Gene annotation
Transcriptome id Sobic.005G120700.1
Synonym SAE1A, Sb05g017710, ATSAE1A, AT-SAE1-1
Functional annotation ThiF family domain containing protein, putative, expressed
UniProt C5Y2L6
Pfam PF00899
Panther DB PTHR10953
NCBI CDD KOG2014; SMT3/SUMO-activating complex, AOS1/RAD31 component
KEGG Orthology K10684; UBLE1A, ubiquitin-like 1-activating enzyme E1 A
Gene Ontology GO:0008641; ubiquitin-like modifier activating enzyme activity


Orthologs (automatic annotation)
TAIR AT4G24940 : SUMO-activating enzyme 1A
RAP-DB (Rice) LOC_Os11g30410.1 : ThiF family domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a029715
Brachypodium KQJ88493 , KQJ88492
Barley HORVU2Hr1G027820.1 , HORVU2Hr1G027820.2 , HORVU7Hr1G089410.1 , HORVU7Hr1G089410.3 , HORVU7Hr1G089410.2 , HORVU3Hr1G016090.4 , HORVU3Hr1G016090.1 , HORVU3Hr1G016090.3 , HORVU3Hr1G016090.2 , HORVU3Hr1G016010.5 , HORVU3Hr1G016010.4 , HORVU3Hr1G016010.7 , HORVU3Hr1G016010.6 , HORVU3Hr1G016010.1 , HORVU3Hr1G016010.3 , HORVU3Hr1G016010.2 , HORVU3Hr1G016010.9 , HORVU3Hr1G016010.8
Wheat TraesCS3D02G090000 , TraesCS3D02G090000 , TraesCS3D02G090000 , TraesCS3B02G105300 , TraesCS3B02G105300 , TraesCS3B02G105300 , TraesCS7A02G352700 , TraesCS7A02G352700 , TraesCS7A02G352700 , TraesCS7D02G370300 , TraesCS7D02G370300 , TraesCS3A02G090000 , TraesCS3A02G090000 , TraesCS3A02G090000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G269300 hydrolase, acting on carbon-nitrogen, putative, expressed -
2 Sobic.002G430900 PWWP domain containing protein, expressed -
3 Sobic.004G287100 tRNA pseudouridine synthase family protein, putative, expressed K06173: truA, tRNA pseudouridine38-40 synthase
4 Sobic.002G017900 tetratricopeptide repeat containing protein, putative, expressed K11291: nuclear autoantigenic sperm protein
5 Sobic.004G256300 RNA polymerase Rpb4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4
6 Sobic.003G222700 similar to DEAD-box ATP-dependent RNA helicase 26(PubMedID : 29862293)@- K17679: ATP-dependent RNA helicase MSS116, mitochondrial
7 Sobic.003G360300 exostosin family domain containing protein, expressed -
8 Sobic.006G245700 COP9 signalosome complex subunit 5b, putative, expressed K09613: COPS5, COP9 signalosome complex subunit 5
9 Sobic.002G252100 methyl-binding domain protein MBD, putative, expressed -
10 Sobic.002G177500 expressed protein -
11 Sobic.004G277400 glucosyltransferase, putative, expressed K03849: alpha-1,3-glucosyltransferase
12 Sobic.002G357100 SUMO-activating enzyme subunit 2, putative, expressed K10685: UBLE1B, SAE2, ubiquitin-like 1-activating enzyme E1 B
13 Sobic.006G067600 histone deacetylase, putative, expressed K06067: histone deacetylase 1/2
14 Sobic.010G172400 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
15 Sobic.006G265600 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
16 Sobic.004G198900 expressed protein -
17 Sobic.004G285000 MT-A70 domain containing protein, expressed K05925: mRNA m6A methyltransferase catalytic subunit
18 Sobic.003G259600 ORC4 - Putative origin recognition complex subunit 4, expressed K02606: origin recognition complex subunit 4
19 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
20 Sobic.001G370300 WD domain, G-beta repeat domain containing protein, expressed K12662: PRPF4, U4/U6 small nuclear ribonucleoprotein PRP4


Gene co-expression network
sample Sobic005G120700 Sobic005G120700 Sobic010G269300 Sobic010G269300 Sobic005G120700--Sobic010G269300 Sobic002G430900 Sobic002G430900 Sobic005G120700--Sobic002G430900 Sobic004G287100 Sobic004G287100 Sobic005G120700--Sobic004G287100 Sobic002G017900 Sobic002G017900 Sobic005G120700--Sobic002G017900 Sobic004G256300 Sobic004G256300 Sobic005G120700--Sobic004G256300 Sobic003G222700 Sobic003G222700 Sobic005G120700--Sobic003G222700 Sobic003G360300 Sobic003G360300 Sobic005G120700--Sobic003G360300 Sobic006G245700 Sobic006G245700 Sobic005G120700--Sobic006G245700 Sobic002G252100 Sobic002G252100 Sobic005G120700--Sobic002G252100 Sobic007G125700 Sobic007G125700 Sobic010G269300--Sobic007G125700 Sobic010G269300--Sobic002G430900 Sobic002G263700 Sobic002G263700 Sobic010G269300--Sobic002G263700 Sobic001G123600 Sobic001G123600 Sobic010G269300--Sobic001G123600 Sobic010G269300--Sobic003G360300 Sobic008G080500 Sobic008G080500 Sobic010G269300--Sobic008G080500 Sobic010G236200 Sobic010G236200 Sobic010G269300--Sobic010G236200 Sobic010G279900 Sobic010G279900 Sobic010G269300--Sobic010G279900 Sobic009G032200 Sobic009G032200 Sobic010G269300--Sobic009G032200 Sobic002G430900--Sobic007G125700 Sobic002G219900 Sobic002G219900 Sobic002G430900--Sobic002G219900 Sobic002G430900--Sobic010G269300 Sobic010G149600 Sobic010G149600 Sobic002G430900--Sobic010G149600 Sobic009G192500 Sobic009G192500 Sobic002G430900--Sobic009G192500 Sobic002G430900--Sobic002G017900 Sobic001G395200 Sobic001G395200 Sobic002G430900--Sobic001G395200 Sobic009G006900 Sobic009G006900 Sobic002G430900--Sobic009G006900 Sobic002G430900--Sobic005G120700 Sobic007G209600 Sobic007G209600 Sobic004G287100--Sobic007G209600 Sobic004G287100--Sobic005G120700 Sobic001G061800 Sobic001G061800 Sobic004G287100--Sobic001G061800 Sobic001G033000 Sobic001G033000 Sobic004G287100--Sobic001G033000 Sobic002G318600 Sobic002G318600 Sobic004G287100--Sobic002G318600 Sobic001G210000 Sobic001G210000 Sobic004G287100--Sobic001G210000 Sobic004G287100--Sobic002G430900 Sobic010G250800 Sobic010G250800 Sobic004G287100--Sobic010G250800 Sobic001G122100 Sobic001G122100 Sobic004G287100--Sobic001G122100 Sobic002G017900--Sobic002G430900 Sobic004G198900 Sobic004G198900 Sobic002G017900--Sobic004G198900 Sobic002G017900--Sobic005G120700 Sobic002G017900--Sobic007G125700 Sobic003G274400 Sobic003G274400 Sobic002G017900--Sobic003G274400 Sobic002G017900--Sobic009G006900 Sobic002G177500 Sobic002G177500 Sobic002G017900--Sobic002G177500 Sobic002G339800 Sobic002G339800 Sobic002G017900--Sobic002G339800 Sobic004G207000 Sobic004G207000 Sobic002G017900--Sobic004G207000 Sobic003G221500 Sobic003G221500 Sobic004G256300--Sobic003G221500 Sobic004G256300--Sobic003G222700 Sobic004G256300--Sobic006G245700 Sobic007G022700 Sobic007G022700 Sobic004G256300--Sobic007G022700 Sobic001G229300 Sobic001G229300 Sobic004G256300--Sobic001G229300 Sobic002G142700 Sobic002G142700 Sobic004G256300--Sobic002G142700 Sobic001G487100 Sobic001G487100 Sobic004G256300--Sobic001G487100 Sobic001G467100 Sobic001G467100 Sobic004G256300--Sobic001G467100 Sobic003G004600 Sobic003G004600 Sobic004G256300--Sobic003G004600 Sobic003G222700--Sobic004G256300 Sobic003G222700--Sobic001G467100 Sobic010G172400 Sobic010G172400 Sobic003G222700--Sobic010G172400 Sobic001G061200 Sobic001G061200 Sobic003G222700--Sobic001G061200 Sobic003G222700--Sobic007G022700 Sobic007G173700 Sobic007G173700 Sobic003G222700--Sobic007G173700 Sobic003G222700--Sobic001G229300 Sobic003G222700--Sobic002G142700 Sobic002G399900 Sobic002G399900 Sobic003G222700--Sobic002G399900 Sobic003G259600 Sobic003G259600 Sobic003G360300--Sobic003G259600 Sobic003G360300--Sobic001G123600 Sobic003G360300--Sobic010G269300 Sobic007G047600 Sobic007G047600 Sobic003G360300--Sobic007G047600 Sobic006G179300 Sobic006G179300 Sobic003G360300--Sobic006G179300 Sobic003G360300--Sobic002G142700 Sobic004G342300 Sobic004G342300 Sobic003G360300--Sobic004G342300 Sobic004G277400 Sobic004G277400 Sobic003G360300--Sobic004G277400 Sobic003G360300--Sobic008G080500 Sobic006G245700--Sobic004G256300 Sobic001G370300 Sobic001G370300 Sobic006G245700--Sobic001G370300 Sobic008G125000 Sobic008G125000 Sobic006G245700--Sobic008G125000 Sobic006G245700--Sobic003G274400 Sobic001G115500 Sobic001G115500 Sobic006G245700--Sobic001G115500 Sobic002G394800 Sobic002G394800 Sobic006G245700--Sobic002G394800 Sobic001G436300 Sobic001G436300 Sobic006G245700--Sobic001G436300 Sobic006G245700--Sobic003G221500 Sobic001G157600 Sobic001G157600 Sobic006G245700--Sobic001G157600 Sobic006G245900 Sobic006G245900 Sobic002G252100--Sobic006G245900 Sobic003G123100 Sobic003G123100 Sobic002G252100--Sobic003G123100 Sobic001G239800 Sobic001G239800 Sobic002G252100--Sobic001G239800 Sobic001G346900 Sobic001G346900 Sobic002G252100--Sobic001G346900 Sobic002G371600 Sobic002G371600 Sobic002G252100--Sobic002G371600 Sobic006G270600 Sobic006G270600 Sobic002G252100--Sobic006G270600 Sobic001G098400 Sobic001G098400 Sobic002G252100--Sobic001G098400 Sobic004G315500 Sobic004G315500 Sobic002G252100--Sobic004G315500 Sobic007G014800 Sobic007G014800 Sobic002G252100--Sobic007G014800
Octagon: transcription factors


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