Gene annotation
Transcriptome id Sobic.001G027500.1
Synonym Sb01g002600
Functional annotation haloacid dehalogenase-like hydrolase family protein, putative, expressed
UniProt C5WU26
Pfam -
Panther DB PTHR12725 PTHR12725:SF49
NCBI CDD KOG3109; Haloacid dehalogenase-like hydrolase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G02230 : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
RAP-DB (Rice) LOC_Os01g74152.1 : haloacid dehalogenase-like hydrolase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a008893
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G257000 two-component response regulator, putative, expressed -
2 Sobic.002G168000 expressed protein -
3 Sobic.008G063600 glycosyl hydrolase family protein 27, putative, expressed -
4 Sobic.004G222200 - -
5 Sobic.006G226000 expressed protein -
6 Sobic.006G262501 - -
7 Sobic.002G055800 zinc finger, C3HC4 type domain containing protein, expressed K16277: E3 ubiquitin-protein ligase DRIP
8 Sobic.007G187700 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
9 Sobic.005G153000 agenet domain containing protein, expressed -
10 Sobic.004G123200 MYB family transcription factor, putative, expressed -
11 Sobic.003G129500 argonaute, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
12 Sobic.005G196600 expressed protein -
13 Sobic.002G240500 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
14 Sobic.009G177200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
15 Sobic.003G251700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed K14486: K14486, auxin response factor
16 Sobic.006G202000 COBW domain containing protein, putative, expressed -
17 Sobic.009G188900 acyltransferase, putative, expressed K13513: LCLAT1, lysocardiolipin and lysophospholipid acyltransferase
18 Sobic.001G148450 - -
19 Sobic.010G037901 - -
20 Sobic.001G493100 LTPL82 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic001G027500 Sobic001G027500 Sobic010G257000 Sobic010G257000 Sobic001G027500--Sobic010G257000 Sobic002G168000 Sobic002G168000 Sobic001G027500--Sobic002G168000 Sobic008G063600 Sobic008G063600 Sobic001G027500--Sobic008G063600 Sobic004G222200 Sobic004G222200 Sobic001G027500--Sobic004G222200 Sobic006G226000 Sobic006G226000 Sobic001G027500--Sobic006G226000 Sobic006G262501 Sobic006G262501 Sobic001G027500--Sobic006G262501 Sobic002G055800 Sobic002G055800 Sobic001G027500--Sobic002G055800 Sobic007G187700 Sobic007G187700 Sobic001G027500--Sobic007G187700 Sobic005G153000 Sobic005G153000 Sobic001G027500--Sobic005G153000 Sobic009G188900 Sobic009G188900 Sobic010G257000--Sobic009G188900 Sobic010G175000 Sobic010G175000 Sobic010G257000--Sobic010G175000 Sobic010G257000--Sobic002G168000 Sobic009G224300 Sobic009G224300 Sobic010G257000--Sobic009G224300 Sobic010G257000--Sobic001G027500 Sobic008G048966 Sobic008G048966 Sobic010G257000--Sobic008G048966 Sobic006G281900 Sobic006G281900 Sobic010G257000--Sobic006G281900 Sobic010G250400 Sobic010G250400 Sobic010G257000--Sobic010G250400 Sobic006G016700 Sobic006G016700 Sobic010G257000--Sobic006G016700 Sobic002G168000--Sobic007G187700 Sobic002G168000--Sobic005G153000 Sobic002G021200 Sobic002G021200 Sobic002G168000--Sobic002G021200 Sobic002G168000--Sobic006G281900 Sobic006G275500 Sobic006G275500 Sobic002G168000--Sobic006G275500 Sobic002G168000--Sobic009G188900 Sobic009G077300 Sobic009G077300 Sobic002G168000--Sobic009G077300 Sobic002G168000--Sobic006G016700 Sobic001G104500 Sobic001G104500 Sobic002G168000--Sobic001G104500 Sobic008G063600--Sobic001G027500 Sobic008G063600--Sobic002G168000 Sobic009G012600 Sobic009G012600 Sobic008G063600--Sobic009G012600 Sobic003G396700 Sobic003G396700 Sobic008G063600--Sobic003G396700 Sobic009G045300 Sobic009G045300 Sobic008G063600--Sobic009G045300 Sobic003G188600 Sobic003G188600 Sobic008G063600--Sobic003G188600 Sobic003G129500 Sobic003G129500 Sobic008G063600--Sobic003G129500 Sobic008G045000 Sobic008G045000 Sobic008G063600--Sobic008G045000 Sobic008G063600--Sobic009G188900 Sobic004G222150 Sobic004G222150 Sobic004G222200--Sobic004G222150 Sobic002G144600 Sobic002G144600 Sobic004G222200--Sobic002G144600 Sobic004G123200 Sobic004G123200 Sobic004G222200--Sobic004G123200 Sobic004G222200--Sobic010G250400 Sobic004G222200--Sobic002G055800 Sobic008G046200 Sobic008G046200 Sobic004G222200--Sobic008G046200 Sobic004G222200--Sobic005G153000 Sobic004G222200--Sobic006G226000 Sobic003G001800 Sobic003G001800 Sobic004G222200--Sobic003G001800 Sobic009G031800 Sobic009G031800 Sobic006G226000--Sobic009G031800 Sobic007G160400 Sobic007G160400 Sobic006G226000--Sobic007G160400 Sobic010G037901 Sobic010G037901 Sobic006G226000--Sobic010G037901 Sobic006G226000--Sobic002G055800 Sobic002G256900 Sobic002G256900 Sobic006G226000--Sobic002G256900 Sobic006G226000--Sobic004G123200 Sobic003G086800 Sobic003G086800 Sobic006G226000--Sobic003G086800 Sobic002G240000 Sobic002G240000 Sobic006G226000--Sobic002G240000 Sobic001G136400 Sobic001G136400 Sobic006G226000--Sobic001G136400 Sobic005G045700 Sobic005G045700 Sobic006G262501--Sobic005G045700 Sobic002G127900 Sobic002G127900 Sobic006G262501--Sobic002G127900 Sobic005G036200 Sobic005G036200 Sobic006G262501--Sobic005G036200 Sobic008G118100 Sobic008G118100 Sobic006G262501--Sobic008G118100 Sobic003G368901 Sobic003G368901 Sobic006G262501--Sobic003G368901 Sobic006G262501--Sobic009G012600 Sobic007G050800 Sobic007G050800 Sobic006G262501--Sobic007G050800 Sobic005G139300 Sobic005G139300 Sobic006G262501--Sobic005G139300 Sobic006G262501--Sobic010G175000 Sobic002G055800--Sobic004G123200 Sobic002G055800--Sobic006G226000 Sobic002G055800--Sobic001G136400 Sobic001G366300 Sobic001G366300 Sobic002G055800--Sobic001G366300 Sobic002G055800--Sobic003G001800 Sobic009G012500 Sobic009G012500 Sobic002G055800--Sobic009G012500 Sobic006G083900 Sobic006G083900 Sobic002G055800--Sobic006G083900 Sobic002G055800--Sobic002G240000 Sobic004G142400 Sobic004G142400 Sobic002G055800--Sobic004G142400 Sobic007G187700--Sobic002G168000 Sobic007G187700--Sobic002G021200 Sobic007G187700--Sobic005G153000 Sobic007G187700--Sobic001G104500 Sobic001G377700 Sobic001G377700 Sobic007G187700--Sobic001G377700 Sobic007G187700--Sobic006G275500 Sobic004G317000 Sobic004G317000 Sobic007G187700--Sobic004G317000 Sobic004G282601 Sobic004G282601 Sobic007G187700--Sobic004G282601 Sobic007G187700--Sobic009G077300 Sobic005G153000--Sobic009G077300 Sobic005G153000--Sobic002G168000 Sobic005G153000--Sobic004G282601 Sobic005G153000--Sobic010G037901 Sobic003G290400 Sobic003G290400 Sobic005G153000--Sobic003G290400 Sobic005G153000--Sobic007G187700 Sobic006G221300 Sobic006G221300 Sobic005G153000--Sobic006G221300 Sobic005G153000--Sobic003G129500 Sobic005G196600 Sobic005G196600 Sobic005G153000--Sobic005G196600
Octagon: transcription factors


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