Gene annotation
Transcriptome id Sobic.002G374500.1
Synonym Sb02g039220
Functional annotation -
UniProt C5XE13
Pfam -
Panther DB PTHR37256 PTHR37256:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G21280 : hydroxyproline-rich glycoprotein family protein
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a015212
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G256100 LTPL154 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.009G104500 small hydrophilic plant seed protein, putative, expressed -
3 Sobic.005G165700 AMBP1 - Antimicrobial peptide MBP-1 family protein precursor, expressed -
4 Sobic.010G007800 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@late embryogenesis abundant group 1, putative, expressed -
5 Sobic.003G061500 small hydrophilic plant seed protein, putative, expressed -
6 Sobic.004G091600 ethylene receptor, putative, expressed K14509: ETR, ethylene receptor
7 Sobic.007G218500 (50.9% identity with SbCCoAOMT/68.5% similarity)(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed K18883: tricin synthase
8 Sobic.007G197500 expressed protein -
9 Sobic.001G498900 expressed protein -
10 Sobic.009G104600 small hydrophilic plant seed protein, putative, expressed -
11 Sobic.007G008500 basic helix-loop-helix family protein, putative, expressed -
12 Sobic.001G497700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@late embryogenesis abundant protein D-34, putative, expressed -
13 Sobic.005G167650 - -
14 Sobic.002G046000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
15 Sobic.004G142400 ATP-binding region, ATPase-like domain containing protein, expressed -
16 Sobic.009G037100 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed -
17 Sobic.006G248000 polyprenyl synthetase, putative, expressed K00787: farnesyl diphosphate synthase
18 Sobic.003G144500 Up-reguralion under drought(PubMedID : 24916767)@mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
19 Sobic.002G401400 glyoxalase family protein, putative, expressed -
20 Sobic.001G126900 oleosin, putative, expressed -


Gene co-expression network
sample Sobic002G374500 Sobic002G374500 Sobic010G256100 Sobic010G256100 Sobic002G374500--Sobic010G256100 Sobic009G104500 Sobic009G104500 Sobic002G374500--Sobic009G104500 Sobic005G165700 Sobic005G165700 Sobic002G374500--Sobic005G165700 Sobic010G007800 Sobic010G007800 Sobic002G374500--Sobic010G007800 Sobic003G061500 Sobic003G061500 Sobic002G374500--Sobic003G061500 Sobic004G091600 Sobic004G091600 Sobic002G374500--Sobic004G091600 Sobic007G218500 Sobic007G218500 Sobic002G374500--Sobic007G218500 Sobic007G197500 Sobic007G197500 Sobic002G374500--Sobic007G197500 Sobic001G498900 Sobic001G498900 Sobic002G374500--Sobic001G498900 Sobic010G256100--Sobic003G061500 Sobic010G256100--Sobic004G091600 Sobic010G256100--Sobic009G104500 Sobic010G256100--Sobic007G218500 Sobic002G046000 Sobic002G046000 Sobic010G256100--Sobic002G046000 Sobic004G349550 Sobic004G349550 Sobic010G256100--Sobic004G349550 Sobic010G256100--Sobic005G165700 Sobic007G008500 Sobic007G008500 Sobic010G256100--Sobic007G008500 Sobic003G443400 Sobic003G443400 Sobic010G256100--Sobic003G443400 Sobic009G104500--Sobic007G218500 Sobic009G104500--Sobic010G007800 Sobic003G144500 Sobic003G144500 Sobic009G104500--Sobic003G144500 Sobic002G401400 Sobic002G401400 Sobic009G104500--Sobic002G401400 Sobic009G104500--Sobic005G165700 Sobic001G497700 Sobic001G497700 Sobic009G104500--Sobic001G497700 Sobic001G126900 Sobic001G126900 Sobic009G104500--Sobic001G126900 Sobic009G104600 Sobic009G104600 Sobic009G104500--Sobic009G104600 Sobic008G159000 Sobic008G159000 Sobic009G104500--Sobic008G159000 Sobic005G165700--Sobic001G498900 Sobic009G037100 Sobic009G037100 Sobic005G165700--Sobic009G037100 Sobic001G058800 Sobic001G058800 Sobic005G165700--Sobic001G058800 Sobic005G165700--Sobic002G046000 Sobic004G164800 Sobic004G164800 Sobic005G165700--Sobic004G164800 Sobic006G248000 Sobic006G248000 Sobic005G165700--Sobic006G248000 Sobic003G372600 Sobic003G372600 Sobic005G165700--Sobic003G372600 Sobic005G165700--Sobic003G144500 Sobic010G198900 Sobic010G198900 Sobic005G165700--Sobic010G198900 Sobic010G007800--Sobic009G104500 Sobic010G007800--Sobic001G497700 Sobic010G007800--Sobic009G104600 Sobic010G007800--Sobic007G218500 Sobic010G007800--Sobic004G091600 Sobic002G185100 Sobic002G185100 Sobic010G007800--Sobic002G185100 Sobic010G007800--Sobic003G144500 Sobic005G167650 Sobic005G167650 Sobic010G007800--Sobic005G167650 Sobic010G007800--Sobic005G165700 Sobic003G061500--Sobic004G349550 Sobic003G061500--Sobic004G091600 Sobic005G184700 Sobic005G184700 Sobic003G061500--Sobic005G184700 Sobic005G184800 Sobic005G184800 Sobic003G061500--Sobic005G184800 Sobic003G061500--Sobic002G046000 Sobic001G344300 Sobic001G344300 Sobic003G061500--Sobic001G344300 Sobic008G149300 Sobic008G149300 Sobic003G061500--Sobic008G149300 Sobic001G166900 Sobic001G166900 Sobic003G061500--Sobic001G166900 Sobic001G165600 Sobic001G165600 Sobic003G061500--Sobic001G165600 Sobic004G091600--Sobic007G218500 Sobic004G091600--Sobic005G167650 Sobic004G091600--Sobic003G061500 Sobic004G091600--Sobic009G104500 Sobic004G091600--Sobic002G046000 Sobic004G091600--Sobic004G349550 Sobic009G103800 Sobic009G103800 Sobic004G091600--Sobic009G103800 Sobic004G091600--Sobic001G344300 Sobic004G091600--Sobic010G007800 Sobic007G218500--Sobic009G104500 Sobic007G218500--Sobic008G159000 Sobic007G218500--Sobic002G046000 Sobic007G218500--Sobic001G344300 Sobic002G184700 Sobic002G184700 Sobic007G218500--Sobic002G184700 Sobic007G218500--Sobic009G037100 Sobic007G218500--Sobic003G372600 Sobic007G218500--Sobic002G401400 Sobic007G218500--Sobic005G165700 Sobic007G197500--Sobic010G256100 Sobic007G197500--Sobic001G498900 Sobic007G197500--Sobic005G165700 Sobic007G197500--Sobic002G374500 Sobic007G197500--Sobic007G008500 Sobic007G197500--Sobic004G091600 Sobic007G197500--Sobic010G007800 Sobic001G164800 Sobic001G164800 Sobic007G197500--Sobic001G164800 Sobic007G197500--Sobic005G167650 Sobic001G498900--Sobic006G248000 Sobic001G498900--Sobic005G165700 Sobic001G498900--Sobic010G198900 Sobic002G211300 Sobic002G211300 Sobic001G498900--Sobic002G211300 Sobic001G498900--Sobic009G037100 Sobic010G125000 Sobic010G125000 Sobic001G498900--Sobic010G125000 Sobic001G498900--Sobic003G372600 Sobic001G498900--Sobic002G046000 Sobic001G498900--Sobic007G008500
Octagon: transcription factors


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