Gene annotation
Transcriptome id Sobic.004G177600.1
Synonym Sb04g022750
Functional annotation DDT domain containing protein, putative, expressed
UniProt C5XUS6
Pfam PF15613 PF15614 PF02791 PF10537
Panther DB PTHR15546 PTHR15546:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G08630 : DDT domain-containing protein
RAP-DB (Rice) LOC_Os02g35100.2 : DDT domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a031610 , Zm00025a020675
Brachypodium PNT68834
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G177600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G233000 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
2 Sobic.003G388000 tetratricopeptide repeat domain containing protein, expressed K03350: APC3, anaphase-promoting complex subunit 3
3 Sobic.003G221500 CENP-C1, putative, expressed -
4 Sobic.004G339700 expressed protein -
5 Sobic.008G063600 glycosyl hydrolase family protein 27, putative, expressed -
6 Sobic.004G256300 RNA polymerase Rpb4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4
7 Sobic.004G307900 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
8 Sobic.001G462600 retinoblastoma-binding protein-like, putative, expressed K14961: RBBP5, SWD1, COMPASS component SWD1
9 Sobic.004G322300 nucleotide binding protein, putative, expressed K03351: anaphase-promoting complex subunit 4
10 Sobic.005G120700 ThiF family domain containing protein, putative, expressed K10684: UBLE1A, ubiquitin-like 1-activating enzyme E1 A
11 Sobic.006G242500 CDT1B - Putative DNA replication initiation protein, expressed K10727: chromatin licensing and DNA replication factor 1
12 Sobic.005G150900 growth regulating factor protein, putative, expressed -
13 Sobic.004G006600 transcription factor jumonji, putative, expressed K15601: [histone H3]-dimethyl-L-lysine9 demethylase
14 Sobic.009G003700 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
15 Sobic.004G315500 RFC5 - Putative clamp loader of PCNA, replication factor C subunit 5, expressed K10756: replication factor C subunit 3/5
16 Sobic.002G142700 PPR repeat containing protein, putative, expressed -
17 Sobic.004G168300 E2F family transcription factor protein, putative, expressed K06620: transcription factor E2F3
18 Sobic.010G236200 RecF/RecN/SMC N terminal domain containing protein, expressed -
19 Sobic.001G191900 mitochondrial carrier protein, putative, expressed K15109: SLC25A20_29, CACT, CACL, solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29
20 Sobic.004G043750 - K16251: DNA-directed RNA polymerase V subunit 1


Gene co-expression network
sample Sobic004G177600 Sobic004G177600 Sobic010G233000 Sobic010G233000 Sobic004G177600--Sobic010G233000 Sobic003G388000 Sobic003G388000 Sobic004G177600--Sobic003G388000 Sobic003G221500 Sobic003G221500 Sobic004G177600--Sobic003G221500 Sobic004G339700 Sobic004G339700 Sobic004G177600--Sobic004G339700 Sobic008G063600 Sobic008G063600 Sobic004G177600--Sobic008G063600 Sobic004G256300 Sobic004G256300 Sobic004G177600--Sobic004G256300 Sobic004G307900 Sobic004G307900 Sobic004G177600--Sobic004G307900 Sobic001G462600 Sobic001G462600 Sobic004G177600--Sobic001G462600 Sobic004G322300 Sobic004G322300 Sobic004G177600--Sobic004G322300 Sobic009G032200 Sobic009G032200 Sobic010G233000--Sobic009G032200 Sobic004G006600 Sobic004G006600 Sobic010G233000--Sobic004G006600 Sobic004G043750 Sobic004G043750 Sobic010G233000--Sobic004G043750 Sobic001G484200 Sobic001G484200 Sobic010G233000--Sobic001G484200 Sobic010G233000--Sobic004G177600 Sobic010G236200 Sobic010G236200 Sobic010G233000--Sobic010G236200 Sobic008G057000 Sobic008G057000 Sobic010G233000--Sobic008G057000 Sobic010G215900 Sobic010G215900 Sobic010G233000--Sobic010G215900 Sobic010G233000--Sobic003G221500 Sobic002G371600 Sobic002G371600 Sobic003G388000--Sobic002G371600 Sobic003G388000--Sobic004G322300 Sobic002G160700 Sobic002G160700 Sobic003G388000--Sobic002G160700 Sobic004G030400 Sobic004G030400 Sobic003G388000--Sobic004G030400 Sobic003G388000--Sobic004G177600 Sobic003G396700 Sobic003G396700 Sobic003G388000--Sobic003G396700 Sobic010G188000 Sobic010G188000 Sobic003G388000--Sobic010G188000 Sobic001G340000 Sobic001G340000 Sobic003G388000--Sobic001G340000 Sobic001G475000 Sobic001G475000 Sobic003G388000--Sobic001G475000 Sobic003G221500--Sobic004G256300 Sobic002G142700 Sobic002G142700 Sobic003G221500--Sobic002G142700 Sobic003G004600 Sobic003G004600 Sobic003G221500--Sobic003G004600 Sobic003G221500--Sobic010G236200 Sobic003G221500--Sobic001G462600 Sobic006G245700 Sobic006G245700 Sobic003G221500--Sobic006G245700 Sobic003G221500--Sobic009G032200 Sobic010G154000 Sobic010G154000 Sobic003G221500--Sobic010G154000 Sobic003G222700 Sobic003G222700 Sobic003G221500--Sobic003G222700 Sobic004G339700--Sobic004G177600 Sobic006G242500 Sobic006G242500 Sobic004G339700--Sobic006G242500 Sobic003G231100 Sobic003G231100 Sobic004G339700--Sobic003G231100 Sobic003G072500 Sobic003G072500 Sobic004G339700--Sobic003G072500 Sobic001G143600 Sobic001G143600 Sobic004G339700--Sobic001G143600 Sobic003G250900 Sobic003G250900 Sobic004G339700--Sobic003G250900 Sobic002G039800 Sobic002G039800 Sobic004G339700--Sobic002G039800 Sobic003G431600 Sobic003G431600 Sobic004G339700--Sobic003G431600 Sobic007G076200 Sobic007G076200 Sobic004G339700--Sobic007G076200 Sobic001G027500 Sobic001G027500 Sobic008G063600--Sobic001G027500 Sobic002G168000 Sobic002G168000 Sobic008G063600--Sobic002G168000 Sobic009G012600 Sobic009G012600 Sobic008G063600--Sobic009G012600 Sobic008G063600--Sobic003G396700 Sobic009G045300 Sobic009G045300 Sobic008G063600--Sobic009G045300 Sobic003G188600 Sobic003G188600 Sobic008G063600--Sobic003G188600 Sobic003G129500 Sobic003G129500 Sobic008G063600--Sobic003G129500 Sobic008G045000 Sobic008G045000 Sobic008G063600--Sobic008G045000 Sobic009G188900 Sobic009G188900 Sobic008G063600--Sobic009G188900 Sobic004G256300--Sobic003G221500 Sobic004G256300--Sobic003G222700 Sobic004G256300--Sobic006G245700 Sobic007G022700 Sobic007G022700 Sobic004G256300--Sobic007G022700 Sobic001G229300 Sobic001G229300 Sobic004G256300--Sobic001G229300 Sobic004G256300--Sobic002G142700 Sobic001G487100 Sobic001G487100 Sobic004G256300--Sobic001G487100 Sobic001G467100 Sobic001G467100 Sobic004G256300--Sobic001G467100 Sobic004G256300--Sobic003G004600 Sobic003G393100 Sobic003G393100 Sobic004G307900--Sobic003G393100 Sobic001G377700 Sobic001G377700 Sobic004G307900--Sobic001G377700 Sobic003G369200 Sobic003G369200 Sobic004G307900--Sobic003G369200 Sobic009G184200 Sobic009G184200 Sobic004G307900--Sobic009G184200 Sobic003G423600 Sobic003G423600 Sobic004G307900--Sobic003G423600 Sobic006G281400 Sobic006G281400 Sobic004G307900--Sobic006G281400 Sobic002G290000 Sobic002G290000 Sobic004G307900--Sobic002G290000 Sobic004G156200 Sobic004G156200 Sobic004G307900--Sobic004G156200 Sobic002G204400 Sobic002G204400 Sobic004G307900--Sobic002G204400 Sobic001G462600--Sobic003G221500 Sobic006G188500 Sobic006G188500 Sobic001G462600--Sobic006G188500 Sobic001G462600--Sobic002G142700 Sobic001G462600--Sobic004G256300 Sobic003G128300 Sobic003G128300 Sobic001G462600--Sobic003G128300 Sobic001G462600--Sobic004G177600 Sobic001G462600--Sobic003G222700 Sobic006G212900 Sobic006G212900 Sobic001G462600--Sobic006G212900 Sobic004G315500 Sobic004G315500 Sobic001G462600--Sobic004G315500 Sobic004G322300--Sobic002G371600 Sobic004G322300--Sobic003G388000 Sobic004G322300--Sobic004G315500 Sobic009G134900 Sobic009G134900 Sobic004G322300--Sobic009G134900 Sobic010G081700 Sobic010G081700 Sobic004G322300--Sobic010G081700 Sobic006G178100 Sobic006G178100 Sobic004G322300--Sobic006G178100 Sobic008G111600 Sobic008G111600 Sobic004G322300--Sobic008G111600 Sobic004G322300--Sobic002G160700 Sobic003G306400 Sobic003G306400 Sobic004G322300--Sobic003G306400
Octagon: transcription factors


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