Gene annotation
Transcriptome id Sobic.001G320000.1
Synonym Sb01g031090, SDD1
Functional annotation OsSub61 - Putative Subtilisin homologue, expressed
UniProt H0I4F2 , C5WUK7
Pfam PF05922 PF02225 PF00082
Panther DB PTHR10795 PTHR10795:SF428
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004252serine-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT1G04110 : Subtilase family protein
RAP-DB (Rice) LOC_Os10g38080.1 : OsSub61 - Putative Subtilisin homologue, expressed
MaizeGDB (Corn) Zm00025a000258 , Zm00025a003096 , Zm00025a053517
Brachypodium KQJ97539 , KQK23956
Barley HORVU4Hr1G085590.3 , HORVU4Hr1G085590.2 , HORVU4Hr1G085590.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G097100 aspartic proteinase nepenthesin precursor, putative, expressed -
2 Sobic.007G160400 ZF-HD homeobox protein, putative, expressed -
3 Sobic.001G493100 LTPL82 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.010G214800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@membrane associated DUF588 domain containing protein, putative, expressed -
5 Sobic.009G031800 - -
6 Sobic.006G226000 expressed protein -
7 Sobic.002G055800 zinc finger, C3HC4 type domain containing protein, expressed K16277: E3 ubiquitin-protein ligase DRIP
8 Sobic.006G135800 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.004G142400 ATP-binding region, ATPase-like domain containing protein, expressed -
10 Sobic.006G172000 pectinesterase, putative, expressed -
11 Sobic.010G037901 - -
12 Sobic.005G054900 acyl-CoA synthetase protein, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
13 Sobic.001G366300 telomerase reverse transcriptase, putative, expressed K11126: TERT, telomerase reverse transcriptase
14 Sobic.004G123200 MYB family transcription factor, putative, expressed -
15 Sobic.010G110100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@"A transcription factor(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659933)@transcription factor, putative, expressed K14431: transcription factor TGA
16 Sobic.005G126701 - -
17 Sobic.003G086800 ZOS1-02 - C2H2 zinc finger protein, expressed -
18 Sobic.001G136400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Desulfoglucosinolate sulfotransferase (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
19 Sobic.009G012500 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
20 Sobic.002G240000 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase


Gene co-expression network
sample Sobic001G320000 Sobic001G320000 Sobic007G097100 Sobic007G097100 Sobic001G320000--Sobic007G097100 Sobic007G160400 Sobic007G160400 Sobic001G320000--Sobic007G160400 Sobic001G493100 Sobic001G493100 Sobic001G320000--Sobic001G493100 Sobic010G214800 Sobic010G214800 Sobic001G320000--Sobic010G214800 Sobic009G031800 Sobic009G031800 Sobic001G320000--Sobic009G031800 Sobic006G226000 Sobic006G226000 Sobic001G320000--Sobic006G226000 Sobic002G055800 Sobic002G055800 Sobic001G320000--Sobic002G055800 Sobic006G135800 Sobic006G135800 Sobic001G320000--Sobic006G135800 Sobic004G142400 Sobic004G142400 Sobic001G320000--Sobic004G142400 Sobic006G172000 Sobic006G172000 Sobic007G097100--Sobic006G172000 Sobic007G097100--Sobic001G320000 Sobic007G097100--Sobic001G493100 Sobic007G097100--Sobic004G142400 Sobic007G097100--Sobic007G160400 Sobic007G097100--Sobic006G226000 Sobic003G350400 Sobic003G350400 Sobic007G097100--Sobic003G350400 Sobic007G097100--Sobic006G135800 Sobic006G041700 Sobic006G041700 Sobic007G097100--Sobic006G041700 Sobic007G160400--Sobic004G142400 Sobic007G160400--Sobic006G226000 Sobic005G126701 Sobic005G126701 Sobic007G160400--Sobic005G126701 Sobic006G083900 Sobic006G083900 Sobic007G160400--Sobic006G083900 Sobic007G008500 Sobic007G008500 Sobic007G160400--Sobic007G008500 Sobic003G086800 Sobic003G086800 Sobic007G160400--Sobic003G086800 Sobic009G012500 Sobic009G012500 Sobic007G160400--Sobic009G012500 Sobic007G160400--Sobic009G031800 Sobic010G110100 Sobic010G110100 Sobic007G160400--Sobic010G110100 Sobic001G493100--Sobic006G172000 Sobic001G493100--Sobic006G135800 Sobic001G493100--Sobic006G226000 Sobic001G493100--Sobic006G041700 Sobic006G197400 Sobic006G197400 Sobic001G493100--Sobic006G197400 Sobic001G493100--Sobic007G160400 Sobic010G037901 Sobic010G037901 Sobic001G493100--Sobic010G037901 Sobic001G493100--Sobic003G086800 Sobic001G493100--Sobic009G031800 Sobic010G214800--Sobic001G320000 Sobic010G214800--Sobic001G493100 Sobic010G214800--Sobic009G031800 Sobic010G214800--Sobic007G160400 Sobic010G214800--Sobic006G226000 Sobic002G010000 Sobic002G010000 Sobic010G214800--Sobic002G010000 Sobic005G054900 Sobic005G054900 Sobic010G214800--Sobic005G054900 Sobic004G291200 Sobic004G291200 Sobic010G214800--Sobic004G291200 Sobic010G214800--Sobic007G097100 Sobic009G031800--Sobic006G226000 Sobic009G031800--Sobic007G160400 Sobic009G031800--Sobic010G037901 Sobic009G031800--Sobic009G012500 Sobic009G031800--Sobic005G126701 Sobic001G254700 Sobic001G254700 Sobic009G031800--Sobic001G254700 Sobic009G031800--Sobic006G083900 Sobic007G025600 Sobic007G025600 Sobic009G031800--Sobic007G025600 Sobic001G534200 Sobic001G534200 Sobic009G031800--Sobic001G534200 Sobic006G226000--Sobic009G031800 Sobic006G226000--Sobic007G160400 Sobic006G226000--Sobic010G037901 Sobic006G226000--Sobic002G055800 Sobic002G256900 Sobic002G256900 Sobic006G226000--Sobic002G256900 Sobic004G123200 Sobic004G123200 Sobic006G226000--Sobic004G123200 Sobic006G226000--Sobic003G086800 Sobic002G240000 Sobic002G240000 Sobic006G226000--Sobic002G240000 Sobic001G136400 Sobic001G136400 Sobic006G226000--Sobic001G136400 Sobic002G055800--Sobic004G123200 Sobic002G055800--Sobic006G226000 Sobic002G055800--Sobic001G136400 Sobic001G366300 Sobic001G366300 Sobic002G055800--Sobic001G366300 Sobic003G001800 Sobic003G001800 Sobic002G055800--Sobic003G001800 Sobic002G055800--Sobic009G012500 Sobic002G055800--Sobic006G083900 Sobic002G055800--Sobic002G240000 Sobic002G055800--Sobic004G142400 Sobic006G135800--Sobic001G493100 Sobic006G135800--Sobic010G037901 Sobic006G135800--Sobic006G226000 Sobic006G135800--Sobic006G172000 Sobic009G002200 Sobic009G002200 Sobic006G135800--Sobic009G002200 Sobic005G153000 Sobic005G153000 Sobic006G135800--Sobic005G153000 Sobic007G192200 Sobic007G192200 Sobic006G135800--Sobic007G192200 Sobic006G135800--Sobic009G031800 Sobic006G135800--Sobic007G160400 Sobic004G142400--Sobic007G160400 Sobic004G142400--Sobic006G083900 Sobic004G142400--Sobic005G126701 Sobic003G434300 Sobic003G434300 Sobic004G142400--Sobic003G434300 Sobic008G018100 Sobic008G018100 Sobic004G142400--Sobic008G018100 Sobic004G142400--Sobic010G110100 Sobic006G234433 Sobic006G234433 Sobic004G142400--Sobic006G234433 Sobic004G142400--Sobic007G008500 Sobic004G091600 Sobic004G091600 Sobic004G142400--Sobic004G091600
Octagon: transcription factors


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