sobic010G110100 Sobic007G160400--Sobic010G110100 Sobic010G256100 Sobic010G256100 Sobic007G197500--Sobic010G256100 Sobic001G498900 Sobic001G498900 Sobic007G197500--Sobic001G498900 Sobic005G165700 Sobic005G165700 Sobic007G197500--Sobic005G165700 Sobic007G197500--Sobic002G374500 Sobic007G197500--Sobic007G008500 Sobic004G091600 Sobic004G091600 Sobic007G197500--Sobic004G091600 Sobic010G007800 Sobic010G007800 Sobic007G197500--Sobic010G007800 Sobic001G164800 Sobic001G164800 Sobic007G197500--Sobic001G164800 Sobic005G167650 Sobic005G167650 Sobic007G197500--Sobic005G167650 Sobic002G374500--Sobic010G256100 Sobic009G104500 Sobic009G104500 Sobic002G374500--Sobic009G104500 Sobic002G374500--Sobic005G165700 Sobic002G374500--Sobic010G007800 Sobic003G061500 Sobic003G061500 Sobic002G374500--Sobic003G061500 Sobic002G374500--Sobic004G091600 Sobic007G218500 Sobic007G218500 Sobic002G374500--Sobic007G218500 Sobic002G374500--Sobic007G197500 Sobic002G374500--Sobic001G498900 Sobic006G217800 Sobic006G217800 Sobic009G012500--Sobic006G217800 Sobic009G012500--Sobic006G083900 Sobic009G012500--Sobic007G008500 Sobic001G393101 Sobic001G393101 Sobic009G012500--Sobic001G393101 Sobic009G012500--Sobic008G149300 Sobic001G166900 Sobic001G166900 Sobic009G012500--Sobic001G166900 Sobic003G443400 Sobic003G443400 Sobic009G012500--Sobic003G443400 Sobic001G534200 Sobic001G534200 Sobic009G012500--Sobic001G534200 Sobic007G025600 Sobic007G025600 Sobic009G012500--Sobic007G025600
Octagon: transcription factors


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