Gene annotation
Transcriptome id Sobic.005G150900.1
Synonym GRF1, Sb05g021480, AtGRF1
Functional annotation growth regulating factor protein, putative, expressed
UniProt A0A1B6PSN1
Pfam PF08880 PF08879
Panther DB PTHR31602 PTHR31602:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005634nucleus GO:0005524ATP binding GO:0006351transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT4G37740 : growth-regulating factor 2
RAP-DB (Rice) LOC_Os11g35030.1 : growth regulating factor protein, putative, expressed
MaizeGDB (Corn) Zm00025a015738
Brachypodium KQJ88219 , KQJ88218
Barley HORVU4Hr1G037480.12 , HORVU4Hr1G037480.13 , HORVU4Hr1G037480.10 , HORVU4Hr1G037480.11 , HORVU4Hr1G037480.14 , HORVU4Hr1G037480.1 , HORVU4Hr1G037480.2 , HORVU4Hr1G037480.3 , HORVU4Hr1G037480.4 , HORVU4Hr1G037480.5 , HORVU4Hr1G037480.6 , HORVU4Hr1G037480.7 , HORVU4Hr1G037480.8 , HORVU4Hr1G037480.9
Wheat -
Populus -


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cDNA sequences
Sobic.005G150900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G080550 - -
2 Sobic.006G137700 Spc97 / Spc98 family protein, putative, expressed K16569: TUBGCP2, gamma-tubulin complex component 2
3 Sobic.010G236200 RecF/RecN/SMC N terminal domain containing protein, expressed -
4 Sobic.004G315500 RFC5 - Putative clamp loader of PCNA, replication factor C subunit 5, expressed K10756: replication factor C subunit 3/5
5 Sobic.004G177600 DDT domain containing protein, putative, expressed -
6 Sobic.005G120700 ThiF family domain containing protein, putative, expressed K10684: UBLE1A, ubiquitin-like 1-activating enzyme E1 A
7 Sobic.001G542450 - -
8 Sobic.007G102500 - -
9 Sobic.003G361400 nsp1-like C-terminal region family protein, expressed K14306: NUP62, nuclear pore complex protein Nup62
10 Sobic.008G063600 glycosyl hydrolase family protein 27, putative, expressed -
11 Sobic.006G262501 - -
12 Sobic.002G263200 expressed protein -
13 Sobic.004G010500 OsFBX52 - F-box domain containing protein, expressed -
14 Sobic.002G016600 OsFBD13 - F-box and FBD domain containing protein, expressed -
15 Sobic.010G051400 zinc finger protein, putative, expressed K04706: E3 SUMO-protein ligase PIAS1
16 Sobic.004G078500 Leucine Rich Repeat family protein, expressed -
17 Sobic.001G440100 cell cycle checkpoint protein RAD17, putative, expressed K06662: HRAD17, cell cycle checkpoint protein
18 Sobic.008G045000 expressed protein -
19 Sobic.001G239800 3-5 exonuclease family protein, putative, expressed K12591: RRP6, exosome complex exonuclease RRP6
20 Sobic.010G038100 OsFBDUF30 - F-box and DUF domain containing protein, expressed -


Gene co-expression network
sample Sobic005G150900 Sobic005G150900 Sobic010G080550 Sobic010G080550 Sobic005G150900--Sobic010G080550 Sobic006G137700 Sobic006G137700 Sobic005G150900--Sobic006G137700 Sobic010G236200 Sobic010G236200 Sobic005G150900--Sobic010G236200 Sobic004G315500 Sobic004G315500 Sobic005G150900--Sobic004G315500 Sobic004G177600 Sobic004G177600 Sobic005G150900--Sobic004G177600 Sobic005G120700 Sobic005G120700 Sobic005G150900--Sobic005G120700 Sobic001G542450 Sobic001G542450 Sobic005G150900--Sobic001G542450 Sobic007G102500 Sobic007G102500 Sobic005G150900--Sobic007G102500 Sobic003G361400 Sobic003G361400 Sobic005G150900--Sobic003G361400 Sobic009G098300 Sobic009G098300 Sobic010G080550--Sobic009G098300 Sobic002G127200 Sobic002G127200 Sobic010G080550--Sobic002G127200 Sobic001G014300 Sobic001G014300 Sobic010G080550--Sobic001G014300 Sobic005G108000 Sobic005G108000 Sobic010G080550--Sobic005G108000 Sobic004G149700 Sobic004G149700 Sobic010G080550--Sobic004G149700 Sobic006G216200 Sobic006G216200 Sobic010G080550--Sobic006G216200 Sobic004G223300 Sobic004G223300 Sobic010G080550--Sobic004G223300 Sobic001G245000 Sobic001G245000 Sobic010G080550--Sobic001G245000 Sobic006G154100 Sobic006G154100 Sobic010G080550--Sobic006G154100 Sobic001G488100 Sobic001G488100 Sobic006G137700--Sobic001G488100 Sobic006G137700--Sobic004G315500 Sobic005G010900 Sobic005G010900 Sobic006G137700--Sobic005G010900 Sobic002G327000 Sobic002G327000 Sobic006G137700--Sobic002G327000 Sobic010G114900 Sobic010G114900 Sobic006G137700--Sobic010G114900 Sobic006G137700--Sobic004G149700 Sobic009G134900 Sobic009G134900 Sobic006G137700--Sobic009G134900 Sobic001G373000 Sobic001G373000 Sobic006G137700--Sobic001G373000 Sobic007G051700 Sobic007G051700 Sobic006G137700--Sobic007G051700 Sobic009G032200 Sobic009G032200 Sobic010G236200--Sobic009G032200 Sobic010G269300 Sobic010G269300 Sobic010G236200--Sobic010G269300 Sobic010G149600 Sobic010G149600 Sobic010G236200--Sobic010G149600 Sobic004G043750 Sobic004G043750 Sobic010G236200--Sobic004G043750 Sobic003G221500 Sobic003G221500 Sobic010G236200--Sobic003G221500 Sobic004G111000 Sobic004G111000 Sobic010G236200--Sobic004G111000 Sobic002G254800 Sobic002G254800 Sobic010G236200--Sobic002G254800 Sobic009G257500 Sobic009G257500 Sobic010G236200--Sobic009G257500 Sobic007G125700 Sobic007G125700 Sobic010G236200--Sobic007G125700 Sobic004G315500--Sobic001G488100 Sobic004G315500--Sobic005G010900 Sobic004G315500--Sobic001G373000 Sobic010G188000 Sobic010G188000 Sobic004G315500--Sobic010G188000 Sobic004G322300 Sobic004G322300 Sobic004G315500--Sobic004G322300 Sobic004G315500--Sobic006G137700 Sobic001G239800 Sobic001G239800 Sobic004G315500--Sobic001G239800 Sobic007G089800 Sobic007G089800 Sobic004G315500--Sobic007G089800 Sobic003G123100 Sobic003G123100 Sobic004G315500--Sobic003G123100 Sobic010G233000 Sobic010G233000 Sobic004G177600--Sobic010G233000 Sobic003G388000 Sobic003G388000 Sobic004G177600--Sobic003G388000 Sobic004G177600--Sobic003G221500 Sobic004G339700 Sobic004G339700 Sobic004G177600--Sobic004G339700 Sobic008G063600 Sobic008G063600 Sobic004G177600--Sobic008G063600 Sobic004G256300 Sobic004G256300 Sobic004G177600--Sobic004G256300 Sobic004G307900 Sobic004G307900 Sobic004G177600--Sobic004G307900 Sobic001G462600 Sobic001G462600 Sobic004G177600--Sobic001G462600 Sobic004G177600--Sobic004G322300 Sobic005G120700--Sobic010G269300 Sobic002G430900 Sobic002G430900 Sobic005G120700--Sobic002G430900 Sobic004G287100 Sobic004G287100 Sobic005G120700--Sobic004G287100 Sobic002G017900 Sobic002G017900 Sobic005G120700--Sobic002G017900 Sobic005G120700--Sobic004G256300 Sobic003G222700 Sobic003G222700 Sobic005G120700--Sobic003G222700 Sobic003G360300 Sobic003G360300 Sobic005G120700--Sobic003G360300 Sobic006G245700 Sobic006G245700 Sobic005G120700--Sobic006G245700 Sobic002G252100 Sobic002G252100 Sobic005G120700--Sobic002G252100 Sobic008G002300 Sobic008G002300 Sobic001G542450--Sobic008G002300 Sobic003G416700 Sobic003G416700 Sobic001G542450--Sobic003G416700 Sobic002G145800 Sobic002G145800 Sobic001G542450--Sobic002G145800 Sobic003G217200 Sobic003G217200 Sobic001G542450--Sobic003G217200 Sobic003G062300 Sobic003G062300 Sobic001G542450--Sobic003G062300 Sobic006G224800 Sobic006G224800 Sobic001G542450--Sobic006G224800 Sobic002G295500 Sobic002G295500 Sobic001G542450--Sobic002G295500 Sobic001G461400 Sobic001G461400 Sobic001G542450--Sobic001G461400 Sobic006G166200 Sobic006G166200 Sobic001G542450--Sobic006G166200 Sobic006G245900 Sobic006G245900 Sobic007G102500--Sobic006G245900 Sobic004G010500 Sobic004G010500 Sobic007G102500--Sobic004G010500 Sobic007G102500--Sobic002G252100 Sobic007G102500--Sobic003G123100 Sobic004G247100 Sobic004G247100 Sobic007G102500--Sobic004G247100 Sobic007G102500--Sobic002G127200 Sobic010G262100 Sobic010G262100 Sobic007G102500--Sobic010G262100 Sobic002G043000 Sobic002G043000 Sobic007G102500--Sobic002G043000 Sobic006G112700 Sobic006G112700 Sobic007G102500--Sobic006G112700 Sobic003G259600 Sobic003G259600 Sobic003G361400--Sobic003G259600 Sobic003G361400--Sobic001G373000 Sobic002G219900 Sobic002G219900 Sobic003G361400--Sobic002G219900 Sobic004G038100 Sobic004G038100 Sobic003G361400--Sobic004G038100 Sobic001G013300 Sobic001G013300 Sobic003G361400--Sobic001G013300 Sobic003G361400--Sobic002G043000 Sobic001G033900 Sobic001G033900 Sobic003G361400--Sobic001G033900 Sobic002G372500 Sobic002G372500 Sobic003G361400--Sobic002G372500 Sobic003G361400--Sobic003G360300
Octagon: transcription factors


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