Gene annotation
Transcriptome id Sobic.008G063600.1
Synonym
Functional annotation glycosyl hydrolase family protein 27, putative, expressed
UniProt A0A1B6PBR7
Pfam PF16499
Panther DB PTHR11452 PTHR11452:SF14
NCBI CDD KOG2366; Alpha-D-galactosidase (melibiase)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G26380 : Melibiase family protein
RAP-DB (Rice) LOC_Os01g33420.1 : glycosyl hydrolase family protein 27, putative, expressed
MaizeGDB (Corn) Zm00025a054172
Brachypodium PNT70541
Barley -
Wheat TraesCS6D02G199600 , TraesCS6D02G199600 , TraesCS6A02G215900 , TraesCS6A02G215900 , TraesCS6B02G247000
Populus -


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cDNA sequences
Sobic.008G063600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G027500 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
2 Sobic.002G168000 expressed protein -
3 Sobic.009G012600 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
4 Sobic.003G396700 DCL2, putative, expressed K11592: DICER1, endoribonuclease Dicer
5 Sobic.009G045300 OsFBL21 - F-box domain and LRR containing protein, expressed K14485: transport inhibitor response 1
6 Sobic.003G188600 expressed protein -
7 Sobic.003G129500 argonaute, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
8 Sobic.008G045000 expressed protein -
9 Sobic.009G188900 acyltransferase, putative, expressed K13513: LCLAT1, lysocardiolipin and lysophospholipid acyltransferase
10 Sobic.004G240000 phosphoenolpyruvate carboxylase kinase, putative, expressed -
11 Sobic.007G187700 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
12 Sobic.002G039800 EDM2, putative, expressed -
13 Sobic.004G177600 DDT domain containing protein, putative, expressed -
14 Sobic.001G397800 TOPBP1C - Similar to DNA replication protein TOPBP1 from, expressed K10728: topoisomerase (DNA) II binding protein 1
15 Sobic.005G153000 agenet domain containing protein, expressed -
16 Sobic.009G177200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
17 Sobic.006G236000 DNA-directed RNA polymerase subunit, putative, expressed K16252: NRPD2, DNA-directed RNA polymerase IV and V subunit 2
18 Sobic.006G262501 - -
19 Sobic.004G215900 S1 RNA binding domain containing protein, expressed K00962: pnp, polyribonucleotide nucleotidyltransferase
20 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -


Gene co-expression network
sample Sobic008G063600 Sobic008G063600 Sobic001G027500 Sobic001G027500 Sobic008G063600--Sobic001G027500 Sobic002G168000 Sobic002G168000 Sobic008G063600--Sobic002G168000 Sobic009G012600 Sobic009G012600 Sobic008G063600--Sobic009G012600 Sobic003G396700 Sobic003G396700 Sobic008G063600--Sobic003G396700 Sobic009G045300 Sobic009G045300 Sobic008G063600--Sobic009G045300 Sobic003G188600 Sobic003G188600 Sobic008G063600--Sobic003G188600 Sobic003G129500 Sobic003G129500 Sobic008G063600--Sobic003G129500 Sobic008G045000 Sobic008G045000 Sobic008G063600--Sobic008G045000 Sobic009G188900 Sobic009G188900 Sobic008G063600--Sobic009G188900 Sobic010G257000 Sobic010G257000 Sobic001G027500--Sobic010G257000 Sobic001G027500--Sobic002G168000 Sobic001G027500--Sobic008G063600 Sobic004G222200 Sobic004G222200 Sobic001G027500--Sobic004G222200 Sobic006G226000 Sobic006G226000 Sobic001G027500--Sobic006G226000 Sobic006G262501 Sobic006G262501 Sobic001G027500--Sobic006G262501 Sobic002G055800 Sobic002G055800 Sobic001G027500--Sobic002G055800 Sobic007G187700 Sobic007G187700 Sobic001G027500--Sobic007G187700 Sobic005G153000 Sobic005G153000 Sobic001G027500--Sobic005G153000 Sobic002G168000--Sobic007G187700 Sobic002G168000--Sobic005G153000 Sobic002G021200 Sobic002G021200 Sobic002G168000--Sobic002G021200 Sobic006G281900 Sobic006G281900 Sobic002G168000--Sobic006G281900 Sobic006G275500 Sobic006G275500 Sobic002G168000--Sobic006G275500 Sobic002G168000--Sobic009G188900 Sobic009G077300 Sobic009G077300 Sobic002G168000--Sobic009G077300 Sobic006G016700 Sobic006G016700 Sobic002G168000--Sobic006G016700 Sobic001G104500 Sobic001G104500 Sobic002G168000--Sobic001G104500 Sobic007G050800 Sobic007G050800 Sobic009G012600--Sobic007G050800 Sobic005G045700 Sobic005G045700 Sobic009G012600--Sobic005G045700 Sobic009G012600--Sobic006G226000 Sobic007G192200 Sobic007G192200 Sobic009G012600--Sobic007G192200 Sobic009G002200 Sobic009G002200 Sobic009G012600--Sobic009G002200 Sobic005G036200 Sobic005G036200 Sobic009G012600--Sobic005G036200 Sobic010G037901 Sobic010G037901 Sobic009G012600--Sobic010G037901 Sobic009G012600--Sobic006G262501 Sobic008G191850 Sobic008G191850 Sobic009G012600--Sobic008G191850 Sobic003G396700--Sobic003G129500 Sobic003G388000 Sobic003G388000 Sobic003G396700--Sobic003G388000 Sobic003G396700--Sobic008G063600 Sobic002G043000 Sobic002G043000 Sobic003G396700--Sobic002G043000 Sobic006G192332 Sobic006G192332 Sobic003G396700--Sobic006G192332 Sobic008G111600 Sobic008G111600 Sobic003G396700--Sobic008G111600 Sobic002G426100 Sobic002G426100 Sobic003G396700--Sobic002G426100 Sobic006G181800 Sobic006G181800 Sobic003G396700--Sobic006G181800 Sobic002G078100 Sobic002G078100 Sobic003G396700--Sobic002G078100 Sobic004G330600 Sobic004G330600 Sobic009G045300--Sobic004G330600 Sobic008G052300 Sobic008G052300 Sobic009G045300--Sobic008G052300 Sobic010G175000 Sobic010G175000 Sobic009G045300--Sobic010G175000 Sobic009G045300--Sobic009G012600 Sobic009G045300--Sobic009G188900 Sobic009G045300--Sobic006G016700 Sobic009G045300--Sobic006G275500 Sobic003G104100 Sobic003G104100 Sobic009G045300--Sobic003G104100 Sobic005G163400 Sobic005G163400 Sobic009G045300--Sobic005G163400 Sobic001G242500 Sobic001G242500 Sobic003G188600--Sobic001G242500 Sobic002G112000 Sobic002G112000 Sobic003G188600--Sobic002G112000 Sobic003G370300 Sobic003G370300 Sobic003G188600--Sobic003G370300 Sobic002G317700 Sobic002G317700 Sobic003G188600--Sobic002G317700 Sobic003G259300 Sobic003G259300 Sobic003G188600--Sobic003G259300 Sobic007G121650 Sobic007G121650 Sobic003G188600--Sobic007G121650 Sobic003G188600--Sobic008G063600 Sobic002G335500 Sobic002G335500 Sobic003G188600--Sobic002G335500 Sobic004G078500 Sobic004G078500 Sobic003G188600--Sobic004G078500 Sobic003G129500--Sobic005G153000 Sobic003G129500--Sobic002G112000 Sobic003G129500--Sobic002G168000 Sobic009G012400 Sobic009G012400 Sobic003G129500--Sobic009G012400 Sobic010G250400 Sobic010G250400 Sobic003G129500--Sobic010G250400 Sobic003G423800 Sobic003G423800 Sobic003G129500--Sobic003G423800 Sobic003G129500--Sobic003G370300 Sobic010G222800 Sobic010G222800 Sobic003G129500--Sobic010G222800 Sobic003G183466 Sobic003G183466 Sobic003G129500--Sobic003G183466 Sobic007G161600 Sobic007G161600 Sobic008G045000--Sobic007G161600 Sobic009G216500 Sobic009G216500 Sobic008G045000--Sobic009G216500 Sobic009G259900 Sobic009G259900 Sobic008G045000--Sobic009G259900 Sobic006G179300 Sobic006G179300 Sobic008G045000--Sobic006G179300 Sobic003G177000 Sobic003G177000 Sobic008G045000--Sobic003G177000 Sobic009G177200 Sobic009G177200 Sobic008G045000--Sobic009G177200 Sobic003G072500 Sobic003G072500 Sobic008G045000--Sobic003G072500 Sobic001G300000 Sobic001G300000 Sobic008G045000--Sobic001G300000 Sobic006G112700 Sobic006G112700 Sobic008G045000--Sobic006G112700 Sobic009G188900--Sobic002G168000 Sobic009G188900--Sobic010G250400 Sobic009G188900--Sobic006G281900 Sobic001G199500 Sobic001G199500 Sobic009G188900--Sobic001G199500 Sobic009G188900--Sobic006G275500 Sobic001G425700 Sobic001G425700 Sobic009G188900--Sobic001G425700 Sobic001G290500 Sobic001G290500 Sobic009G188900--Sobic001G290500 Sobic009G188900--Sobic005G153000 Sobic009G188900--Sobic007G187700
Octagon: transcription factors


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